GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000820-TA|BGIBMGA000820-PA|IPR006802|Radial
spokehead-like protein
         (177 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094708-1|AAM11061.1|  708|Drosophila melanogaster GH13165p pro...    62   5e-10
AE013599-3771|AAF47136.1|  708|Drosophila melanogaster CG3121-PA...    62   5e-10

>AY094708-1|AAM11061.1|  708|Drosophila melanogaster GH13165p
           protein.
          Length = 708

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 12/161 (7%)

Query: 9   YDHLVDVVQKILSQKPPDVVDHFEQYSWQVKQEKFR-PNFDLLNDVYLSPPQLAVVRRIE 67
           +DHL D++++++ ++PP+V+D FE++S  V+++KF  P     + V+       V ++I 
Sbjct: 103 FDHLSDIIKRVIDERPPNVIDFFEEFSRNVREQKFHLPERFPPSGVFDEVRSFRVAKKIL 162

Query: 68  EMFRLVKSXXXXXXXXXXXXXXXXXXXXNVKPRIADLI-----------DSNYYFKECGF 116
           +  +L                       +++  I D +              +Y+ +CGF
Sbjct: 163 QSMKLPYVVEGEDLMGEDLSVEDLRTNEDMRIVIDDSMRYFVTFNERVQQLQFYWTQCGF 222

Query: 117 GLPDSECYAVYIALNMLAIKEPVSTVRFFGKIYGTKENYYV 157
            + + + + +  A+N L     +   RF+G I G K +YY+
Sbjct: 223 SISNDDIFQLASAMNRLQTHPSIMQCRFWGCINGLKASYYI 263


>AE013599-3771|AAF47136.1|  708|Drosophila melanogaster CG3121-PA
           protein.
          Length = 708

 Score = 61.7 bits (143), Expect = 5e-10
 Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 12/161 (7%)

Query: 9   YDHLVDVVQKILSQKPPDVVDHFEQYSWQVKQEKFR-PNFDLLNDVYLSPPQLAVVRRIE 67
           +DHL D++++++ ++PP+V+D FE++S  V+++KF  P     + V+       V ++I 
Sbjct: 103 FDHLSDIIKRVIDERPPNVIDFFEEFSRNVREQKFHLPERFPPSGVFDEVRSFRVAKKIL 162

Query: 68  EMFRLVKSXXXXXXXXXXXXXXXXXXXXNVKPRIADLI-----------DSNYYFKECGF 116
           +  +L                       +++  I D +              +Y+ +CGF
Sbjct: 163 QSMKLPYVVEGEDLMGEDLSVEDLRTNEDMRIVIDDSMRYFVTFNERVQQLQFYWTQCGF 222

Query: 117 GLPDSECYAVYIALNMLAIKEPVSTVRFFGKIYGTKENYYV 157
            + + + + +  A+N L     +   RF+G I G K +YY+
Sbjct: 223 SISNDDIFQLASAMNRLQTHPSIMQCRFWGCINGLKASYYI 263


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.139    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,388,150
Number of Sequences: 52641
Number of extensions: 248536
Number of successful extensions: 476
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 472
Number of HSP's gapped (non-prelim): 4
length of query: 177
length of database: 24,830,863
effective HSP length: 80
effective length of query: 97
effective length of database: 20,619,583
effective search space: 2000099551
effective search space used: 2000099551
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 59 (27.9 bits)