Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000817-TA|BGIBMGA000817-PA|IPR001683|Phox-like
(643 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1555 + 34376612-34376887,34377306-34377450,34377891-343780... 39 0.011
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 37 0.043
01_06_1751 + 39656276-39656279,39656411-39656515,39656680-396568... 34 0.30
10_08_0614 - 19238064-19238132,19238381-19238407,19238436-192385... 33 0.70
02_01_0321 - 2162015-2162134,2162763-2162846,2162931-2163011,216... 33 0.70
05_04_0176 + 18749945-18749969,18750186-18750751,18750876-187509... 31 2.8
01_06_0295 + 28276505-28276576,28276682-28276888,28277492-282777... 31 3.7
12_01_0079 + 644754-645932,645966-646061,646193-647122 30 4.9
11_06_0011 + 19245742-19246440,19248361-19249170 30 4.9
11_01_0078 + 609005-610183,610217-610312,610444-611373 30 4.9
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368... 30 4.9
01_05_0619 - 23737178-23737378,23737460-23737516,23737597-237377... 30 4.9
05_05_0022 + 21592403-21593083,21593720-21594208 30 6.5
10_08_0485 + 18235597-18236256,18236353-18236400,18236522-182366... 29 8.6
>04_04_1555 +
34376612-34376887,34377306-34377450,34377891-34378000,
34378121-34378418,34378591-34379006
Length = 414
Score = 39.1 bits (87), Expect = 0.011
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 356 QNRRSMMVTPIQETPSLTLSESDMQVATDDPGAENGNGVLTDPLLNRLKE-QELEASDNV 414
Q+ MV+P +ETP +S SD + GA N P++ L +EL A +V
Sbjct: 302 QHDEHEMVSPGKETP---ISHSDGSIG--HAGANLANSGAGSPIVKDLPTVEELPAESSV 356
Query: 415 ST---SNDELPAEQPDAWDDPLRRALEPDAPARNGAVAPTLVHLPLE 458
+T S +ELPAE P A + P L ++P + P + LP E
Sbjct: 357 ATNLPSAEELPAESPIANNLPAVEELAAESPVASS--TPAIEELPAE 401
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 37.1 bits (82), Expect = 0.043
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 251 PRIVEGQS-SSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIASQ 309
P EG SSS+ EER Q R+ + + + RR+ E EA+R M+R +
Sbjct: 72 PSEAEGSPFSSSVGSGAEERRQSVAAERRRSQEEEWERRRSQEEEAVREMRRSQEEDEVE 131
Query: 310 KMLVISSLENDCSKEELNRQIAVLQELQKKYVRLEMALQYSFFDSPQ 356
+ ++ S E + K ++ L+E Q L++ L+ S D+P+
Sbjct: 132 ERVIRESSEAEERKRVREKEDDDLEEFQ-----LQLVLEMSARDNPE 173
>01_06_1751 +
39656276-39656279,39656411-39656515,39656680-39656801,
39657826-39658869
Length = 424
Score = 34.3 bits (75), Expect = 0.30
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 250 KPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIASQ 309
KP+ GQ ++ D PE + KY G S R + + A++R+ + +
Sbjct: 321 KPKTAVGQDTNIEDPKPETATPKCKYSEDSWGQSLLCRNSIEHLDRWAALRRIKKKKSGG 380
Query: 310 KMLVISSLENDCSKEELNRQIAVLQELQKKYVRLEMAL 347
K+ + EE+ R ++Q K + L+ AL
Sbjct: 381 KIRTVK-----VQFEEMGRCYIIIQAFSKFFGELQKAL 413
>10_08_0614 -
19238064-19238132,19238381-19238407,19238436-19238510,
19238637-19239317,19239423-19239554,19239676-19239723,
19239828-19239878,19240015-19240134,19241121-19241261,
19241701-19241865,19241981-19242160,19242314-19242445,
19242536-19242643,19242779-19242883,19243217-19243321,
19243407-19243463,19243991-19244010,19244299-19244377,
19245021-19245080,19245562-19245615,19246535-19246600,
19246938-19246990,19247361-19247450,19248152-19248249,
19248348-19248721
Length = 1029
Score = 33.1 bits (72), Expect = 0.70
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 267 EERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIA--SQKM--LVISSLENDCS 322
+ RH RA ++ + +SG V A + Q + A S+K L + S +N
Sbjct: 640 KRRHMRALEQKLM----ESGEASVANASMMDMQQTITKLTAQCSEKAFELELRSADNRVL 695
Query: 323 KEELNRQIAVLQELQKKYVRLEMALQYSFFDSPQNRRSMMVTPIQETPSLTLSESD 378
+E+L ++ + ELQ+K +RLE L + SP+ + ++ L +ES+
Sbjct: 696 QEQLQQKNVEINELQEKVLRLEQQLTTNTEASPEQCTEHELHDLKSKLQLKEAESE 751
>02_01_0321 -
2162015-2162134,2162763-2162846,2162931-2163011,
2163690-2163867,2163946-2164089,2164194-2164240,
2164520-2164576,2165286-2165408,2165496-2165618,
2165959-2166072,2166169-2166176,2166272-2166458,
2174597-2174763,2174924-2175008,2176632-2176820,
2177727-2177918,2178434-2178634
Length = 699
Score = 33.1 bits (72), Expect = 0.70
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 236 PDDSDDMSSTE-DYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAE 294
P+D D+ ++ R+ +S+ + R + +HQR +YR + + +VTE
Sbjct: 36 PEDRADVERVRREFTDHRLHHRESADLLMRMQQNKHQRRRYRIPPVNNKLGEKEEVTEEI 95
Query: 295 ALRAMQRLCSRIAS 308
A+ +++R +S
Sbjct: 96 AMASLRRALDEFSS 109
>05_04_0176 +
18749945-18749969,18750186-18750751,18750876-18750944,
18752128-18752325,18752791-18752922,18753658-18753744,
18753845-18754288,18754644-18754811,18755129-18755359,
18755893-18756008,18756125-18756407
Length = 772
Score = 31.1 bits (67), Expect = 2.8
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 10 NKRIELEDYAKNIIRELVESGK----IESSTPSPDSPASETSTESLMHLLRQCEPDTATS 65
+K +LE Y + + E+GK ++ TP + TS + L+ L + D TS
Sbjct: 419 SKFYDLEHYLLSFLDGSTENGKERVRLKLETPIGIADRLLTSCQRLVKLEYEKAIDDLTS 478
Query: 66 IKDTVDRHKRELVELEEELQSRVRSVSN 93
IKD V V++E + S R +S+
Sbjct: 479 IKDLVSGANNYAVKIEADSDSWQRQISS 506
>01_06_0295 +
28276505-28276576,28276682-28276888,28277492-28277740,
28277928-28278080,28278158-28278313,28278411-28278570,
28278664-28278815,28278906-28278993,28279111-28279223,
28279271-28279345,28279435-28279669,28279760-28280148
Length = 682
Score = 30.7 bits (66), Expect = 3.7
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 256 GQSSSSMDRSPEERHQRAK--YRRKITGDSKSG---RRQVTEAEALRAMQRLCSRIASQK 310
G+ ++ DR E Q YRRK+ ++S R+ + E EA + +CS +
Sbjct: 31 GEPDTTRDRMLLELEQECLEVYRRKVDQANRSRAQLRKAIAEGEA--ELAGICSAMGEPP 88
Query: 311 MLVISSLEN-DCSKEELNRQIAVLQELQKKYV 341
+ V S + +EELN + L+E++KK V
Sbjct: 89 VHVRQSNQKLHGLREELNAIVPYLEEMKKKKV 120
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 30.3 bits (65), Expect = 4.9
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 424 EQPDAWDDPLRRALEPDAPARNGAVAPTLVHLPLELD 460
E+P+ ++DP +PDA A G V+ +L + PL+LD
Sbjct: 535 EEPEQFEDP---CYDPDAIALLGPVSESLDNFPLDLD 568
>11_06_0011 + 19245742-19246440,19248361-19249170
Length = 502
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 435 RALEPDAPARNGAVAPTLVHLPLELDKACCVDAVVSVPGWVTRGAGARTHHEYEVR 490
R L P A R A+ L H PL+ + + P W GAGAR HH +R
Sbjct: 244 RFLSPSA--RTPALGTPLGHHPLDALRRSMLHGEYQSPRW-GHGAGARAHHRDIIR 296
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 30.3 bits (65), Expect = 4.9
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Query: 424 EQPDAWDDPLRRALEPDAPARNGAVAPTLVHLPLELD 460
E+P+ ++DP +PDA A G V+ +L + PL+LD
Sbjct: 535 EEPEQFEDP---CYDPDAIALLGPVSESLDNFPLDLD 568
>05_07_0310 +
29135875-29136052,29136206-29136617,29136723-29136867,
29137944-29138102,29138183-29138242,29138349-29138546
Length = 383
Score = 30.3 bits (65), Expect = 4.9
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 236 PDDSDDMSSTEDYHKPRIVEGQSS-SSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAE 294
P+D +D P E + + + EE + + +RK K+ R+V +
Sbjct: 218 PEDVPQSEVDKDKESPENEEEEKEPEDKEMTLEEYEKVLEEKRKALLALKAEERKVEVDK 277
Query: 295 ALRAMQRLCSRIASQKMLVISSLENDCSKEE 325
L+AMQ+L + A++++ + + D K+E
Sbjct: 278 ELQAMQQLSVKKANEEVFIKLGSDKDLKKKE 308
>01_05_0619 -
23737178-23737378,23737460-23737516,23737597-23737755,
23739477-23739621,23739725-23740136,23740693-23740855
Length = 378
Score = 30.3 bits (65), Expect = 4.9
Identities = 19/96 (19%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 240 DDMSSTEDYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSG-------RRQVTE 292
+D+ +++ K + EG+S+ ++ PE++ + K+ + + R+V
Sbjct: 213 EDVPQSDEVEKHK--EGESNEEEEKEPEDKEMTLEEYEKVLEEKRKALLSLKVEERKVVV 270
Query: 293 AEALRAMQRLCSRIASQKMLVISSLENDCSKEELNR 328
+ L++MQ+L + S ++ + + D KE + R
Sbjct: 271 DKELQSMQQLSVKKDSDEVFIKLGSDKDKKKENVER 306
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 29.9 bits (64), Expect = 6.5
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 365 PIQETPSLTLSESDMQVATDDPGAENGNGVLTDPLLNRLKEQELEASDNVSTSNDELPAE 424
P + S T + S + GA +L PLL RL E+ ++A D + +N + E
Sbjct: 36 PSPSSSSTTTTSSSLTAQRQPRGAGT---MLCLPLLGRLGEEPVDADDGGAMNNPPVKEE 92
Query: 425 QPDAWDDPLRRALEPDAPARNG 446
+ DD L PA G
Sbjct: 93 VSNTTDDYAGVDLNIGLPATTG 114
>10_08_0485 +
18235597-18236256,18236353-18236400,18236522-18236644,
18237062-18237211,18237702-18237873,18237965-18238025,
18238129-18238237
Length = 440
Score = 29.5 bits (63), Expect = 8.6
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 377 SDMQVATDDPGAENGNGVLTDPLLNRLKEQELEASDNVSTSNDELPAEQPDAW 429
+D++ D PGA G GV +PLL R+ E+E D VS S L + W
Sbjct: 99 TDVECFVDGPGA--GAGVGAEPLLARVSEEE---EDGVSASAAALVGREWWEW 146
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.128 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,925,203
Number of Sequences: 37544
Number of extensions: 565479
Number of successful extensions: 1661
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1658
Number of HSP's gapped (non-prelim): 14
length of query: 643
length of database: 14,793,348
effective HSP length: 87
effective length of query: 556
effective length of database: 11,527,020
effective search space: 6409023120
effective search space used: 6409023120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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