GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000818-TA|BGIBMGA000818-PA|IPR000182|GCN5-related
N-acetyltransferase
         (201 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   9.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.0  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 10/28 (35%), Positives = 12/28 (42%)

Query: 139 GVRLPSHSYSSAVSIKLDNPVAINPITQ 166
           G   P  S    V+  L NP  +NP  Q
Sbjct: 40  GYHSPLESNHKLVTFILKNPPNLNPAVQ 67


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 63  HCKLTAIPSIPESCFVETVVISR 85
           +C+ T + +IP    VE V+I +
Sbjct: 502 YCECTHVVNIPLGTVVEMVLIDK 524


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 40  LQASCNELPTSLILVANTKSLL 61
           L A CNE+    I V+  K+ L
Sbjct: 456 LDARCNEIRPDAICVSQLKNAL 477


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.133    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,346
Number of Sequences: 317
Number of extensions: 1439
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 201
length of database: 114,650
effective HSP length: 54
effective length of query: 147
effective length of database: 97,532
effective search space: 14337204
effective search space used: 14337204
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 41 (20.6 bits)