SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000819-TA|BGIBMGA000819-PA|IPR001509|NAD-dependent
epimerase/dehydratase
         (212 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D32143-1|BAA06874.1|  206|Homo sapiens biliverdin-IXbeta reducta...   165   8e-41
D26308-1|BAA05370.1|  206|Homo sapiens NADPH-flavin reductase pr...   165   8e-41
BC109371-1|AAI09372.1|  206|Homo sapiens biliverdin reductase B ...   165   8e-41
AY340485-1|AAP88933.1|  206|Homo sapiens biliverdin reductase B ...   165   8e-41
U60819-1|AAB39829.1|  685|Homo sapiens rBAT protein.                   33   0.97 
M95548-1|AAA35500.1|  685|Homo sapiens amino acid transport prot...    33   0.97 
L11696-1|AAA81778.1|  685|Homo sapiens amino acid transport rela...    33   0.97 
D82326-1|BAA11541.1|  685|Homo sapiens Na+-independent neutral a...    33   0.97 
DQ023517-1|AAY89648.1|  551|Homo sapiens SLC3A1 variant G protein.     33   0.97 
DQ023516-1|AAY89647.1|  564|Homo sapiens SLC3A1 variant F protein.     33   0.97 
DQ023515-1|AAY89646.1|  502|Homo sapiens SLC3A1 variant E protein.     33   0.97 
DQ023513-1|AAY89644.1|  391|Homo sapiens SLC3A1 variant C protein.     33   0.97 
BC093626-1|AAH93626.1|  685|Homo sapiens solute carrier family 3...    33   0.97 
BC093624-1|AAH93624.1|  685|Homo sapiens solute carrier family 3...    33   0.97 
BC022386-1|AAH22386.1|  685|Homo sapiens solute carrier family 3...    33   0.97 
AK223146-1|BAD96866.1|  685|Homo sapiens solute carrier family 3...    33   0.97 
AC013717-2|AAX88955.1|  685|Homo sapiens unknown protein.              33   0.97 
AB033549-1|BAB16841.1|  685|Homo sapiens hrBAT protein.                33   0.97 
BC007364-1|AAH07364.1|  299|Homo sapiens NmrA-like family domain...    32   1.7  
BC002927-1|AAH02927.1|  299|Homo sapiens NMRAL1 protein protein.       32   1.7  
AF225419-1|AAG09721.1|  299|Homo sapiens HSCARG protein.               32   1.7  

>D32143-1|BAA06874.1|  206|Homo sapiens biliverdin-IXbeta reductase
           I protein.
          Length = 206

 Score =  165 bits (402), Expect = 8e-41
 Identities = 81/192 (42%), Positives = 116/192 (60%)

Query: 1   MKKVVIFGSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVH 60
           +KK+ IFG+TG  GL  +  A++ G EV   VRD ++LP        +V G+VL+   V 
Sbjct: 3   VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVD 62

Query: 61  EAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVP 120
           + V G DAV++ LGTRNDL+PT+ +SEG +NI+ AM+A  V  V AC SAFL ++  KVP
Sbjct: 63  KTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP 122

Query: 121 PIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLG 180
           P    + +DH RM + L++SGL ++A  PPH  D P           + P R I+K DLG
Sbjct: 123 PRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLG 182

Query: 181 TFLVDALSEPKY 192
            F++  L+  +Y
Sbjct: 183 HFMLRCLTTDEY 194


>D26308-1|BAA05370.1|  206|Homo sapiens NADPH-flavin reductase
           protein.
          Length = 206

 Score =  165 bits (402), Expect = 8e-41
 Identities = 81/192 (42%), Positives = 116/192 (60%)

Query: 1   MKKVVIFGSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVH 60
           +KK+ IFG+TG  GL  +  A++ G EV   VRD ++LP        +V G+VL+   V 
Sbjct: 3   VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVD 62

Query: 61  EAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVP 120
           + V G DAV++ LGTRNDL+PT+ +SEG +NI+ AM+A  V  V AC SAFL ++  KVP
Sbjct: 63  KTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP 122

Query: 121 PIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLG 180
           P    + +DH RM + L++SGL ++A  PPH  D P           + P R I+K DLG
Sbjct: 123 PRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLG 182

Query: 181 TFLVDALSEPKY 192
            F++  L+  +Y
Sbjct: 183 HFMLRCLTTDEY 194


>BC109371-1|AAI09372.1|  206|Homo sapiens biliverdin reductase B
           (flavin reductase (NADPH)) protein.
          Length = 206

 Score =  165 bits (402), Expect = 8e-41
 Identities = 81/192 (42%), Positives = 116/192 (60%)

Query: 1   MKKVVIFGSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVH 60
           +KK+ IFG+TG  GL  +  A++ G EV   VRD ++LP        +V G+VL+   V 
Sbjct: 3   VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVD 62

Query: 61  EAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVP 120
           + V G DAV++ LGTRNDL+PT+ +SEG +NI+ AM+A  V  V AC SAFL ++  KVP
Sbjct: 63  KTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP 122

Query: 121 PIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLG 180
           P    + +DH RM + L++SGL ++A  PPH  D P           + P R I+K DLG
Sbjct: 123 PRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLG 182

Query: 181 TFLVDALSEPKY 192
            F++  L+  +Y
Sbjct: 183 HFMLRCLTTDEY 194


>AY340485-1|AAP88933.1|  206|Homo sapiens biliverdin reductase B
           (flavin reductase (NADPH)) protein.
          Length = 206

 Score =  165 bits (402), Expect = 8e-41
 Identities = 81/192 (42%), Positives = 116/192 (60%)

Query: 1   MKKVVIFGSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVH 60
           +KK+ IFG+TG  GL  +  A++ G EV   VRD ++LP        +V G+VL+   V 
Sbjct: 3   VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVD 62

Query: 61  EAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVP 120
           + V G DAV++ LGTRNDL+PT+ +SEG +NI+ AM+A  V  V AC SAFL ++  KVP
Sbjct: 63  KTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP 122

Query: 121 PIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLG 180
           P    + +DH RM + L++SGL ++A  PPH  D P           + P R I+K DLG
Sbjct: 123 PRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLG 182

Query: 181 TFLVDALSEPKY 192
            F++  L+  +Y
Sbjct: 183 HFMLRCLTTDEY 194


>U60819-1|AAB39829.1|  685|Homo sapiens rBAT protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>M95548-1|AAA35500.1|  685|Homo sapiens amino acid transport protein
           protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>L11696-1|AAA81778.1|  685|Homo sapiens amino acid transport related
           protein protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>D82326-1|BAA11541.1|  685|Homo sapiens Na+-independent neutral and
           basic amino acid transporter protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>DQ023517-1|AAY89648.1|  551|Homo sapiens SLC3A1 variant G protein.
          Length = 551

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>DQ023516-1|AAY89647.1|  564|Homo sapiens SLC3A1 variant F protein.
          Length = 564

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>DQ023515-1|AAY89646.1|  502|Homo sapiens SLC3A1 variant E protein.
          Length = 502

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>DQ023513-1|AAY89644.1|  391|Homo sapiens SLC3A1 variant C protein.
          Length = 391

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>BC093626-1|AAH93626.1|  685|Homo sapiens solute carrier family 3,
           member 1 protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>BC093624-1|AAH93624.1|  685|Homo sapiens solute carrier family 3
           (cystine, dibasic and neutral amino acid transporters,
           protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>BC022386-1|AAH22386.1|  685|Homo sapiens solute carrier family 3
           (cystine, dibasic and neutral amino acid transporters,
           protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>AK223146-1|BAD96866.1|  685|Homo sapiens solute carrier family 3,
           member 1 variant protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>AC013717-2|AAX88955.1|  685|Homo sapiens unknown protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>AB033549-1|BAB16841.1|  685|Homo sapiens hrBAT protein.
          Length = 685

 Score = 32.7 bits (71), Expect = 0.97
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)

Query: 87  EGTKNIIDAMRAKNVKTV------SACLSAFLFYEQE--KVPPIFVNLNEDHKRMFQALK 138
           +G ++ +D + A N+KTV       + L  F +  ++  +V PIF  + ED + +  A+ 
Sbjct: 143 KGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDFREVDPIFGTM-EDFENLVAAIH 201

Query: 139 DSGLNWIAAFPPHFTDD 155
           D GL  I  F P+ T D
Sbjct: 202 DKGLKLIIDFIPNHTSD 218


>BC007364-1|AAH07364.1|  299|Homo sapiens NmrA-like family domain
           containing 1 protein.
          Length = 299

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   KKVVIFGSTGVIGLNAVEAALKKG-LEVRAFVRDPAK--LPEHLKDKVEIVKGNVLEPDS 58
           K VV+FG TG  G +     L+ G  +VR   R+P K    E      E+V+G+  +   
Sbjct: 5   KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVI 64

Query: 59  VHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMR 97
           +  A+ G  A  I        +   ++ +G K + D  R
Sbjct: 65  MELALNGAYATFIVTNYWESCSQEQEVKQG-KLLADLAR 102


>BC002927-1|AAH02927.1|  299|Homo sapiens NMRAL1 protein protein.
          Length = 299

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   KKVVIFGSTGVIGLNAVEAALKKG-LEVRAFVRDPAK--LPEHLKDKVEIVKGNVLEPDS 58
           K VV+FG TG  G +     L+ G  +VR   R+P K    E      E+V+G+  +   
Sbjct: 5   KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVI 64

Query: 59  VHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMR 97
           +  A+ G  A  I        +   ++ +G K + D  R
Sbjct: 65  MELALNGAYATFIVTNYWESCSQEQEVKQG-KLLADLAR 102


>AF225419-1|AAG09721.1|  299|Homo sapiens HSCARG protein.
          Length = 299

 Score = 31.9 bits (69), Expect = 1.7
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   KKVVIFGSTGVIGLNAVEAALKKG-LEVRAFVRDPAK--LPEHLKDKVEIVKGNVLEPDS 58
           K VV+FG TG  G +     L+ G  +VR   R+P K    E      E+V+G+  +   
Sbjct: 5   KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVI 64

Query: 59  VHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMR 97
           +  A+ G  A  I        +   ++ +G K + D  R
Sbjct: 65  MELALNGAYATFIVTNYWESCSQEQEVKQG-KLLADLAR 102


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.135    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,485,534
Number of Sequences: 224733
Number of extensions: 1285304
Number of successful extensions: 2329
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2321
Number of HSP's gapped (non-prelim): 21
length of query: 212
length of database: 73,234,838
effective HSP length: 87
effective length of query: 125
effective length of database: 53,683,067
effective search space: 6710383375
effective search space used: 6710383375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)

- SilkBase 1999-2023 -