GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000819-TA|BGIBMGA000819-PA|IPR001509|NAD-dependent
epimerase/dehydratase
         (212 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094929-1|AAM11282.1|  204|Drosophila melanogaster RH49505p pro...   184   1e-46
AE014297-1036|AAF54447.1|  204|Drosophila melanogaster CG9471-PA...   182   3e-46
BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p pro...    30   2.7  
AY069503-1|AAL39648.1|  630|Drosophila melanogaster LD22648p pro...    30   2.7  
AF312231-1|AAG33625.1|  946|Drosophila melanogaster proteosome s...    30   2.7  
AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteaso...    30   2.7  
AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-P...    30   2.7  
AY119584-1|AAM50238.1|  534|Drosophila melanogaster LD14064p pro...    29   3.6  
AE014296-1373|AAS65055.1|  534|Drosophila melanogaster CG7942-PB...    29   3.6  
AE014296-1372|AAF50486.1|  534|Drosophila melanogaster CG7942-PA...    29   3.6  

>AY094929-1|AAM11282.1|  204|Drosophila melanogaster RH49505p
           protein.
          Length = 204

 Score =  184 bits (447), Expect = 1e-46
 Identities = 89/205 (43%), Positives = 127/205 (61%), Gaps = 2/205 (0%)

Query: 1   MKKVVIFGSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVH 60
           M++V I G TG+ G  AV+ AL+KGL V+   R    +PE  K KVE+VKG+V   + V 
Sbjct: 1   MQRVAIIGGTGMTGECAVDHALQKGLSVKLLYRSEKTVPERFKSKVELVKGDVTNYEDVQ 60

Query: 61  EAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVP 120
             +EG DAV + LGTRN L  T++LS GT+N+I AM+   +   S  +S+FL     +VP
Sbjct: 61  RVIEGVDAVAVILGTRNKLEATTELSRGTENLIKAMKEAKLTKFSIVMSSFLLRPLNEVP 120

Query: 121 PIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLG 180
            +F  LNE+H+RM    K   L+WIA  PPH  D+P+      V  E+ PGR ++K DLG
Sbjct: 121 TVFHRLNEEHQRMLDLTKACDLDWIAILPPHIADEPA--TAYTVLHEEAPGRLVSKYDLG 178

Query: 181 TFLVDALSEPKYYKAVIGICNVPKN 205
            F++D+L +P++Y+ V GI   PK+
Sbjct: 179 KFIIDSLEQPEHYRKVCGIGKSPKS 203


>AE014297-1036|AAF54447.1|  204|Drosophila melanogaster CG9471-PA
           protein.
          Length = 204

 Score =  182 bits (443), Expect = 3e-46
 Identities = 87/205 (42%), Positives = 127/205 (61%), Gaps = 2/205 (0%)

Query: 1   MKKVVIFGSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVH 60
           M+++ I G TG+ G  AV+ AL+KGL V+   R    +PE  K KVE+VKG+V   + V 
Sbjct: 1   MQRIAIIGGTGMTGECAVDHALQKGLSVKLLYRSEKTVPERFKSKVELVKGDVTNYEDVQ 60

Query: 61  EAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVP 120
             +EG DAV + LGTRN L  T++LS GT+N+I AM+   +   S  +S+FL     +VP
Sbjct: 61  RVIEGVDAVAVILGTRNKLEATTELSRGTENLIKAMKEAKLTKFSIVMSSFLLRPLNEVP 120

Query: 121 PIFVNLNEDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLG 180
            +F  LNE+H+RM    K   L+WIA  PPH  D+P+      V  ++ PGR ++K DLG
Sbjct: 121 TVFHRLNEEHQRMLDLTKACDLDWIAILPPHIADEPA--TAYTVLHDEAPGRLVSKYDLG 178

Query: 181 TFLVDALSEPKYYKAVIGICNVPKN 205
            F++D+L +P++Y+ V GI   PK+
Sbjct: 179 KFIIDSLEQPEHYRKVCGIGKSPKS 203


>BT001598-1|AAN71353.1| 1020|Drosophila melanogaster RE29621p
           protein.
          Length = 1020

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 36  AKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDA 95
           A +  H +D  E +K N+ + D+V     G    ++ LG++N  A    + +      + 
Sbjct: 499 AGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQA----IEDMVSYAQET 554

Query: 96  MRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSGLNWIA 146
              K ++ ++  +S  +F   E+  P+  +L+ D       L+ SG+  IA
Sbjct: 555 QHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKD---PVLRRSGMYTIA 602


>AY069503-1|AAL39648.1|  630|Drosophila melanogaster LD22648p
           protein.
          Length = 630

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 36  AKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDA 95
           A +  H +D  E +K N+ + D+V     G    ++ LG++N  A    + +      + 
Sbjct: 109 AGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQA----IEDMVSYAQET 164

Query: 96  MRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSGLNWIA 146
              K ++ ++  +S  +F   E+  P+  +L+ D       L+ SG+  IA
Sbjct: 165 QHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKD---PVLRRSGMYTIA 212


>AF312231-1|AAG33625.1|  946|Drosophila melanogaster proteosome
           subunit RPN2 protein.
          Length = 946

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 36  AKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDA 95
           A +  H +D  E +K N+ + D+V     G    ++ LG++N  A    + +      + 
Sbjct: 425 AGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQA----IEDMVSYAQET 480

Query: 96  MRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSGLNWIA 146
              K ++ ++  +S  +F   E+  P+  +L+ D       L+ SG+  IA
Sbjct: 481 QHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKD---PVLRRSGMYTIA 528


>AF145303-1|AAF08384.1| 1020|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p110 protein.
          Length = 1020

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 36  AKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDA 95
           A +  H +D  E +K N+ + D+V     G    ++ LG++N  A    + +      + 
Sbjct: 499 AGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQA----IEDMVSYAQET 554

Query: 96  MRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSGLNWIA 146
              K ++ ++  +S  +F   E+  P+  +L+ D       L+ SG+  IA
Sbjct: 555 QHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKD---PVLRRSGMYTIA 602


>AE014297-4344|AAF56868.1| 1020|Drosophila melanogaster CG11888-PA
           protein.
          Length = 1020

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 7/111 (6%)

Query: 36  AKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDA 95
           A +  H +D  E +K N+ + D+V     G    ++ LG++N  A    + +      + 
Sbjct: 499 AGMGTHRQDLYEQLKFNLYQDDAVTGEAAGIAMGMVMLGSKNAQA----IEDMVSYAQET 554

Query: 96  MRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSGLNWIA 146
              K ++ ++  +S  +F   E+  P+  +L+ D       L+ SG+  IA
Sbjct: 555 QHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKD---PVLRRSGMYTIA 602


>AY119584-1|AAM50238.1|  534|Drosophila melanogaster LD14064p
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 55  EPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFY 114
           E + +++ +EG + V    GT+ DL       + T+N+ D       K      S + +Y
Sbjct: 12  ELERIYDTIEGIEKVG---GTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYY 68

Query: 115 EQEKVPP---IFVNLNEDHKRMFQALKDSGLNWIA 146
             E V P   IF+  N +     Q L   G  W+A
Sbjct: 69  SGELVAPVLTIFIGGNHEASNYLQELPYGG--WVA 101


>AE014296-1373|AAS65055.1|  534|Drosophila melanogaster CG7942-PB,
           isoform B protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 55  EPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFY 114
           E + +++ +EG + V    GT+ DL       + T+N+ D       K      S + +Y
Sbjct: 12  ELERIYDTIEGIEKVG---GTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYY 68

Query: 115 EQEKVPP---IFVNLNEDHKRMFQALKDSGLNWIA 146
             E V P   IF+  N +     Q L   G  W+A
Sbjct: 69  SGELVAPVLTIFIGGNHEASNYLQELPYGG--WVA 101


>AE014296-1372|AAF50486.1|  534|Drosophila melanogaster CG7942-PA,
           isoform A protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 55  EPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFY 114
           E + +++ +EG + V    GT+ DL       + T+N+ D       K      S + +Y
Sbjct: 12  ELERIYDTIEGIEKVG---GTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYY 68

Query: 115 EQEKVPP---IFVNLNEDHKRMFQALKDSGLNWIA 146
             E V P   IF+  N +     Q L   G  W+A
Sbjct: 69  SGELVAPVLTIFIGGNHEASNYLQELPYGG--WVA 101


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.135    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,533,957
Number of Sequences: 52641
Number of extensions: 424050
Number of successful extensions: 942
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 938
Number of HSP's gapped (non-prelim): 10
length of query: 212
length of database: 24,830,863
effective HSP length: 82
effective length of query: 130
effective length of database: 20,514,301
effective search space: 2666859130
effective search space used: 2666859130
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)