Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000815-TA|BGIBMGA000815-PA|IPR001965|Zinc finger,
PHD-type, IPR001487|Bromodomain, IPR011011|Zinc finger, FYVE/PHD-type
(332 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 77 2e-14
10_08_0006 - 14035990-14036135,14036246-14036339,14036845-140371... 72 7e-13
07_03_0538 + 19231318-19231382,19231652-19232390,19232468-192325... 71 2e-12
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 70 2e-12
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 68 1e-11
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 65 9e-11
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700... 64 2e-10
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 62 6e-10
01_06_0069 - 26169818-26169904,26170186-26170893 62 6e-10
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298... 60 2e-09
01_01_0802 + 6246267-6247541,6247625-6247682,6247806-6248129,624... 60 3e-09
08_01_0068 + 471729-472460,472578-472655,473270-473507,474130-47... 58 1e-08
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 54 2e-07
04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260 52 6e-07
04_04_1198 - 31679584-31679642,31679740-31679854,31680701-316807... 52 6e-07
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 51 1e-06
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 50 2e-06
03_02_0895 + 12230683-12230844,12230937-12230991,12231106-122311... 39 0.006
11_03_0135 - 10547460-10547558,10547926-10548086,10548183-105483... 34 0.18
07_01_0641 - 4790704-4790720,4790824-4791296,4791707-4792023,479... 34 0.18
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 33 0.24
10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 33 0.42
07_03_1360 - 25991173-25991261,25991496-25991586,25992318-259924... 31 0.98
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 31 0.98
02_01_0173 + 1190846-1191134,1191235-1191557,1191645-1191958,119... 31 0.98
12_02_1055 + 25725904-25726267,25726381-25726436 31 1.7
06_01_1173 + 10014391-10014678,10015478-10017245,10017333-100174... 31 1.7
03_02_0726 + 10722759-10722857,10722969-10723058,10723141-107232... 31 1.7
01_06_1574 + 38337669-38338196 30 2.3
12_02_0142 - 14306325-14306490,14306584-14306687,14306788-143069... 30 3.0
11_04_0130 + 13790349-13790431,13790590-13790704,13790832-13791053 30 3.0
01_07_0292 + 42560302-42560668,42560818-42560910,42563746-425639... 30 3.0
01_01_0595 - 4430738-4430785,4430904-4432679 30 3.0
12_01_0395 - 3117315-3118117,3118354-3118478,3118558-3118770,311... 29 3.9
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 29 3.9
11_06_0698 + 26385989-26389090 29 5.2
11_01_0297 - 2229109-2229279,2229515-2229904 29 5.2
08_01_0423 + 3740344-3740408,3740949-3741015,3742110-3742218,374... 29 5.2
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240... 28 9.1
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 28 9.1
02_05_0877 + 32403363-32404662,32406545-32406630,32406709-324070... 28 9.1
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 77.4 bits (182), Expect = 2e-14
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 187 RAARGPDAVQQ---LLRDVIKHKDSWPFYEPVSIE--DVPDYLDVIDQPMDLTTIKEKLE 241
R+A +A +Q LL+++ KH+ + PF PV + ++PDY D+I +PMDL TI++KL
Sbjct: 155 RSANYAEAFKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKLN 214
Query: 242 KSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFVNKR--CAELDLPSLPELS 299
YS+ + AD+ L F N TYN + V G L+ R E LPSL +
Sbjct: 215 AGMYSTPWDFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRWKFIEKKLPSLDD-K 273
Query: 300 FSKRKEAESQEHSAGPSSDDEDDLPIAKRKKHK 332
FS R+ E + A E D P K+ K
Sbjct: 274 FSVRR--EPSQKGAVKKDTIEKDYPSEKKHSTK 304
>10_08_0006 -
14035990-14036135,14036246-14036339,14036845-14037176,
14038040-14038094,14038682-14038750,14038940-14039039,
14039212-14039255,14039705-14039873,14040262-14040333,
14040439-14040519,14040586-14040650,14040796-14041260
Length = 563
Score = 71.7 bits (168), Expect = 7e-13
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 197 QLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEEL-IADI 255
Q+ ++ +H D+WPF EPV DVPDY D+I P+DL T+ +++E QY E+ +AD+
Sbjct: 481 QIFLNMNEHPDAWPFKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADM 540
Query: 256 ALIFHNCYTYNT 267
+F N TYN+
Sbjct: 541 KRMFSNAKTYNS 552
>07_03_0538 +
19231318-19231382,19231652-19232390,19232468-19232516,
19232600-19232664,19232774-19232828,19234107-19234225,
19234346-19234412,19235316-19235437,19235521-19235790
Length = 516
Score = 70.5 bits (165), Expect = 2e-12
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 198 LLRDVIKHKDSWPFYEPVS--IEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADI 255
+L+ ++ HK W F PV + +PDY DVI PMDL T+K KL QYS+ E AD+
Sbjct: 120 ILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQYSNPYEFAADV 179
Query: 256 ALIFHNCYTYN---TDTHPVA 273
L F N YN D H +A
Sbjct: 180 RLTFSNAMKYNPPGNDVHGIA 200
>06_03_0924 - 25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 173 RRSKNSLTNGVHEERAARGPDA-VQQLLRDVIKH----KDSWPFYEPVSIEDVPDYLDVI 227
RR+ +T + RG + + +L ++ H S+ F +PV+ ++ PDY D+I
Sbjct: 1688 RRTPADMTEYTPPAKRHRGGEVELSNILEKIVDHLRTMSCSFLFRKPVTKKEAPDYFDII 1747
Query: 228 DQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHP 271
++PMDL TI++K+ K +Y + E+ D+A I N +TYN + HP
Sbjct: 1748 ERPMDLGTIRDKVRKMEYKNREDFRHDVAQIALNAHTYNLNRHP 1791
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 67.7 bits (158), Expect = 1e-11
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 17/179 (9%)
Query: 162 HEKLNMSNGKDRRSKNSLTNGVHEERAARG-PDAVQQ---LLRDVIKHKDSWPFYEPVSI 217
+E + +GK + G + ++G PD ++Q ++R + H+ + PF +PV +
Sbjct: 44 NEVVGFYDGK-KHGSGGRKAGRKDSSLSKGMPDLMRQFGTIVRQITSHEWAEPFLKPVDV 102
Query: 218 E--DVPDYLDVIDQPMDLTTIKEKLE---KSQYSSDEELIADIALIFHNCYTYNTDTHPV 272
+ DY +I +PMD +TI++K+E ++Y++ E+ +D+ LIF N YN + H V
Sbjct: 103 VGLQLDDYYKIITKPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAMKYNDERHDV 162
Query: 273 -AKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSSDDEDDLPIAKRKK 330
A LEKF K L LP++ +RK+ + +E + P + + IAK K
Sbjct: 163 HIMAKSLLEKFEEKW-----LQLLPKVENEERKQ-KDEESNGVPKVNISPEEAIAKLAK 215
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 64.9 bits (151), Expect = 9e-11
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 201 DVIKHKDSWP-FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIF 259
D ++ KD++ F EPV E++PDY ++I+ PMD +TI+EKL Y++ E+ D+ L+
Sbjct: 209 DRLQKKDTYGVFSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFENDVFLLT 268
Query: 260 HNCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPE 297
N +YN+D + +E K L S PE
Sbjct: 269 SNAMSYNSDDTVYYRQARSIEALAKKDFENLRQASEPE 306
>02_04_0513 -
23569212-23569675,23569759-23569801,23569888-23570000,
23570099-23570158,23570472-23570541,23570887-23570951,
23571548-23571685,23571764-23573015
Length = 734
Score = 63.7 bits (148), Expect = 2e-10
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 198 LLRDVIKHKDSWPFYEPVSIE--DVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADI 255
+L+ ++ K S F PV ++PDY +I +PMDL TI+ KL+ Y+S E AD+
Sbjct: 168 ILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADV 227
Query: 256 ALIFHNCYTYNTDTHPVAKAGGRLEKFVNK--RCAELDLPSLPELSFSKRKEAESQEHSA 313
L F N TYN H V +L K R E L S+ + + A+S+
Sbjct: 228 RLTFSNAMTYNPRGHVVHDYAIQLNKMFESRWRTIEKKLASIATEAHVEVDRADSKRRKT 287
Query: 314 GP 315
P
Sbjct: 288 PP 289
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 62.1 bits (144), Expect = 6e-10
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 198 LLRDVIKHKDSWPFYEPVSIE--DVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADI 255
LL ++KHK W F +PV + DY +I PMDL TIK +L QY + E D+
Sbjct: 322 LLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDV 381
Query: 256 ALIFHNCYTYN 266
L FHN TYN
Sbjct: 382 RLTFHNAMTYN 392
>01_06_0069 - 26169818-26169904,26170186-26170893
Length = 264
Score = 62.1 bits (144), Expect = 6e-10
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 197 QLLRDVIKHKDSWPFYEPVSIEDVP--DYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
+LL +++H+D W F EPV + DY I PMDL T++ +LE+ +Y+ AD
Sbjct: 58 KLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRRYADPWAFAAD 117
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRLEK 281
+ L F+N +YN+ PV ++ L +
Sbjct: 118 VRLTFNNAMSYNSAGDPVYESAAELSE 144
>06_02_0325 +
14428065-14428799,14428916-14428993,14429607-14429844,
14431199-14431296,14431770-14432063,14432418-14432702
Length = 575
Score = 60.5 bits (140), Expect = 2e-09
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 186 ERAARGPDAVQQLLRDVIKHKDSWPFYEPVS--IEDVPDYLDVIDQPMDLTTIKEKLEK- 242
+R R A + ++ V+K + PF PV +PDY D+ID PMD TI + LE+
Sbjct: 234 QRDDRELTAALEAIKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERG 293
Query: 243 SQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSFSK 302
+Y + E++ D+ I+ NC YN+ + + R++K K L S + + ++
Sbjct: 294 DKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWLAAGLYSDVQENVTR 353
Query: 303 RKEAESQ 309
RK+ + +
Sbjct: 354 RKKEKDE 360
>01_01_0802 +
6246267-6247541,6247625-6247682,6247806-6248129,
6248321-6248355
Length = 563
Score = 59.7 bits (138), Expect = 3e-09
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 198 LLRDVIKHKDSWPFYEPV--SIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADI 255
LL ++KHK SW F PV S + DY +I +PMDL T+K +L Y S E D+
Sbjct: 149 LLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAAGHYKSPREFAGDV 208
Query: 256 ALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAELD 291
L F N YN V +L ++ E++
Sbjct: 209 RLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIE 244
>08_01_0068 +
471729-472460,472578-472655,473270-473507,474130-474205,
474820-474961,475326-475619,476037-476249
Length = 590
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 186 ERAARGPDAVQQLLRDVIKHKDSWPFYEPVS--IEDVPDYLDVIDQPMDLTTIKEKLEK- 242
+R R A + ++ V+K + PF PV +PDY D+ID PMD TI + LE+
Sbjct: 233 QRDDRELTAALEAIKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERG 292
Query: 243 SQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEK 281
+Y + E++ D+ I+ NC YN+ + + R++K
Sbjct: 293 DKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKK 331
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 197 QLLRDVIKHKDSWPFYEPVSIEDVP--DYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
Q+L + K K S F PV +E + DY +I PMDL T+KE L +Y S E D
Sbjct: 143 QILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGRYPSHEAFATD 202
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRL 279
+ L F N YN H V + L
Sbjct: 203 VRLTFSNALRYNPADHHVHRYASNL 227
>04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260
Length = 456
Score = 52.0 bits (119), Expect = 6e-07
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 196 QQLLRDVIKHKDSWPFYEPVSIE--DVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIA 253
+Q+L + K K S F PV ++ + DY VI PMDL T++ L +Y S ++ A
Sbjct: 125 EQILAKLRKDKRSIWFNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAA 184
Query: 254 DIALIFHNCYTYNTDTHPVAKAGGRL 279
D+ L F N YN H V G L
Sbjct: 185 DVRLTFSNALRYNPAGHEVHTFAGDL 210
>04_04_1198 -
31679584-31679642,31679740-31679854,31680701-31680790,
31682207-31683010
Length = 355
Score = 52.0 bits (119), Expect = 6e-07
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 197 QLLRDVIKHKDSWPFYEPVSIE--DVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
Q+L + K K S F PV ++ + DY VI PMDL T++ L +Y S ++ AD
Sbjct: 7 QILAKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGRYPSHDDFAAD 66
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRL 279
I L F N YN H V G L
Sbjct: 67 IRLTFSNALRYNPAGHEVHTFAGDL 91
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 51.2 bits (117), Expect = 1e-06
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 198 LLRDVIKHKDSWP-FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEE 250
++ D ++ KD++ F EPV E++PDY DVI+ PMD T++ KL ++ Y S E+
Sbjct: 15 MILDKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFGTVRRKLARNAYRSFEQ 68
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 201 DVIKHKDSWP-FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIF 259
D ++ KD++ F +PV E++PDY D+I PMD +TI++KL K Y + E+ +
Sbjct: 115 DRLQKKDTYGVFSDPVDPEELPDYHDIIKHPMDFSTIRKKLNKGAYGNLEQFEVSVRAYG 174
Query: 260 HNCYTY 265
C+ +
Sbjct: 175 DFCWPF 180
>03_02_0895 +
12230683-12230844,12230937-12230991,12231106-12231169,
12231292-12231334,12231509-12231607,12231710-12231778,
12231912-12232245,12232317-12232471,12232592-12233287
Length = 558
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/80 (22%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 197 QLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIA 256
+ + D ++ +D+ + V DY + +++P D T+++K + Y++ E+ D+
Sbjct: 86 EYILDTLEMRDTHELFAMPDDIQVTDYAERVNRPGDFATLRQKNKDGMYNTLEQFENDVY 145
Query: 257 LIFHNCYTYNT-DTHPVAKA 275
++F + N+ DT P +A
Sbjct: 146 MVFQKAMSINSEDTIPYREA 165
>11_03_0135 -
10547460-10547558,10547926-10548086,10548183-10548306,
10548566-10548729,10549803-10549883,10549973-10550097,
10550200-10550430,10550566-10550588,10551055-10551539,
10551678-10552075,10552903-10552988,10553120-10553397,
10553494-10553714,10553927-10554018,10554148-10554213,
10555855-10556022
Length = 933
Score = 33.9 bits (74), Expect = 0.18
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 1 MQKVPEGDWFCDQCK 15
M +VPEGDWFC++C+
Sbjct: 116 MPEVPEGDWFCEECR 130
>07_01_0641 -
4790704-4790720,4790824-4791296,4791707-4792023,
4792094-4792423
Length = 378
Score = 33.9 bits (74), Expect = 0.18
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 202 VIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHN 261
V++H + PF + +D D DV +P+ ++EK EK ++ SD + + + + N
Sbjct: 303 VLQHYNYRPFN--FNYDDDDDEDDVELEPI----VEEKFEKFEWDSDNDNVLEPGSMREN 356
Query: 262 CYTYNTDTHP 271
CY Y HP
Sbjct: 357 CYIYFLGFHP 366
>12_02_0133 -
14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 1 MQKVPEGDWFCDQCKPKEHKRSPRKKRKL 29
M++VPEG+W C++C E++ KK+KL
Sbjct: 261 MEEVPEGEWLCEEC---ENELEYEKKKKL 286
>10_08_1005 -
22179407-22180122,22180210-22180653,22180737-22180861,
22180939-22181169,22181250-22181805,22181896-22182312,
22182405-22183216,22183653-22183738,22184464-22184534,
22184553-22185573,22186018-22186062,22186252-22186326,
22186797-22186871
Length = 1557
Score = 32.7 bits (71), Expect = 0.42
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 1 MQKVPEGDWFCDQCKPKEHKRSPR 24
++KVP+G+W C++C KE + R
Sbjct: 465 LEKVPDGEWLCEECCLKEDENQTR 488
>07_03_1360 -
25991173-25991261,25991496-25991586,25992318-25992409,
25992586-25992673,25992826-25992888,25992975-25993086,
25993255-25993335,25993437-25993541,25993652-25993698,
25993793-25993912
Length = 295
Score = 31.5 bits (68), Expect = 0.98
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 301 SKRKEAESQEHSAGPSSDDEDDLPIAKRKKHK 332
SKRK + + S S DD+D+L + K+HK
Sbjct: 213 SKRKHDDDSDSSGESSGDDQDELDLPTYKRHK 244
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 31.5 bits (68), Expect = 0.98
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 1 MQKVPEGDWFCDQCKPKEH 19
+ ++PEG+W+C C+ K H
Sbjct: 1112 LARIPEGNWYCPSCQTKAH 1130
>02_01_0173 +
1190846-1191134,1191235-1191557,1191645-1191958,
1192302-1192461
Length = 361
Score = 31.5 bits (68), Expect = 0.98
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 1 MQKVPEGDWFCDQC-KPKEHKRSPRKKRK 28
+ +VP GDWFC C P H + +K
Sbjct: 66 LPRVPAGDWFCPSCASPSPHSKKSHAAKK 94
>12_02_1055 + 25725904-25726267,25726381-25726436
Length = 139
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 296 PELSFSKRKEAESQEHSAGPSSDDEDD 322
PE++ S ++A E AG SSD EDD
Sbjct: 52 PEMATSSDEDASDSEEEAGMSSDSEDD 78
>06_01_1173 +
10014391-10014678,10015478-10017245,10017333-10017436,
10017632-10017706,10017887-10017918,10019396-10019482,
10020848-10021294,10021477-10021630,10022203-10022329,
10022547-10022632,10022719-10022790,10023083-10023286,
10023732-10024049
Length = 1253
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Query: 3 KVPEGDWFCDQC--KPKEHKR 21
++PEGDWFC C +EH R
Sbjct: 150 EIPEGDWFCTDCMTAKEEHSR 170
>03_02_0726 + 10722759-10722857,10722969-10723058,10723141-10723245,
10723597-10723698,10724721-10724805,10725281-10725365,
10725473-10725517,10725685-10728672,10728839-10729055,
10729193-10729765
Length = 1462
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 1 MQKVPEGDWFCDQCK-PKEHKRS 22
++ VPE DW C QC+ PK K+S
Sbjct: 1425 LEAVPEHDWLCPQCEMPKATKKS 1447
>01_06_1574 + 38337669-38338196
Length = 175
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 4 VPEGDWFCDQCKPKEHKRSPRK 25
VPEG+W C C +E K + R+
Sbjct: 108 VPEGEWHCSSCIVQEEKETKRR 129
>12_02_0142 -
14306325-14306490,14306584-14306687,14306788-14306967,
14307155-14307253,14307346-14307535,14307722-14307748,
14308190-14308506,14308532-14308675,14308799-14308905,
14309085-14309357,14309470-14309827
Length = 654
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 265 YNTDTHP---VAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSSDDED 321
Y D H + G R+ + ++ E+ PE+ K+ + ++ + SS DED
Sbjct: 137 YTKDEHAKYQTLQNGSRMNRVMSALGLEIPARVHPEIVLDSGKKKKKKKKATRKSSSDED 196
Query: 322 DLPIAKRKKH 331
D+ + + K++
Sbjct: 197 DVEVEENKEN 206
>11_04_0130 + 13790349-13790431,13790590-13790704,13790832-13791053
Length = 139
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 249 EELIADIALIFHNCYTYNTDTHPVAKAGGRLEKF-VNKRCAELDLPSLPELSFSK 302
EE + +A F +C+ + +P+ KA GR ++ L LPSLP S +K
Sbjct: 84 EETSSLMATNFESCFHMSQLAYPLLKASGRGNIINISSAATSLALPSLPVYSAAK 138
>01_07_0292 +
42560302-42560668,42560818-42560910,42563746-42563969,
42564047-42564147,42564229-42564441,42564843-42565002
Length = 385
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 3 KVPEGDWFCDQCKP--KEHKRSPRKKRKL 29
+VP G WFC C P K KR P + K+
Sbjct: 103 RVPTGPWFCPPCAPRSKPVKRFPMTQTKI 131
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 4 VPEGDWFCDQCKPKEHKRSPRKK 26
+P+GDWFC C K+S K
Sbjct: 445 IPDGDWFCSVCTAAAAKKSKGNK 467
>12_01_0395 -
3117315-3118117,3118354-3118478,3118558-3118770,
3118850-3120076,3120537-3120622,3121197-3121223
Length = 826
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 8 DWFCDQCKPKEHKRSPRKKRKLYSEEDV---EEPPNRQVLSLN 47
DW CD+C P+ K + R+ ++ ++ ++P N+ L N
Sbjct: 51 DWSCDECHPRHGKGTNRRSLEVTLDDKTVVGKQPENQSSLDTN 93
>03_01_0085 +
690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 267 TDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPS 316
+D H GGR ++ N+ +EL PS+P+ S S ES H PS
Sbjct: 916 SDLHHDEVQGGRSGEWNNQHNSELWSPSMPQTSSSAHSNVES-HHDHYPS 964
>11_06_0698 + 26385989-26389090
Length = 1033
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 291 DLPSLPELSFSKRKEAESQEHSAGPSSDDEDDLPIAKRK 329
D+P+ E SF + +E + +E +A ED + +K+K
Sbjct: 851 DMPNWEEWSFVEEEEVQEEEAAAAAKEGGEDGIAASKQK 889
>11_01_0297 - 2229109-2229279,2229515-2229904
Length = 186
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/79 (20%), Positives = 38/79 (48%)
Query: 163 EKLNMSNGKDRRSKNSLTNGVHEERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDVPD 222
E ++N + + +K + ER A D Q L+++ + +SW E + ++ D
Sbjct: 95 EAARLANEERKATKAAAAQTRAAERRAFEKDFRQALMKERAEKLESWREKEKLKVQKKAD 154
Query: 223 YLDVIDQPMDLTTIKEKLE 241
+ +++ + + ++KLE
Sbjct: 155 HRELLRKKSSMWVAEDKLE 173
>08_01_0423 +
3740344-3740408,3740949-3741015,3742110-3742218,
3742320-3742447,3742899-3743324
Length = 264
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 305 EAESQEHSAGPSSDDEDDLPIAKRKKH 331
E E QE G + D DD+P AKR+KH
Sbjct: 238 EEEGQEDGEGHAPAD-DDVPCAKRRKH 263
>09_06_0244 + 21822811-21823246,21823337-21823468,21823949-21824037,
21824135-21824224,21825033-21825603,21826097-21826734,
21826978-21827098,21827223-21827337,21828234-21829723,
21829830-21829901,21830151-21830196,21830413-21830515,
21830591-21830674,21831035-21831475,21831651-21831746,
21831896-21832045,21832131-21832274,21832414-21832527,
21832621-21832803,21832901-21832945,21833058-21833192
Length = 1764
Score = 28.3 bits (60), Expect = 9.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 3 KVPEGDWFCDQCK 15
KVP G WFC CK
Sbjct: 1311 KVPRGQWFCKPCK 1323
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 96 EPRPPPGAARWLCAACLAPT----RESEDSDYNTTLVKLKKRKQRHSNDAVP 143
+P+PP GA + +CA C PT ++ + Y + ++ +Q H N+ P
Sbjct: 112 QPQPPVGA-KGVCAVCFRPTTFRCKQCKAVKYCSFKCQIAHWRQGHKNECRP 162
>02_05_0877 +
32403363-32404662,32406545-32406630,32406709-32407077,
32407174-32407257,32407362-32407784,32408368-32408434,
32409238-32409430,32409577-32409680,32409787-32409990,
32410174-32410427,32410511-32410735,32410812-32411033,
32411109-32411162,32411337-32411402,32411496-32411633,
32411979-32412032,32412334-32412393,32412975-32413340,
32413415-32413582
Length = 1478
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 171 KDRRSKNSLTNGVHEE-------RAARGPDAVQQLLRDVIKHKDSWP 210
+ RS+ S+ G+HE RG +V+Q + +V+ +++WP
Sbjct: 168 RSERSEQSVEQGIHEVIVRQFVGNKERGEQSVEQGIHEVVVQQENWP 214
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,229,845
Number of Sequences: 37544
Number of extensions: 411182
Number of successful extensions: 1048
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 998
Number of HSP's gapped (non-prelim): 50
length of query: 332
length of database: 14,793,348
effective HSP length: 82
effective length of query: 250
effective length of database: 11,714,740
effective search space: 2928685000
effective search space used: 2928685000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -