GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000818-TA|BGIBMGA000818-PA|IPR000182|GCN5-related
N-acetyltransferase
         (201 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...   136   3e-34
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    23   6.3  

>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score =  136 bits (330), Expect = 3e-34
 Identities = 61/144 (42%), Positives = 95/144 (65%), Gaps = 3/144 (2%)

Query: 8   VLPLHKHPEYLKACCEMINEEWPRSETARMMSLQASCNELPTSLIL---VANTKSLLGHC 64
           V+P+H+HPE  + C  +IN EWPRS  AR  S + S + LP +L+L   +  T ++LGH 
Sbjct: 241 VVPIHRHPELKEQCVRLINTEWPRSRMARFWSFETSTDMLPITLVLTQLIDETVTVLGHA 300

Query: 65  KLTAIPSIPESCFVETVVISRAMRGKKLGTFLMKRVEEYCKSVLNLKMIHLSTKGQENFY 124
           K++ +P+   S +VE+VV+    RG+ +GT LM+ VE+YCK ++N+  ++++T GQE FY
Sbjct: 301 KVSPVPADDTSAYVESVVVDYRYRGRGIGTHLMEEVEKYCKVMMNINHMYIATDGQEVFY 360

Query: 125 VKLGYKVCAPISIYGVRLPSHSYS 148
            KLGY  C  I+I+G R   ++ S
Sbjct: 361 AKLGYIFCKAINIFGTRSTRNTVS 384



 Score = 49.2 bits (112), Expect = 8e-08
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 8   VLPLHKHPEYLKACCEMINEEWPRSETARMMSLQASCNELPTSLILVANTK---SLLGHC 64
           VLP++   ++ + C   IN++W R  T R+ +L+ S  E+P SLI+ +       ++  C
Sbjct: 44  VLPINNKDKWYRTCNRQINQQWKRIRTERLKTLEHS-PEMPPSLIIASGENDRVQVIALC 102

Query: 65  KLTAIPSIPESCFVETV 81
            ++ IPS    C +E +
Sbjct: 103 SISKIPSCARRCLLEVI 119


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 27  EEWPRSETARMMSLQASCNELPTSLILVANTKSLLGHCKLTAI 69
           E  P ++ AR+ + +   ++LP +L+  +   +LL   K+ AI
Sbjct: 194 ETRPYNQGARLTAYELVHDKLPATLVTDSMVAALLNSRKIDAI 236


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.133    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,343
Number of Sequences: 2123
Number of extensions: 5995
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 3
length of query: 201
length of database: 516,269
effective HSP length: 61
effective length of query: 140
effective length of database: 386,766
effective search space: 54147240
effective search space used: 54147240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)