GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000818-TA|BGIBMGA000818-PA|IPR000182|GCN5-related
N-acetyltransferase
         (201 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              24   0.86 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.6  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   8.1  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 154 KLDNPVAINPITQTVPGAFXXXXXXXXKILKNTDNTIKSNKTYMF 198
           K +  +  N + + +P AF            N D++ K  K++MF
Sbjct: 84  KKNGKIRYNLLKKVIPEAFKEIGVEMIDSCSNVDSSDKCEKSFMF 128


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 147 YSSAVSIKLDNPVAINPITQTVPG 170
           Y+S+V+  L     +NP+   +PG
Sbjct: 531 YTSSVNSNLTVNQTVNPVAINIPG 554


>AF023666-1|AAC14552.1|  363|Apis mellifera
          sn-glycerol-3-phosphate dehydrogenase protein.
          Length = 363

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 4  ENLKVLPLHKHPEYLKACCEMI 25
          EN+K LP HK P  + A  +++
Sbjct: 60 ENVKYLPGHKLPPNIIAIPDVV 81


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.133    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,345
Number of Sequences: 429
Number of extensions: 1724
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 201
length of database: 140,377
effective HSP length: 55
effective length of query: 146
effective length of database: 116,782
effective search space: 17050172
effective search space used: 17050172
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)