Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000817-TA|BGIBMGA000817-PA|IPR001683|Phox-like
(643 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016443-9|AAC24273.1| 364|Caenorhabditis elegans Hypothetical ... 40 0.007
U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical pr... 39 0.013
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 37 0.051
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 33 0.62
AF100670-2|AAN73857.3| 554|Caenorhabditis elegans Hypothetical ... 33 0.82
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr... 32 1.4
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 32 1.4
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 32 1.4
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 31 1.9
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 31 1.9
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 31 1.9
Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical pr... 31 2.5
Z81130-12|CAB03421.2| 551|Caenorhabditis elegans Hypothetical p... 31 2.5
Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical pr... 31 2.5
Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical p... 31 2.5
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 31 2.5
AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin ... 31 2.5
AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like ... 31 2.5
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 31 3.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 3.3
AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical ... 30 4.4
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 30 4.4
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 30 5.8
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 30 5.8
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 30 5.8
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 30 5.8
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 30 5.8
L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical pr... 30 5.8
L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical pr... 30 5.8
L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical pr... 30 5.8
L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical pr... 30 5.8
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 30 5.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 30 5.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 30 5.8
AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical ... 29 7.7
>AF016443-9|AAC24273.1| 364|Caenorhabditis elegans Hypothetical
protein C17E7.4 protein.
Length = 364
Score = 39.5 bits (88), Expect = 0.007
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 241 DMSSTEDYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAEALRA-M 299
D +D ++E +S M + QR + RRK R E E++++ M
Sbjct: 131 DQKEGDDEDNEAMLERKSRYYMQKWENSEKQRREERRK-------QERYEQERESIQSVM 183
Query: 300 QRLCSRIASQKMLVISSLENDCSKEELNRQIAVLQELQKKYVRLE-MALQYSFFDSPQNR 358
+ +AS + L E D K+E+ R A ++L+ K +L+ M+ Y F S QN
Sbjct: 184 SNMAYCMASAQQLEQLKKERDQYKKEMRRYKAKCEQLESKCEQLQTMSPSYGAFQSMQNL 243
Query: 359 RSMMVTPIQETPSLTLSES 377
++ M+ +TP S
Sbjct: 244 QNPMLPSPFQTPQFPAPRS 262
>U88178-4|AAC24411.1| 460|Caenorhabditis elegans Hypothetical
protein W09C3.2 protein.
Length = 460
Score = 38.7 bits (86), Expect = 0.013
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 238 DSDDMSSTEDYHKPRIVEGQSSSSMDRSPEE-----RHQRAKYRRKIT--GDSKSGRRQV 290
D + S + H+ + EG +S R PEE R R + R + T G SKS R+QV
Sbjct: 131 DRNPKSLEQKSHQKNVGEGSKRTSSSRKPEEPERSRRDDRNRLRSEKTAQGSSKSLRKQV 190
Query: 291 TEAEALRAMQRLCSRIASQKMLVISSLENDCSKEELNRQI---AVLQELQKKYVRLEM-A 346
+ R+ + R +K +ISS +N SKE N + ++ K+ R +
Sbjct: 191 SN----RSKRSSSDREEREKPKMISSTKNIKSKESSNEKSQRGSIRTSAVKQVCRKNLDF 246
Query: 347 LQYSFFDSPQN 357
LQ +F P++
Sbjct: 247 LQQEYFQQPKS 257
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 36.7 bits (81), Expect = 0.051
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 15/170 (8%)
Query: 248 YHKPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIA 307
+ +P ++ S SS E + + Y+R+ S SG Q + L R S +
Sbjct: 76 HSQPCLIASGSRSSDIPPNESKMSTSAYQRRA---SASGD-QALDVPTLSQTNRGVS--S 129
Query: 308 SQKMLVISSLENDCSKEELN---RQIAVLQELQKKYVRLEMALQYSFFDSPQNRRSMMVT 364
+QK++ I EN K+EL+ R ++ LQ+++ Y RLE +Y + + +
Sbjct: 130 NQKLIQILREENVHLKKELDAFKRSLSKLQQIEYSYARLEKEYEYLANERKKQENLELNV 189
Query: 365 PIQ---ETPSLTLSESDMQVATDDPGAENGNGVLTDPLLNRLKE-QELEA 410
IQ LT+ D+Q+ + E ++ + +LN +++ QEL A
Sbjct: 190 IIQLEKSVKKLTIERDDLQMRLEKASTE--PTMVANLMLNEIQQRQELFA 237
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 33.1 bits (72), Expect = 0.62
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 16 EDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPDTATS 65
+D ++I E E+ SS+ SPD +++ +TE+ ++ PD++TS
Sbjct: 480 QDTTTSVILETTEATDAASSSLSPDDVSTQLTTEATTSVVSSVPPDSSTS 529
>AF100670-2|AAN73857.3| 554|Caenorhabditis elegans Hypothetical
protein M4.1 protein.
Length = 554
Score = 32.7 bits (71), Expect = 0.82
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 3 ELRSRIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPDT 62
EL I+ K + E K +IR L+E E+++ D S +TE LR D
Sbjct: 242 ELLKMIDEKT-KFEAKTKEMIRRLIEENG-ETTSRLKDMERSLETTEQTYQQLRSRNEDL 299
Query: 63 ATSIKDTVDRHKRELVELEE 82
T++ +T + + ELE+
Sbjct: 300 ETALAETTEMFDAKAAELEQ 319
>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical
protein F33H1.4 protein.
Length = 1385
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 237 DDSDDMSSTEDYHKPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGR--RQVTEAE 294
+D D ED+ +VEG S MD+ + + Q+ + GR RQ T ++
Sbjct: 59 EDEDPEFLNEDHEDDTLVEGDDRSDMDKIKQIQQQKMMIVTPMAQKRTRGRPPRQRTSSQ 118
Query: 295 ALRAMQRLCSRIASQKMLVISSLENDCSKE 324
A + + SQ +L LE S +
Sbjct: 119 AQMPDDLMDEELMSQDLLESGPLEGPGSSD 148
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 31.9 bits (69), Expect = 1.4
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 349 YSFFDSPQNRRSMMVTPIQETPSLTLSESDMQVATDDPGAENGNG-VLTD-PLLNRLKEQ 406
YS F S + + TP++ TP+ SD T P NG G V T P+ + E+
Sbjct: 422 YSHF-SLETHADAIKTPLR-TPAFDAVTSD----TSKP-LRNGPGQVFTALPISRKYMEK 474
Query: 407 ELEASDNVSTSNDELPAEQPDAWDDPLRRALEPDAPARNGAVAPTLVHLPLELDKA 462
L D T E P +PD+WD P PD P+ + + LVH P L K+
Sbjct: 475 ALLTDD--PTKPPESPEPRPDSWDSP-----SPDTPSSSDS---RLVH-PTTLPKS 519
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 31.9 bits (69), Expect = 1.4
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 349 YSFFDSPQNRRSMMVTPIQETPSLTLSESDMQVATDDPGAENGNG-VLTD-PLLNRLKEQ 406
YS F S + + TP++ TP+ SD T P NG G V T P+ + E+
Sbjct: 422 YSHF-SLETHADAIKTPLR-TPAFDAVTSD----TSKP-LRNGPGQVFTALPISRKYMEK 474
Query: 407 ELEASDNVSTSNDELPAEQPDAWDDPLRRALEPDAPARNGAVAPTLVHLPLELDKA 462
L D T E P +PD+WD P PD P+ + + LVH P L K+
Sbjct: 475 ALLTDD--PTKPPESPEPRPDSWDSP-----SPDTPSSSDS---RLVH-PTTLPKS 519
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 31.5 bits (68), Expect = 1.9
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 16 EDYAKNIIRELVESGKIESSTPSPDSPAS---------ETSTESLMHLLRQCEPDTATSI 66
+ Y +I + + SST + +PAS ET T S+ L A++I
Sbjct: 5 DSYRSSITSRPAFNRTVTSSTQNYGTPASGNRVLKIVTETHTSSVASGLSPYGQGAASTI 64
Query: 67 KDTVDRHKRELVELEEELQSRVRSV 91
+D +R K+E+ EL + L S + V
Sbjct: 65 RDDREREKKEITELNDRLASYIGKV 89
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 44 SETSTESLMHLLRQCEPDTATSIKDTVDRHKRELVELEEELQSRVRSV 91
+ET + S+ L + A++I+D +R K+E++EL + L S + V
Sbjct: 42 TETHSSSVSSGLSPYGQNAASTIRDNREREKKEIMELNDRLASYIEKV 89
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 31.5 bits (68), Expect = 1.9
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 16 EDYAKNIIRELVESGKIESSTPSPDSPAS---------ETSTESLMHLLRQCEPDTATSI 66
+ Y +I + + SST + +PAS ET T S+ L A++I
Sbjct: 5 DSYRSSITSRPAFNRTVTSSTQNYGTPASGNRVLKIVTETHTSSVASGLSPYGQGAASTI 64
Query: 67 KDTVDRHKRELVELEEELQSRVRSV 91
+D +R K+E+ EL + L S + V
Sbjct: 65 RDDREREKKEITELNDRLASYIGKV 89
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 31.5 bits (68), Expect = 1.9
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 44 SETSTESLMHLLRQCEPDTATSIKDTVDRHKRELVELEEELQSRVRSV 91
+ET + S+ L + A++I+D +R K+E++EL + L S + V
Sbjct: 42 TETHSSSVSSGLSPYGQNAASTIRDNREREKKEIMELNDRLASYIEKV 89
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 31.5 bits (68), Expect = 1.9
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 16 EDYAKNIIRELVESGKIESSTPSPDSPAS---------ETSTESLMHLLRQCEPDTATSI 66
+ Y +I + + SST + +PAS ET T S+ L A++I
Sbjct: 5 DSYRSSITSRPAFNRTVTSSTQNYGTPASGNRVLKIVTETHTSSVASGLSPYGQGAASTI 64
Query: 67 KDTVDRHKRELVELEEELQSRVRSV 91
+D +R K+E+ EL + L S + V
Sbjct: 65 RDDREREKKEITELNDRLASYIGKV 89
>Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/88 (20%), Positives = 39/88 (44%)
Query: 4 LRSRIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPDTA 63
L++++ + E +++ E +E + + E + + L RQ D
Sbjct: 169 LKTKLSEVERKFEKRSQDYYEMKAEKEMLEKRVENQKVSSHEMDSLQELKLARQKAQDQK 228
Query: 64 TSIKDTVDRHKRELVELEEELQSRVRSV 91
+ + HKR++V LEEE+++ V +
Sbjct: 229 EKAVEECNMHKRKIVGLEEEIRAMVEQL 256
>Z81130-12|CAB03421.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 31.1 bits (67), Expect = 2.5
Identities = 18/88 (20%), Positives = 39/88 (44%)
Query: 4 LRSRIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPDTA 63
L++++ + E +++ E +E + + E + + L RQ D
Sbjct: 169 LKTKLSEVERKFEKRSQDYYEMKAEKEMLEKRVENQKVSSHEMDSLQELKLARQKAQDQK 228
Query: 64 TSIKDTVDRHKRELVELEEELQSRVRSV 91
+ + HKR++V LEEE+++ V +
Sbjct: 229 EKAVEECNMHKRKIVGLEEEIRAMVEQL 256
>Z77659-8|CAB01170.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 31.1 bits (67), Expect = 2.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 267 EERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIA--SQKMLVISSLENDCSKE 324
+ER + + K+ S S + T EA L SR + S+K V L +DC+K+
Sbjct: 775 KERAEEKENEVKVALKSFSDEAEATRGEAREFSNTLKSRFSATSEKCKVTGELVSDCTKK 834
Query: 325 ELNRQIAVLQELQKKYV 341
+ ++L E K +
Sbjct: 835 ATDELSSLLDEFTKSTI 851
>Z77657-11|CAB01153.1| 958|Caenorhabditis elegans Hypothetical
protein F23B12.8 protein.
Length = 958
Score = 31.1 bits (67), Expect = 2.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 267 EERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIA--SQKMLVISSLENDCSKE 324
+ER + + K+ S S + T EA L SR + S+K V L +DC+K+
Sbjct: 775 KERAEEKENEVKVALKSFSDEAEATRGEAREFSNTLKSRFSATSEKCKVTGELVSDCTKK 834
Query: 325 ELNRQIAVLQELQKKYV 341
+ ++L E K +
Sbjct: 835 ATDELSSLLDEFTKSTI 851
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 31.1 bits (67), Expect = 2.5
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 250 KPRIVEGQSSSSMDRSPEERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIASQ 309
+PR G SSS RS R R + RR+ SK+ R+ + A+ A +R SR + Q
Sbjct: 137 RPRTRSGSRSSSRSRSGSRRSSRRRSRRR--SSSKARGRRASTAKKTPAKRRSRSR-SQQ 193
Query: 310 KM 311
K+
Sbjct: 194 KV 195
>AF295093-1|AAG03081.1| 958|Caenorhabditis elegans bimC kinesin
BMK-1 protein.
Length = 958
Score = 31.1 bits (67), Expect = 2.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 267 EERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIA--SQKMLVISSLENDCSKE 324
+ER + + K+ S S + T EA L SR + S+K V L +DC+K+
Sbjct: 775 KERAEEKENEVKVALKSFSDEAEATRGEAREFSNTLKSRFSATSEKCKVTGELVSDCTKK 834
Query: 325 ELNRQIAVLQELQKKYV 341
+ ++L E K +
Sbjct: 835 ATDELSSLLDEFTKSTI 851
>AB024428-1|BAC19818.1| 958|Caenorhabditis elegans kinesin like
protein KLP-14 protein.
Length = 958
Score = 31.1 bits (67), Expect = 2.5
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 267 EERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIA--SQKMLVISSLENDCSKE 324
+ER + + K+ S S + T EA L SR + S+K V L +DC+K+
Sbjct: 775 KERAEEKENEVKVALKSFSDEAEATRGEAREFSNTLKSRFSATSEKCKVTGELVSDCTKK 834
Query: 325 ELNRQIAVLQELQKKYV 341
+ ++L E K +
Sbjct: 835 ATDELSSLLDEFTKSTI 851
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 30.7 bits (66), Expect = 3.3
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 3 ELRSRI--ENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEP 60
EL++R+ EN R +++E K++ + + D ++ +T+ H LR +
Sbjct: 212 ELKNRVASENSRATGAVQEAQVLQE-----KLQQALKALDEKTTKLTTQENAHKLRMDQF 266
Query: 61 DTATSIKDTVDRHKRELVELEEELQSRVRSVSNQRV 96
+ DT RHK+E+ LE E++ R ++ +V
Sbjct: 267 ED-----DTKKRHKKEIKALEVEVKKRNATIKEHQV 297
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 3.3
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 318 ENDCSKEELNRQIAVLQELQKKYVRLEMALQYSFFDSPQNRRSMMVTPIQETPS--LTLS 375
EN+ +L++ +QE++ K++ + AL FD + R SM ++E S T++
Sbjct: 397 ENERILSQLSQAKERIQEVEAKWITDKAALDRRLFDLVKERESMEKEYVEEKGSWTKTMN 456
Query: 376 ESDMQVATDDPGAENGNGVL 395
E D Q + E G L
Sbjct: 457 EKDRQAREERKRLEQKIGEL 476
>AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical
protein Y106G6D.1 protein.
Length = 287
Score = 30.3 bits (65), Expect = 4.4
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 318 ENDCSKEELNRQIAVLQELQKKYVRLEMALQYSFFDSPQNRRSMMVTPI-QETPSL-TLS 375
E C + E N+ LQE++K+ ++EM +++ ++ RR MM T + ++ P+L L
Sbjct: 110 ETICLRAE-NKHRLQLQEVEKEMKKMEMEIKFYQNENFSLRRMMMETTLPEQQPALKELF 168
Query: 376 ESDMQVATDDPGAENGNGVLTDPLLNRLKEQEL--EASDNVST 416
+ +++ T + + L+N ++E +L E D + T
Sbjct: 169 KMTLKLDTLENNFYESRKSINTKLINYMEECKLLQELKDEMLT 211
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 30.3 bits (65), Expect = 4.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 3 ELRSRIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTES 50
++ ++IE + +L +N+I L S++PSP SP TS S
Sbjct: 307 DINAKIETENHQLHQIEENVISALSTPTSTISASPSPPSPLPTTSGPS 354
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.9 bits (64), Expect = 5.8
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 264 RSPEERHQ--RAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIASQKMLVISSLENDC 321
R EER + R + R+I + + RRQ E E R + L A+++ + L+
Sbjct: 599 REEEERREKERREQERRIAAEKERKRRQEEEEEIAR-LNELQRAAAARQAQRNAELDRQR 657
Query: 322 SKEELNRQIAVLQELQKK 339
++EL+R+ L E + +
Sbjct: 658 QRDELDRKAQELSEREMR 675
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.9 bits (64), Expect = 5.8
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 264 RSPEERHQ--RAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIASQKMLVISSLENDC 321
R EER + R + R+I + + RRQ E E R + L A+++ + L+
Sbjct: 599 REEEERREKERREQERRIAAEKERKRRQEEEEEIAR-LNELQRAAAARQAQRNAELDRQR 657
Query: 322 SKEELNRQIAVLQELQKK 339
++EL+R+ L E + +
Sbjct: 658 QRDELDRKAQELSEREMR 675
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.9 bits (64), Expect = 5.8
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 264 RSPEERHQ--RAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIASQKMLVISSLENDC 321
R EER + R + R+I + + RRQ E E R + L A+++ + L+
Sbjct: 599 REEEERREKERREQERRIAAEKERKRRQEEEEEIAR-LNELQRAAAARQAQRNAELDRQR 657
Query: 322 SKEELNRQIAVLQELQKK 339
++EL+R+ L E + +
Sbjct: 658 QRDELDRKAQELSEREMR 675
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.9 bits (64), Expect = 5.8
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 264 RSPEERHQ--RAKYRRKITGDSKSGRRQVTEAEALRAMQRLCSRIASQKMLVISSLENDC 321
R EER + R + R+I + + RRQ E E R + L A+++ + L+
Sbjct: 599 REEEERREKERREQERRIAAEKERKRRQEEEEEIAR-LNELQRAAAARQAQRNAELDRQR 657
Query: 322 SKEELNRQIAVLQELQKK 339
++EL+R+ L E + +
Sbjct: 658 QRDELDRKAQELSEREMR 675
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 29.9 bits (64), Expect = 5.8
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 28 ESGKIESST--PSPDSPASETSTESLMHLLRQCEPDTATSIKDTVDRHKRELVELEEELQ 85
ES K+E ST P P++P + TS ES P T + K+ + E+ E ++EL
Sbjct: 601 ESVKVEDSTPEPEPETPVNSTSEES---------PKTNETEKNASSGNATEVKEKKKELP 651
Query: 86 SRVR 89
S VR
Sbjct: 652 SIVR 655
>L23646-9|AAM48529.1| 379|Caenorhabditis elegans Hypothetical
protein F44E2.7b protein.
Length = 379
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 267 EERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQ-RLCSRIASQKMLVISSLENDCSKEE 325
+ R A+Y RK D K + + + E +A R C ++ QK + + K
Sbjct: 52 QRRKAEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKTAAAAQIRETAEKAA 111
Query: 326 LNRQIAVLQ 334
+ R+++ +
Sbjct: 112 VARRMSTFE 120
>L23646-8|AAM48530.1| 411|Caenorhabditis elegans Hypothetical
protein F44E2.7c protein.
Length = 411
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 267 EERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQ-RLCSRIASQKMLVISSLENDCSKEE 325
+ R A+Y RK D K + + + E +A R C ++ QK + + K
Sbjct: 84 QRRKAEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKTAAAAQIRETAEKAA 143
Query: 326 LNRQIAVLQ 334
+ R+++ +
Sbjct: 144 VARRMSTFE 152
>L23646-7|AAA28038.3| 471|Caenorhabditis elegans Hypothetical
protein F44E2.7a protein.
Length = 471
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 267 EERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQ-RLCSRIASQKMLVISSLENDCSKEE 325
+ R A+Y RK D K + + + E +A R C ++ QK + + K
Sbjct: 144 QRRKAEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKTAAAAQIRETAEKAA 203
Query: 326 LNRQIAVLQ 334
+ R+++ +
Sbjct: 204 VARRMSTFE 212
>L23646-6|AAU87821.1| 469|Caenorhabditis elegans Hypothetical
protein F44E2.7d protein.
Length = 469
Score = 29.9 bits (64), Expect = 5.8
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Query: 267 EERHQRAKYRRKITGDSKSGRRQVTEAEALRAMQ-RLCSRIASQKMLVISSLENDCSKEE 325
+ R A+Y RK D K + + + E +A R C ++ QK + + K
Sbjct: 142 QRRKAEAEYERKRKADEKKKEKAIKDEEKRKAEDLRKCLQLQQQKTAAAAQIRETAEKAA 201
Query: 326 LNRQIAVLQ 334
+ R+++ +
Sbjct: 202 VARRMSTFE 210
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 2 LELRSRIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPD 61
LEL + + K+ D K +EL E K+ES + + A + E + + E D
Sbjct: 9625 LELEKQAQIKKAAEADAVKKQ-KELAEKQKLESEAATKKAAAEKLKLEEQAQINKAAEAD 9683
Query: 62 TATSIKDTVDRHK--------RELVELEEELQSRVRSVSNQRVK 97
K+ +++K E ++LEEE ++ + ++ K
Sbjct: 9684 AVKKQKELDEKNKLEANKKSAAEKLKLEEESAAKSKQTVEEQAK 9727
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 2 LELRSRIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPD 61
LEL + + K+ D K +EL E K+ES + + A + E + + E D
Sbjct: 9645 LELEKQAQIKKAAEADAVKKQ-KELAEKQKLESEAATKKAAAEKLKLEEQAQINKAAEAD 9703
Query: 62 TATSIKDTVDRHK--------RELVELEEELQSRVRSVSNQRVK 97
K+ +++K E ++LEEE ++ + ++ K
Sbjct: 9704 AVKKQKELDEKNKLEANKKSAAEKLKLEEESAAKSKQTVEEQAK 9747
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 2 LELRSRIENKRIELEDYAKNIIRELVESGKIESSTPSPDSPASETSTESLMHLLRQCEPD 61
LEL + + K+ D K +EL E K+ES + + A + E + + E D
Sbjct: 9645 LELEKQAQIKKAAEADAVKKQ-KELAEKQKLESEAATKKAAAEKLKLEEQAQINKAAEAD 9703
Query: 62 TATSIKDTVDRHK--------RELVELEEELQSRVRSVSNQRVK 97
K+ +++K E ++LEEE ++ + ++ K
Sbjct: 9704 AVKKQKELDEKNKLEANKKSAAEKLKLEEESAAKSKQTVEEQAK 9747
>AF098505-1|AAC67415.1| 536|Caenorhabditis elegans Hypothetical
protein Y71H10A.2 protein.
Length = 536
Score = 29.5 bits (63), Expect = 7.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 389 ENGNGVLTDPLLNRLKEQELEASDNVSTSNDELPAE 424
E +G+L DPL NR+++++ EA D + ++ E
Sbjct: 55 ERLSGLLHDPLFNRIRQEKPEAFDKLKAIGGDMMVE 90
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.128 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,308,249
Number of Sequences: 27539
Number of extensions: 460889
Number of successful extensions: 1591
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1574
Number of HSP's gapped (non-prelim): 46
length of query: 643
length of database: 12,573,161
effective HSP length: 86
effective length of query: 557
effective length of database: 10,204,807
effective search space: 5684077499
effective search space used: 5684077499
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -