GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000820-TA|BGIBMGA000820-PA|IPR006802|Radial
spokehead-like protein
         (177 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    24   2.3  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    24   3.0  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   7.0  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   7.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    22   9.3  

>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 10  DHLVDVVQKILSQKPPDVVDH 30
           DHL D +Q++ S+ PP+ + +
Sbjct: 208 DHLFDHMQEVWSKIPPETIQN 228


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 36  WQVKQEKFRPNFDLLNDVYLSPPQLAVVRRIEEMFRLVK 74
           WQVK      NF + ND+  +    A V+  +E  + VK
Sbjct: 316 WQVKSGTIFDNFMITNDLEEAKKVAASVKETQEGEKKVK 354


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 5  PSSRYDHLVDVVQKILSQKPPDVVDHFEQYSWQVKQEKFRPNFDLLND 52
          PS+  D L+ +   I SQK     + +++ +  + + + +P  D + D
Sbjct: 33 PSNEVDLLIQIGNGIFSQKGTKFDERYDKLAKDLYKSELKP-LDFVGD 79


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query: 9   YDHLVDVVQKILSQKPPDVVDHFEQ 33
           +D   ++  ++  + PPD V+ FE+
Sbjct: 154 FDKFEEIQVRVSGENPPDHVESFER 178


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)

Query: 13  VDVVQKILSQKPPDVVDH 30
           VDV+Q ++  K P+V+ H
Sbjct: 945 VDVIQVVVPVKAPNVLPH 962


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.139    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,939
Number of Sequences: 2123
Number of extensions: 5077
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 5
length of query: 177
length of database: 516,269
effective HSP length: 60
effective length of query: 117
effective length of database: 388,889
effective search space: 45500013
effective search space used: 45500013
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 45 (22.2 bits)