GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000819-TA|BGIBMGA000819-PA|IPR001509|NAD-dependent
epimerase/dehydratase
         (212 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short
          gastrulation protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 65 GTDAVVITLGTRNDLAPTSDLSEGTKN 91
          G   V++TL T  + AP  D    T+N
Sbjct: 5  GLFCVLVTLATARNKAPLLDDGTRTRN 31


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)

Query: 137  LKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTP 170
            L D+G       PP   + PS E + E   E  P
Sbjct: 1764 LADAGTGQQETIPPIDEEPPSVEAVEEEREEAPP 1797


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.135    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,481
Number of Sequences: 317
Number of extensions: 1960
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 212
length of database: 114,650
effective HSP length: 54
effective length of query: 158
effective length of database: 97,532
effective search space: 15410056
effective search space used: 15410056
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)