GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000816-TA|BGIBMGA000816-PA|IPR001752|Kinesin, motor
region, IPR000253|Forkhead-associated, IPR008984|SMAD/FHA,
IPR001220|Legume lectin, beta domain
         (728 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   2.9  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    24   3.8  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              23   6.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   8.8  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   8.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/47 (25%), Positives = 19/47 (40%)

Query: 309 IPYRDSVLTWLLKDSLGGNSKTIMIAAISPADCNYGETLSTLRYANR 355
           +PY  S  TW +      N K  ++      +CN G       +AN+
Sbjct: 63  LPYSGSKCTWTITSYHRINLKCSLVEFSENKNCNAGSLTVKKNFANK 109


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 481 EEHSPIPDIVLSGPGV 496
           E+  P+ D+ +SGPG+
Sbjct: 343 EQQKPVADVAVSGPGL 358


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 181 VQDLSKHLVSDYDDIQECMHRGNL 204
           VQ+L    V+ + DI +C+ R N+
Sbjct: 17  VQNLRARSVNIFQDIADCVDRSNM 40


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 123 PRICRQLFSRVAAGKESGAS 142
           P IC+Q+  R A  +  GAS
Sbjct: 4   PNICKQILKRSAESEFEGAS 23


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/36 (27%), Positives = 19/36 (52%)

Query: 619 FLMQQEERQRRWNAEREELLQAQKKLDEEREAMEKE 654
           F+   EER+R+    +E+L + Q+ L    E +  +
Sbjct: 96  FIKSLEERERKHAVHKEQLSREQRFLRRRLEQLTNQ 131


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.131    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,822
Number of Sequences: 429
Number of extensions: 7499
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 5
length of query: 728
length of database: 140,377
effective HSP length: 63
effective length of query: 665
effective length of database: 113,350
effective search space: 75377750
effective search space used: 75377750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)