BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000821-TA|BGIBMGA000821-PA|IPR006802|Radial spokehead-like protein (257 letters) Database: tribolium 317 sequences; 114,650 total letters Searching....................................................done Score E Sequences producing significant alignments: (bits) Value AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 27 0.19 U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 23 1.7 U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 22 4.0 AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 5.3 AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 5.3 AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 7.0 >AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix transcription factor protein. Length = 249 Score = 26.6 bits (56), Expect = 0.19 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Query: 196 NYGPAQLPRPQDEYPIGPEVMEMADPTFADEEAYR 230 NY P+Q P P+ P+ V +PT +E+ +R Sbjct: 215 NYSPSQSPEPESVRPLSLVVRRCEEPT--EEKPWR 247 >U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. Length = 425 Score = 23.4 bits (48), Expect = 1.7 Identities = 8/19 (42%), Positives = 10/19 (52%) Query: 203 PRPQDEYPIGPEVMEMADP 221 P P E P+ PE +A P Sbjct: 80 PEPDPEIPVAPEPAPLASP 98 >U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor homolog protein. Length = 276 Score = 22.2 bits (45), Expect = 4.0 Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 51 PPPEIPVERPGQGVNKKV 68 PP IP++ PG +N V Sbjct: 185 PPAGIPLQNPGLNLNPPV 202 >AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase protein. Length = 1464 Score = 21.8 bits (44), Expect = 5.3 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query: 151 SSSLTPERAVAALRSNLWPGAAAFATSGQKSECMYIGWGLKF 192 SS+ PE+ + N++ T G + + YI WG+KF Sbjct: 20 SSTQMPEKVRE--KWNVFDDPPREPTVGSEVKRTYIEWGVKF 59 >AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2 protein. Length = 1464 Score = 21.8 bits (44), Expect = 5.3 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query: 151 SSSLTPERAVAALRSNLWPGAAAFATSGQKSECMYIGWGLKF 192 SS+ PE+ + N++ T G + + YI WG+KF Sbjct: 20 SSTQMPEKVRE--KWNVFDDPPREPTVGSEVKRTYIEWGVKF 59 >AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain transcription factor Prothoraxlessprotein. Length = 323 Score = 21.4 bits (43), Expect = 7.0 Identities = 10/24 (41%), Positives = 12/24 (50%) Query: 197 YGPAQLPRPQDEYPIGPEVMEMAD 220 YGP Q Q+ P P M MA+ Sbjct: 97 YGPQQQMDGQEYRPDSPSSMHMAN 120 Database: tribolium Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 114,650 Number of sequences in database: 317 Lambda K H 0.317 0.133 0.432 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 45,414 Number of Sequences: 317 Number of extensions: 1743 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of query: 257 length of database: 114,650 effective HSP length: 55 effective length of query: 202 effective length of database: 97,215 effective search space: 19637430 effective search space used: 19637430 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 42 (21.0 bits)
- SilkBase 1999-2023 -