Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000817-TA|BGIBMGA000817-PA|IPR001683|Phox-like
(643 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013) 38 0.019
SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058) 37 0.057
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 35 0.23
SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.31
SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.54
SB_47745| Best HMM Match : SURF6 (HMM E-Value=1.1) 33 0.93
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 33 0.93
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 33 0.93
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.93
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_34228| Best HMM Match : RasGAP (HMM E-Value=0.0092) 31 2.9
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.9
SB_21430| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.9
SB_45038| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.8
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 31 3.8
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 31 3.8
SB_13907| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.8
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 30 5.0
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06) 30 5.0
SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.6
SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.6
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 30 6.6
SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 8.7
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 8.7
>SB_32968| Best HMM Match : SRP40_C (HMM E-Value=0.013)
Length = 440
Score = 38.3 bits (85), Expect = 0.019
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 13/202 (6%)
Query: 237 DDSDDMSSTEDYHKPRIVEG-QSSSSMDRSPEERHQRAKYRRKITG-------DSKSGRR 288
DD D+ + +K + + Q SSS D S +E ++ K + G +S S
Sbjct: 156 DDKDEKPKKKADNKGKKTQAKQESSSEDDSSDEEDEKPKKKADNKGKKTQAKQESSSEED 215
Query: 289 QVTEAEALRAMQRLCSRIASQKMLVISSLENDCSKEELNRQIAVLQELQKKYVRLEMALQ 348
++ E + ++ ++ SS E+D S EE + KK + +
Sbjct: 216 DSSDEEEEKPKKKADDKVKKTPAKQESSSEDDSSNEEEEKPKKKADVKGKKTPAKQESSS 275
Query: 349 ---YSFFDSPQNRRSMMVTPIQETPSLTLSESDMQVATDDPGAENGNGVLTDPLLNRLKE 405
S D + + V+ ++TP+ S SD ++DD E+ L N K
Sbjct: 276 GDDSSDDDEEEKSKKKAVSKEKKTPAKQESSSD-DSSSDDSSDEDTKMPTKSKLKNGTKT 334
Query: 406 Q-ELEASDNVSTSNDELPAEQP 426
+ + E+S + S+S DE PA++P
Sbjct: 335 KAKEESSSSDSSSEDEPPAKRP 356
>SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058)
Length = 1299
Score = 36.7 bits (81), Expect = 0.057
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 365 PIQETPSLTLSESDMQVATDDPGAENGNGVLTDPLLNRLKEQELEASDNVSTSNDELP-- 422
P +TLS SD+ +DD + + V T + L ASD +TS+D++
Sbjct: 541 PTTSDDQVTLSASDVPTTSDDQITPSASDVPT----TSDDKVTLSASDVPTTSDDQVTLS 596
Query: 423 -AEQPDAWDDPLRRALEPDAPARNGAVAPTLVHLPLELDKACCVDAVVSVP 472
++ P DDP+ + P + V P+ + +P D + A ++VP
Sbjct: 597 ASDVPTTSDDPVTPSASDVTPTSDDQVTPSAIDIPTAKDDKVTLSA-MNVP 646
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 34.7 bits (76), Expect = 0.23
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 324 EELNRQIAVLQELQKKYVRLEMALQYSFFDSPQNRRSMMVTPIQETPSLTLSESDMQVAT 383
EEL Q + E Q+KY R M + +V + + +LS SDM ++
Sbjct: 1058 EELREQTKIASECQEKYERELMLHAKDVQALSDAKEERLVNQMASSKKTSLSTSDMPASS 1117
Query: 384 DDPGAENGNGVLTDPLLNRLKEQELEASD 412
D +E G+ + R +ELE ++
Sbjct: 1118 ADDSSEASKGIEDLWEIVRFSRRELEIAE 1146
>SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 34.3 bits (75), Expect = 0.31
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 234 PVPDDSDDMSSTEDYHKP-RIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTE 292
P + + +T+ Y K R GQS S D + E + + R+ + D+K+ RR+++
Sbjct: 631 PQAKEQMERIATQTYEKQQRERMGQSKSKEDDADETFLRESDPRKWLAADTKTLRRRLSS 690
Query: 293 AEALRAMQRLCSRIASQKML 312
E++ +++ +R+ ++ L
Sbjct: 691 IESINTLKKFAARVRREREL 710
>SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 33.5 bits (73), Expect = 0.54
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 13 IELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPDTATSIKDTVDR 72
+E+ + ++ L E+ +++ + + +S +H RQ EP I DT+ R
Sbjct: 380 LEMTNQRGQLVNSLREADTVDTRDTVSLNANLDAVLDSDLHKERQAEPTPRNGIADTLYR 439
Query: 73 HKRELVELEEELQSRVRSV 91
K+EL+ + + VR +
Sbjct: 440 EKQELLNILRTREDTVRCI 458
>SB_47745| Best HMM Match : SURF6 (HMM E-Value=1.1)
Length = 223
Score = 32.7 bits (71), Expect = 0.93
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 5 RSRIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLL------RQC 58
R+++E + +++ KN I+ +SG+ + ++ SET +S + +
Sbjct: 84 RNKLETQETKIKAL-KNTIKLAEKSGRAVYKEDASEANDSETEKDSTFGRIFDSIFQEKS 142
Query: 59 EPDTATSIKDTVDRHKRELVELEEELQSRVRSVSN 93
+ + + + D +DRH L E EE+LQ+ + V N
Sbjct: 143 KVEDSPTTTDILDRHSDRLQEQEEKLQAVLEKVGN 177
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 32.7 bits (71), Expect = 0.93
Identities = 23/107 (21%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 322 SKEELNRQIAVLQELQKKYVRLEMALQYSFFDSPQNRRSMMVTPIQETPSLTLSESDMQV 381
+++ELNR +QE +K+ LE A F + + +R + + +TP + ES++Q
Sbjct: 608 TEDELNRLKNDIQEKEKRISELESA----FDAADKEKRDLEQQVLSQTPKIKRLESELQD 663
Query: 382 ATDDPGAENGNGVLTDPLLNRLKEQELEASDNVSTSNDELPAEQPDA 428
A + A + + +++ L+++ + +S + + A Q ++
Sbjct: 664 ALNRASALEEDAKNHNQVVDNLQDEITRLKNKLSEAERQAAATQRES 710
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 32.7 bits (71), Expect = 0.93
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 257 QSSSSMDRSPEERHQRAKYRRKITGDSKSGRR-------------QVTEAEALRAMQRLC 303
QSSS + +R +R K RK T KSG++ + E+E + +R
Sbjct: 796 QSSSRSTQPETKRGRRNKDARKETRSDKSGKKGGDAGDDPSDPDEEKDESEEDQERKRHN 855
Query: 304 SRIASQKMLVIS-SLENDCSKEEL---NRQIAVLQELQKKYVRLEMALQYSFFDSPQNRR 359
+ A ++L++S + N+ + L NR I L+E K+ R +Q D N +
Sbjct: 856 KKAALNRLLLVSEKILNEELRHALDAKNRDIKDLKETVVKFKRRISQIQVD-IDILMNEK 914
Query: 360 SMMVTPIQETPSLTLSES 377
+ + I++ SL+LSES
Sbjct: 915 TELAKQIEKQVSLSLSES 932
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 32.7 bits (71), Expect = 0.93
Identities = 24/120 (20%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 236 PDDSDDMSSTE-DYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAE 294
P D D++ + D K ++ + ++ + +E +++ K + K + K+ ++++++ E
Sbjct: 1592 PFDFDELDGAKRDRDKYQLEKEEAEKRLQSYEDELNEKQKQKEKAEDNLKALKKRISDLE 1651
Query: 295 A----LRAMQ--RLCSRIASQKMLVISSLENDCSKEELNRQIAVLQELQKKYVRLEMALQ 348
L + + R + + V +N+ KEE + + L++LQ + RLE L+
Sbjct: 1652 VDNKNLETARDNAVYERDIANQKFVEQRTDNEVLKEEKEKLLMQLKDLQNEVARLENQLE 1711
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 31.5 bits (68), Expect = 2.2
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
Query: 238 DSDDMSSTEDYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTE-AEAL 296
+ D++ S D + +E + S + +ER+ A+ R ++ + GR ++ E L
Sbjct: 1045 EMDNLLSKIDTEQKGRMEAEVKSLTEMIEKERNGHAQKRGQLEREIDKGRAEIKELGSLL 1104
Query: 297 RAMQRLCSRIASQKMLVISSLEN-DCSKEELNRQIAVLQELQKKYVRLEMALQYSFFDSP 355
Q + +S ++ D EL +++A+L+ KK V+ E+A Q
Sbjct: 1105 ETEQSSHEKTIKDTQKHLSRMDRADKENSELKQELALLKTKLKK-VKEELARQREQNTDL 1163
Query: 356 QNRRSMMVTPIQETPSLTLSESDMQV 381
+R M+ E L S ++ ++
Sbjct: 1164 LSRSQKMMVDELEVQKLNNSLTEAEI 1189
>SB_34228| Best HMM Match : RasGAP (HMM E-Value=0.0092)
Length = 633
Score = 31.1 bits (67), Expect = 2.9
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 21 NIIRELVESGKIESSTPSPDSPASETSTE-SLMHLLRQCEPDTATSIKDTVDRHKRELVE 79
N EL ++ DS +S E S H+L + EP+T + I ++V V
Sbjct: 478 NKFTELFSKMSLDKELDKVDSESSSNEIETSGEHMLGESEPETLSQISESVSELLLACVR 537
Query: 80 LEEELQSRVRSVSNQR 95
+ L R+R +R
Sbjct: 538 TSDNLLERLRERGTKR 553
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 31.1 bits (67), Expect = 2.9
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 246 EDYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKI-----TGDSKSGRRQVTEA 293
+D++ P I QSS+ D SP RA I TGD KS +Q EA
Sbjct: 444 DDFNNPLIFMFQSSAKSDDSPSINDLRADIESAIKDALKTGDKKSAPKQTAEA 496
>SB_21430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 31.1 bits (67), Expect = 2.9
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 236 PDDSDDMSSTEDYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAEA 295
PDD DD +++ + P + + +++ S R + KY K ++ + +R EA+
Sbjct: 16 PDDDDDDDDSDEEYVPVPTKKRRTNTKAVSAYGRDKDQKYIEKRMKNNLAAKRS-REAKR 74
Query: 296 LRAMQRLCSRIASQKMLVISSLENDCSKEELNRQIAVLQELQKK 339
R ++ A QK L + +D +KE L +++ ++ K
Sbjct: 75 QREIE------AMQKTLTLEKENSDLNKEALAEELSEAEQSSAK 112
>SB_45038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 30.7 bits (66), Expect = 3.8
Identities = 40/193 (20%), Positives = 82/193 (42%), Gaps = 16/193 (8%)
Query: 240 DDMSSTEDYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAEALRAM 299
D S + + ++G S S +RS E ++ + + + + R QV EA + RA
Sbjct: 15 DGTSCERVARRTQAIDGGSGKSRERSEGEIEEKDEEIKSLRDVIEQLREQVAEANS-RAA 73
Query: 300 QRLCSRIAS-------QKMLVISSLENDCSKEELNRQ--IAVLQELQKKYVRLEMALQYS 350
+ SR A+ Q++ ++S E E LN Q + L+++Y L+ L+
Sbjct: 74 DEVASRDATLDERLEEQRVQILSEFE----AERLNHQRVLRDYSRLEQRYQNLQDELEIV 129
Query: 351 FFDSPQNRRSM--MVTPIQETPSLTLSESDMQVATDDPGAENGNGVLTDPLLNRLKEQEL 408
+ RS+ + T ET + E +++ + E + + L RL+ + +
Sbjct: 130 QTSPQKPLRSLDSVSTASSETSLVDALEKELREQEAEEPDEVRSIITKSQLFVRLRSKVM 189
Query: 409 EASDNVSTSNDEL 421
+ + + + +L
Sbjct: 190 DLENRLVDAQSQL 202
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 30.7 bits (66), Expect = 3.8
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 353 DSPQNRRSMMVTPIQETPSLTLSESDMQVATDDPGAENGNGVLTDPLLNRLKEQ-ELEAS 411
D + + V+ ++TP+ S SD ++DD E+ L N K + + E+S
Sbjct: 40 DEEEKSKKKAVSKEKKTPAKQESSSD-DSSSDDSSDEDTKMPTKSKLKNGTKTKAKEESS 98
Query: 412 DNVSTSNDELPAEQP 426
+ S+S DE PA++P
Sbjct: 99 SSDSSSEDEPPAKRP 113
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 30.7 bits (66), Expect = 3.8
Identities = 37/196 (18%), Positives = 79/196 (40%), Gaps = 7/196 (3%)
Query: 238 DSDDMSSTEDYHKPRIVEGQSSSSMDRSPEERH-QRAKYRRKITGDSKSGRRQVTEAEAL 296
D+D D+H+ +V + + R E H Q A + K + G+ VT A+
Sbjct: 668 DADHRRQDADHHRQDVVHPRQDADHHRQDAEHHRQDADHIAKTS--FTIGKTSVTIAKTS 725
Query: 297 RAMQRLCSRIASQKMLVISSLENDCSKEELNRQIAVLQELQKKYVRLEMALQYSFFDSPQ 356
+ + A ++ ++ + + R + + L + ++E+ + S +
Sbjct: 726 VTIAKTSVAFAEASLVTVTITKAPMGRVS-RRSPSPERALAEVREKIEVPRRSSHMEDSS 784
Query: 357 NRRSMMVTPIQETPSLTLSESDMQVATDD-PGAENGNGVLTDPLLNRLKEQELEASDNVS 415
RS ++P++E S SE M+ + P + TD + + E ++SD+
Sbjct: 785 ANRS--ISPVKERASSKPSEKAMEAPSGKAPDTKQKERKKTDSDSDDDESSESDSSDDED 842
Query: 416 TSNDELPAEQPDAWDD 431
+S+ + D+ D
Sbjct: 843 SSDTSDSDDSSDSSSD 858
>SB_13907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 235 VPDDSDDMSSTEDYHKPRIVEGQSS----SSMDRSPEERHQRAKYRRKITGDSKSGRRQ 289
+P+ SD S +D HK + G+ SS +S + + ++R +K+GRRQ
Sbjct: 228 IPESSDSCLSDDDMHKHKKESGRKGTKEHSSHGKSKLDHSEAKRHREDSRDHNKAGRRQ 286
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 30.3 bits (65), Expect = 5.0
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 240 DDMSSTEDYHKPRIVE--GQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTE-AEAL 296
+ +SS D + E + +S+D ++ R++ D + R Q E E L
Sbjct: 672 ESLSSERDNKLLALTEQIAEKDNSLDELEKQNEALKVEHRQLQQDVVAFRNQSEELTERL 731
Query: 297 RAMQRLCSRIASQKMLVISSLENDCSKEELNRQIAVLQELQKKYVRLEMALQYSFFDSPQ 356
Q +R+ S + V+SS D S +LN++ LQ +++++ RL+ ++ + +
Sbjct: 732 DVAQ---NRLLSLQD-VLSS--RDESVRDLNQE---LQNMKEEHERLQNEMKLQGEELTE 782
Query: 357 NRRSMMVTPIQETPSLTLSESDMQVATDD 385
+ + V +Q SL L + +MQ A+ +
Sbjct: 783 QIKMLQVQLVQNDGSLKLQQDEMQKASSE 811
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 30.3 bits (65), Expect = 5.0
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 11 KRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPDTATSIKDTV 70
KR+EL KN + +E K++SSTP +P + T + LR+ A ++ V
Sbjct: 1443 KRLELNIIEKNKKIDDLEVLKMKSSTPL--TPGRDQRTREELRALRK----RAREAENEV 1496
Query: 71 DRHKRELVELEEELQSRVRSV 91
D K +L + E++L+S + V
Sbjct: 1497 DDVKEKLRDAEKKLKSAQKDV 1517
>SB_19380| Best HMM Match : DUF827 (HMM E-Value=0.06)
Length = 241
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 6 SRIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPDTATS 65
+R+EN + L+D KN L E+G ++ ++ L + A S
Sbjct: 62 NRLENLSVNLQDKVKNY-EHLNETGTERTNQLQEQLQETQEQIGDTREALEDINENLA-S 119
Query: 66 IKDTVDRHKRELVELEEELQSRVRSVSNQRVK 97
+K+ ++ + +EEE + +NQ ++
Sbjct: 120 LKENIEEEESGFKAVEEEFNKATEAYNNQNIQ 151
>SB_46164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 29.9 bits (64), Expect = 6.6
Identities = 22/91 (24%), Positives = 39/91 (42%)
Query: 255 EGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIASQKMLVI 314
+ + +S RSP+++ R + G S ++ AE RAM L QK+ V+
Sbjct: 206 DDEPPNSDRRSPDQKRPRPENIVLSNGFSNDVHGRMFSAEHARAMNILTRLFPEQKLNVL 265
Query: 315 SSLENDCSKEELNRQIAVLQELQKKYVRLEM 345
+ CS + + VL ++ R +M
Sbjct: 266 ELILKGCSGDIVQTIECVLPSHEEALARAQM 296
>SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 29.9 bits (64), Expect = 6.6
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 245 TEDYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKIT---GDSKSGRR-QVTEAEALRAMQ 300
T++ E +++ + EE +R YRR GD++S QVTE + ++ +
Sbjct: 1046 TDEAEDDSTAEARAAKRNTKVNEEVEERPSYRRSRLPDRGDTESSTNIQVTETDPIKLRE 1105
Query: 301 RLCSRIASQKMLVISSLENDCSKEELNRQIAVLQE 335
+L + + + + KE+L R+++ E
Sbjct: 1106 KLQEALIEVQQYKVKLEQAMQDKEKLERKLSSFSE 1140
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 29.9 bits (64), Expect = 6.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 238 DSDDMSSTEDYHKPRIVEGQSSSSMDRSPEERHQRAKYRRK 278
+++D ED QS + ++R P++RH+R +RR+
Sbjct: 804 NTNDEEELEDMSMAEKPGSQSDNELNRPPQDRHRRHHHRRR 844
>SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 29.5 bits (63), Expect = 8.7
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 236 PDDSDDMSSTEDYHKPRIVEGQ-SSSSMDRSPEERHQRAKYRRKITGDSKSGRRQ 289
P+D DD + +DY+ +EGQ S D PEE R + K + KS R+
Sbjct: 262 PEDDDD-DNGDDYNDDGEMEGQDKDSGDDYIPEEEELRDSWNDKERPNLKSNTRK 315
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 29.5 bits (63), Expect = 8.7
Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 7 RIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPDTATSI 66
R+EN++I LE ++ R+L E +I + E +SL LLR+ E + + +
Sbjct: 257 RLENEKIRLEHVLRDRERQLKEKDRIIEENKAD----YEEDLKSLKELLRKAEEKSKSKM 312
Query: 67 KDTVDRHKRELVELEEELQSRVRSV 91
K ++ ++ ++++ + ++ ++
Sbjct: 313 K-AINDYEIQILDFKSSFSEQISTL 336
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 315 SSLENDCSKEELNRQIAVLQELQKKYVRLEMALQYSFFDSPQNRRSMMVTPIQETPSLTL 374
++++ND +K+EL R +++ +K+ L+ LQ S D R+ + ++
Sbjct: 3497 ATVDNDITKDELERLKKIVENDEKEKENLKRKLQGSDSDGTMERKRLQRDMSDARAEISR 3556
Query: 375 SESDMQVATDD 385
E +++ DD
Sbjct: 3557 LEKEVKRLKDD 3567
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.128 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,818,861
Number of Sequences: 59808
Number of extensions: 627443
Number of successful extensions: 1975
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1951
Number of HSP's gapped (non-prelim): 44
length of query: 643
length of database: 16,821,457
effective HSP length: 87
effective length of query: 556
effective length of database: 11,618,161
effective search space: 6459697516
effective search space used: 6459697516
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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