Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000818-TA|BGIBMGA000818-PA|IPR000182|GCN5-related
N-acetyltransferase
(201 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15770.1 68418.m01844 GCN5-related N-acetyltransferase (GNAT)... 33 0.17
At1g72030.1 68414.m08326 GCN5-related N-acetyltransferase (GNAT)... 30 1.2
At5g41370.1 68418.m05027 DNA repair protein, putative / TFIIH ba... 29 2.2
At5g41360.1 68418.m05026 DNA repair protein and transcription fa... 29 2.2
At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT... 29 2.2
At1g29720.1 68414.m03633 protein kinase family protein contains ... 27 6.6
At5g55460.1 68418.m06908 protease inhibitor/seed storage/lipid t... 27 8.7
At5g26240.1 68418.m03129 chloride channel protein (CLC-d) identi... 27 8.7
At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR... 27 8.7
At1g18335.1 68414.m02291 GCN5-related N-acetyltransferase (GNAT)... 27 8.7
>At5g15770.1 68418.m01844 GCN5-related N-acetyltransferase (GNAT)
family protein similar to SP|O93806
Glucosamine-phosphate N-acetyltransferase (EC 2.3.1.4)
(Phosphoglucosamine transacetylase) (Phosphoglucosamine
acetylase) {Candida albicans}; contains Pfam profile
PF00583: acetyltransferase, GNAT family
Length = 149
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 78 VETVVISRAMRGKKLGTFLMKRVEEYCKSVLNLKMIHLSTKGQENFYVKLG 128
+E VV+ RGK+LG +++ + ++CKS+ K+I + + FY K G
Sbjct: 86 IEDVVVDSRFRGKQLGKKVVEFLMDHCKSMGCYKVILDCSVENKVFYEKCG 136
>At1g72030.1 68414.m08326 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 256
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 49 TSLILVANTKSLLGHCKLTAIPSIPESCFVETVVISRAMRGKKLGTFLMKRVEEYCKSVL 108
+S++ V + + L P + E +V + +S++ R KK+ + L+K + C +
Sbjct: 146 SSVVGVVDVTAQTESSVLRYFPGVEEYLYVSGLAVSKSQRRKKMASTLLKACDVLC-YLW 204
Query: 109 NLKMIHL----STKGQENFYVKLGYKV 131
K++ L N Y GY V
Sbjct: 205 GFKLLALRAYEDDAAARNLYSNAGYSV 231
>At5g41370.1 68418.m05027 DNA repair protein, putative / TFIIH basal
transcription factor complex helicase XPB subunit,
putative (XPB1) contains Pfam profile PF00271:Helicase
conserved C-terminal domain; identical to cDNA putative
DNA repair protein (XPB1) GI:10314019
Length = 767
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 122 NFYVKLGYKVCAPISIYGVRLPSHSYSSAVSIKLDNPVAINPITQ 166
+F + + VC P S++ L HS +AVS+ L+ I+ + +
Sbjct: 88 DFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNK 132
>At5g41360.1 68418.m05026 DNA repair protein and transcription
factor, putative (XPB2) similar to SP|P49135 TFIIH basal
transcription factor complex helicase XPB subunit (EC
3.6.1.-) (Basic transcription factor 2 89 kDa subunit)
{Mus musculus}; contains Pfam profile PF00271: Helicase
conserved C-terminal domain; contains TIGRfam profile
TIGR00603: DNA repair helicase rad25
Length = 766
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 122 NFYVKLGYKVCAPISIYGVRLPSHSYSSAVSIKLDNPVAINPITQ 166
+F + + VC P S++ L HS +AVS+ L+ I+ + +
Sbjct: 88 DFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNK 132
>At5g06710.1 68418.m00758 homeobox-leucine zipper protein 14 (HAT14)
/ HD-ZIP protein 14 contains similarity to homeodomain
leucine zipper protein
Length = 336
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 16 EYLKACCEMINEEWPRSETARMMSLQASCNELPTSLILVANTKSLLGHCKLTA 68
EYLK CCE + EE R + + L+ P + L A T ++ C+ A
Sbjct: 252 EYLKRCCESLTEENRRLQ-KEVKELRTLKTSTPFYMQLPATTLTMCPSCERVA 303
>At1g29720.1 68414.m03633 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 300
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 9 LPLHKHPEYLKACCEMINEEWPRSETARMMSLQASCNELPTSL--ILVANTKSLLGHCKL 66
L L + + L+ M+ E+ RSE RM+ + C SL + K L G ++
Sbjct: 170 LTLQQTGDILEIVDRMLEGEFNRSEAVRMIKVALVCTNSSPSLRPTMSEAVKMLEGEIEI 229
Query: 67 TAIPSIP 73
T + S P
Sbjct: 230 TQVMSDP 236
>At5g55460.1 68418.m06908 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
profile: PF00234 protease inhibitor/seed storage/LTP
family
Length = 109
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 15 PEYLKACCEMINEEWPRSETARMMSLQASCNELPTSLILVANTKSLLGHCKLTAIP 70
P +K CCE++ + A + + + LP + + ++LL C LT IP
Sbjct: 53 PSPIKECCELL-------QAANLKCICRFKSVLPVLAVYPSKVQALLSKCGLTTIP 101
>At5g26240.1 68418.m03129 chloride channel protein (CLC-d) identical
to CLC-d chloride channel protein [Arabidopsis thaliana]
GI:1742959
Length = 792
Score = 27.1 bits (57), Expect = 8.7
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 27 EEWPRSETARMMSLQASCNELPTSL---ILVANTKSLLGHCKLTAIPSIPESCFVETVVI 83
E P+ +M++ +A ++ SL I VA+ S+LG K P I + ET+VI
Sbjct: 575 ESRPKYHMRQMIAKEACQSQKVISLPRVIRVADVASILGSNKHNGFPVIDHTRSGETLVI 634
Query: 84 SRAMRGKKLGTFLMKRVE 101
+R L L +V+
Sbjct: 635 GLVLRSHLL-VLLQSKVD 651
>At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR1)
identical to microtubule organization 1 protein
GI:14317953 from [Arabidopsis thaliana]
Length = 1978
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1 MEPENLKVLPLHKHPEYLKACCEMINEEWPRSETARMMSLQA 42
+E N K L L H EY+ C E +N+ P A +L A
Sbjct: 432 LETSN-KALILKAHKEYVPLCMECLNDGTPDVRDAAFSALAA 472
>At1g18335.1 68414.m02291 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 269
Score = 27.1 bits (57), Expect = 8.7
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 77 FVETVVISRAMRGKKLGTFLMKRVEEYCK----SVLNLKMIHLSTKGQENFYVKLGYKVC 132
+V + + ++GK LG FLM+ +E S + L ++ + + KLGY++
Sbjct: 170 YVYEIQLESRVQGKGLGEFLMQLIELIASKNRMSAIVLTVLTSNALAMTFYMSKLGYRI- 228
Query: 133 APISIYGVRLPSHSYSSAVSIK 154
+ IS LP+ S + K
Sbjct: 229 SSISPSKANLPTLSVKYEILCK 250
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.133 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,372,810
Number of Sequences: 28952
Number of extensions: 159441
Number of successful extensions: 323
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 319
Number of HSP's gapped (non-prelim): 10
length of query: 201
length of database: 12,070,560
effective HSP length: 78
effective length of query: 123
effective length of database: 9,812,304
effective search space: 1206913392
effective search space used: 1206913392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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