Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000815-TA|BGIBMGA000815-PA|IPR001965|Zinc finger,
PHD-type, IPR001487|Bromodomain, IPR011011|Zinc finger, FYVE/PHD-type
(332 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 89 5e-18
SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_4331| Best HMM Match : Bromodomain (HMM E-Value=3.30006e-41) 77 2e-14
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 69 4e-12
SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16) 65 7e-11
SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25) 64 2e-10
SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 5e-08
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 56 5e-08
SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35) 49 5e-06
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 47 2e-05
SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_23755| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_54984| Best HMM Match : Bromodomain (HMM E-Value=4.1) 38 0.015
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.026
SB_11349| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_52367| Best HMM Match : RnaseH (HMM E-Value=0.53) 34 0.19
SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23) 33 0.43
SB_26550| Best HMM Match : RBB1NT (HMM E-Value=9) 31 1.00
SB_21130| Best HMM Match : Smg4_UPF3 (HMM E-Value=1.5) 31 1.00
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18) 31 1.3
SB_56665| Best HMM Match : rve (HMM E-Value=8.6e-16) 30 2.3
SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_52329| Best HMM Match : DUF1059 (HMM E-Value=2.8) 30 2.3
SB_52004| Best HMM Match : rve (HMM E-Value=1.2e-16) 30 2.3
SB_41742| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_37116| Best HMM Match : rve (HMM E-Value=0.00013) 30 2.3
SB_28715| Best HMM Match : rve (HMM E-Value=5.4e-26) 30 2.3
SB_22427| Best HMM Match : rve (HMM E-Value=7.5e-12) 30 2.3
SB_20817| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_19109| Best HMM Match : RnaseH (HMM E-Value=1.6) 30 2.3
SB_4788| Best HMM Match : rve (HMM E-Value=0) 30 2.3
SB_952| Best HMM Match : rve (HMM E-Value=9.4e-26) 30 2.3
SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_46362| Best HMM Match : rve (HMM E-Value=3e-26) 30 2.3
SB_28694| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 30 2.3
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 30 2.3
SB_22848| Best HMM Match : RVT_1 (HMM E-Value=5.1e-15) 30 2.3
SB_21749| Best HMM Match : RnaseH (HMM E-Value=1.6) 30 2.3
SB_5227| Best HMM Match : RnaseH (HMM E-Value=1.8) 30 2.3
SB_3577| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 30 3.0
SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_43181| Best HMM Match : rve (HMM E-Value=1e-25) 30 3.0
SB_38087| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 29 4.0
SB_32718| Best HMM Match : Bromodomain (HMM E-Value=0.069) 29 4.0
SB_45235| Best HMM Match : CBM_20 (HMM E-Value=0.91) 29 5.3
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_21794| Best HMM Match : rve (HMM E-Value=5.4e-26) 29 5.3
SB_8019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13) 29 7.0
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_7143| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_51992| Best HMM Match : C2 (HMM E-Value=0.00041) 28 9.3
SB_50958| Best HMM Match : Hc1 (HMM E-Value=3.7) 28 9.3
SB_45746| Best HMM Match : FA_desaturase (HMM E-Value=0) 28 9.3
SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 89.0 bits (211), Expect = 5e-18
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 13/177 (7%)
Query: 166 NMSNGKDR-----RSKNSLTNGVHEERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDV 220
N N KDR R + L E+R + ++L + KH ++WPF EPV
Sbjct: 326 NDENSKDREDLEKRERKPLPPSCEEDRDEDLYTGMYKVLDYLKKHNNAWPFLEPVDESYA 385
Query: 221 PDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLE 280
P Y ++I+ PMDL+TI+EKL+ S+Y++ +E +D+ L+F NC YN K G LE
Sbjct: 386 PQYHEIIENPMDLSTIEEKLDTSKYATLDEFQSDMKLMFENCLEYNGPDSMYTKMGNTLE 445
Query: 281 KFVNKRCAE--------LDLPSLPELSFSKRKEAESQEHSAGPSSDDEDDLPIAKRK 329
N++ + D EL ++RKE + + G S DD P RK
Sbjct: 446 AAFNRQIKKHFPEDQENSDEDFEEELRKTRRKEMQKLQKKKGYSVDDFLPEPAMDRK 502
>SB_9343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 83.4 bits (197), Expect = 2e-16
Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
Query: 208 SWPFYEPVSIE--DVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTY 265
+WPFY+PV E + DY D+I QPMD+T IK KLE Y S E ADI L+F NCY Y
Sbjct: 338 AWPFYKPVDAEALGLHDYHDIIKQPMDMTEIKNKLENRAYDSPSEFAADIRLMFSNCYRY 397
Query: 266 NTDTHPVAKAGGRLEKFVNKRCAELDLPSL--PELSFSKRKEAESQEHSAGPSSDDE 320
N H V K +L+ + A++ ++ P + E E ++ SSD+E
Sbjct: 398 NPPDHDVVKMARQLQDVFEMKFAKMPEETIIAPPSPPPAQPEVEPEQQE---SSDEE 451
Score = 78.2 bits (184), Expect = 9e-15
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 190 RGPDAVQQLLRDVIK----HKDSWPFYEPVSIE--DVPDYLDVIDQPMDLTTIKEKLEKS 243
R + +Q LL+ V+K H +WPF EPV ++PDY +I +PMDL TIK+KLE +
Sbjct: 111 RTTNQLQFLLKTVLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMDLGTIKKKLENN 170
Query: 244 QYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSFS-K 302
+Y +E I D L+ +NCYTYN + ++K +++ A + P E+ K
Sbjct: 171 EYPCAQECIEDFRLMINNCYTYNKPGDDIVLMCQSMDKLFHQKIAMMP-PEEKEIIIGVK 229
Query: 303 RKEAE 307
RK E
Sbjct: 230 RKPGE 234
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 77.4 bits (182), Expect = 2e-14
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 168 SNGKDRRSKNSLTNGVHEERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVI 227
S+ R++K E R + + LL ++ +D+ PF PV++ D PDY D +
Sbjct: 70 SDRSRRQNKRQKIQEEEEPREESWVTSARILLNFLMSREDAEPFLAPVNLADFPDYTDYV 129
Query: 228 DQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNT 267
+QPMD +T+ K ++QYS E+L++DI L+F N YNT
Sbjct: 130 EQPMDFSTVWRKFVENQYSDPEQLVSDIRLVFSNSRAYNT 169
>SB_4331| Best HMM Match : Bromodomain (HMM E-Value=3.30006e-41)
Length = 305
Score = 77.4 bits (182), Expect = 2e-14
Identities = 35/95 (36%), Positives = 52/95 (54%)
Query: 195 VQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
++ +L V H +WPF +PV + PDY + I PMDL T+ E+L+ YSS + +AD
Sbjct: 208 LKNILTQVKNHASAWPFQKPVERAEAPDYYEHIKYPMDLKTMTERLKSGYYSSKKLFVAD 267
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAE 289
+ IF NC TYN+ K +E+F + E
Sbjct: 268 MRRIFQNCRTYNSPDTEYYKCANTVERFFLSKIKE 302
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 69.3 bits (162), Expect = 4e-12
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 122 DYNTTLVKLKKRKQRHSNDAVPLQNGTTXXXXXXXXXXXXHEKLNMSNGKDRRSKNSLTN 181
DY + K KK+++ HSN+ +P +K+ + R
Sbjct: 1382 DYALQMPKRKKKRRDHSNEVLPFAPSPPSRQLSEQEK----QKIQQNEESTMRELRIFLR 1437
Query: 182 GVHEERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLE 241
VH + L+ D + K+ F +PV +E+V DYLDVI +PMDL+T+ EK++
Sbjct: 1438 DVHHK-----------LIMDR-RFKE---FSKPVDLEEVEDYLDVIQEPMDLSTMMEKID 1482
Query: 242 KSQYSSDEELIADIALIFHNCYTYNTDTHPVAK 274
+ QYS+ + DI LI N YN D P+ K
Sbjct: 1483 RHQYSTCANYLLDIDLITSNALKYNPDRDPLDK 1515
>SB_55405| Best HMM Match : Bromodomain (HMM E-Value=5.5e-16)
Length = 657
Score = 65.3 bits (152), Expect = 7e-11
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 143 PLQNGTTXXXXXXXXXXXXHEKLNMSNGKDRRSKNSLTNGVHEERAARGPDAVQQLLRDV 202
P+QN HE G + + + + G +++L ++
Sbjct: 447 PVQNSYLRRPSPLKRSLSSHEGTTNPLGVRVKKEKTDSTGEMSSCTESNKMICEKILLEL 506
Query: 203 IKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEK---SQYSSDEELIADIALIF 259
H DS PF + VS + VP+Y VI PMDL+TI+ K++ YSS E ++D LIF
Sbjct: 507 FCHSDSIPFQQKVS-KSVPNYYKVITHPMDLSTIRAKIQPQHFQHYSSITEFLSDCQLIF 565
Query: 260 HNCYTYNTD 268
NC T+N D
Sbjct: 566 SNCATFNDD 574
>SB_34678| Best HMM Match : Bromodomain (HMM E-Value=9e-25)
Length = 1137
Score = 64.1 bits (149), Expect = 2e-10
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 208 SWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNT 267
SWPF++PV+ + VPDY +VI PMD+ T+++ ++ S EE + ++ L+ N YN
Sbjct: 816 SWPFHKPVNSKQVPDYYEVIKNPMDIETLRQHVQDGMCRSREEFLENVKLLHTNSVLYNG 875
Query: 268 DTHPVAKAGGRL 279
+ H K +
Sbjct: 876 ENHEFTKTANSI 887
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 194 AVQQLLRDVI-KHKD---SWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEK 242
A+Q L+ +I K K+ SWPF+ PV+ + VPDY ++ P+DL T++EK E+
Sbjct: 746 AMQLLMEGIINKMKEVDESWPFHTPVNPKTVPDYHKIVKNPIDLQTLREKEEE 798
>SB_32425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 59.7 bits (138), Expect = 3e-09
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 201 DVIKHKDSWP-FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIF 259
D ++ KD F +PV +V DYLDVI QPMD +T++ +++ + Y + E+ AD LI
Sbjct: 614 DQVQTKDPGEIFSDPVDTNEVLDYLDVIKQPMDFSTMRSRIDSNFYHTIEQFEADFNLII 673
Query: 260 HNCYTYN 266
NC YN
Sbjct: 674 ENCMAYN 680
>SB_2262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 56.8 bits (131), Expect = 2e-08
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 208 SWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNT 267
SW F PV D P Y VI PMD T+K KLE Y D+ L+ +NC+ YN
Sbjct: 566 SW-FLRPVDPNDAPGYYKVIRTPMDFGTVKHKLESGVYDDYSAFHDDMMLVKNNCFCYNP 624
Query: 268 DTHPVAKAGGRLEKFVNKRCAE-LDLPSLPELSFSKRKEAES 308
H V + +F A+ L+ +L SK K +S
Sbjct: 625 QGHDVRNDCDEVFRFYEIEYAKMLERWEKVQLKASKAKSDDS 666
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 55.6 bits (128), Expect = 5e-08
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 169 NGKDRRSKNSLT-NGVHEERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVI 227
+G+D N T + ++ ++ ++ + +L ++ KH D+WPF PV+ + P+Y +I
Sbjct: 1273 DGEDEEGDNQETRHHINRKQQSKDMAPCRTILAEMEKHDDAWPFLIPVNAKQFPEYYKII 1332
Query: 228 DQPMDLTTIKEKLEKSQYSSD 248
+PMD T+K KL QY ++
Sbjct: 1333 RKPMDFHTMKIKLRDYQYLTE 1353
Score = 32.3 bits (70), Expect = 0.57
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 3 KVPEGDWFCDQCKPKEHKRS-PRKKR--KLYSEED 34
K+P W C +CK + K S PR+KR K +SE D
Sbjct: 1227 KMPRVSWTCPKCKKRRAKNSTPRRKREKKKHSESD 1261
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 55.6 bits (128), Expect = 5e-08
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 194 AVQQLLRDVIKHK-DSWPFYEPVS--IEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEE 250
A+ L + K + +S PF PV + DY +++ PMDL+TIK KL+ QY + E
Sbjct: 887 ALMPTLEKLYKQEPESLPFRSPVDPKLLGCLDYFEIVRNPMDLSTIKRKLDNGQYKNPWE 946
Query: 251 LIADIALIFHNCYTYNTDTHPVAK 274
D+ L+F N + YN T V K
Sbjct: 947 YCDDVWLMFDNAWLYNRKTSRVYK 970
>SB_10642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 52.4 bits (120), Expect = 5e-07
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 195 VQQLLRDVIKHKD-------SWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSS 247
+++LL+ V+KH D + PF + +D+PDY +I QP+D+ I+E++ +Y
Sbjct: 853 MKRLLKYVVKHVDEDTGRSLAEPFLILPTKKDLPDYYQIIKQPVDIRKIRERINSHKYRC 912
Query: 248 DEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSFSK-RKEA 306
E+L D L+ N TYN + + +L+ + ++ + S EL K ++
Sbjct: 913 LEDLDEDFTLMCRNAQTYNMEGSIIFDDSIKLQSLFDHAMSK--VKSGEELHIPKTSQDQ 970
Query: 307 ESQEHSAGPSSDDED 321
ES + + D D
Sbjct: 971 ESDKDTTDREEGDND 985
>SB_737| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-35)
Length = 432
Score = 49.2 bits (112), Expect = 5e-06
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 221 PDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYN 266
P+Y I PMDL+ +KEKL QY S E + D+ LIF NC +N
Sbjct: 2 PEYYKQIANPMDLSIVKEKLHSYQYHSVVEFVRDMNLIFSNCKDFN 47
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 211 FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTH 270
F + S E+ PDY VI +P+ L+ I+ + ++Y+++EEL+ D ++F N YN +
Sbjct: 541 FMDLPSSEEYPDYYKVISEPVCLSQIEGNIRDNKYATEEELLLDFEVMFDNARYYNEEES 600
Query: 271 PV 272
V
Sbjct: 601 QV 602
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 210 PFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDT 269
PF S PDY +VI +P+ L I+ +++ Y S E L ++ L F+N TYN
Sbjct: 358 PFLRLPSRRAYPDYYEVIKKPIALMKIRSQIKSGLYDSLEALETELELCFNNAKTYNEPN 417
Query: 270 HPVAKAGGRLEKFVNKRCAEL 290
+ K R+ ++K+ E+
Sbjct: 418 SMLYKDAERMLDHMSKKKTEI 438
Score = 38.7 bits (86), Expect = 0.007
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 216 SIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTY 265
++ P+Y DVI P+DL I+++L+ +Y AD+ L+ N Y
Sbjct: 50 NLRSSPEYYDVISTPIDLLKIQQRLKTDEYEDVGTFTADMELLLDNALKY 99
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 8/141 (5%)
Query: 1 MQKVPEGDWFCDQCKPKEHKRSPRKKRKLYSEEDVE----EPPNRQVLSLNILKYXXXXX 56
++ +PEG+WFC C+PKE +R R +RK+ ++E+ + E + + + + +Y
Sbjct: 1658 IKHIPEGNWFCPDCRPKEPRRGER-RRKVPAQEESDSSEAESESEEESNSDTEEYEHSDS 1716
Query: 57 XXXXXXXXXXXXVCAACGSGGXXXXXXXXXXXXXXXXXXEPRPPPGAARWLCAACL-APT 115
CA C GG P W C C A
Sbjct: 1717 GEESAGESDHGDTCAVCSEGGELLCCDICPLAYHVHCAYPPLRRVPRGNWACQVCTGADE 1776
Query: 116 RESEDSDYNTTLVK--LKKRK 134
S + + +K LKK K
Sbjct: 1777 DRSSKARVKKSTIKEALKKAK 1797
>SB_17956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1449
Score = 46.0 bits (104), Expect = 4e-05
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 204 KHKDSWPFYE-PVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNC 262
K KD F+ PV+ P Y VI PMD +TIK K++ + Y++ E D L+ +N
Sbjct: 1266 KSKDIQGFFAYPVNDAIAPGYSRVITHPMDFSTIKTKIDSNSYTTIEAFRDDFYLMCNNA 1325
Query: 263 YTYNTDTHPVAKAGGRL 279
YN KA R+
Sbjct: 1326 MVYNAPDTIYFKAAKRI 1342
>SB_23755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 39.5 bits (88), Expect = 0.004
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 232 DLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEK-FVNK 285
DL+T+++K+ +Y++ E+ ++D+ IF NC +N P + LE FV K
Sbjct: 30 DLSTVEDKITSKKYATLEQFVSDVTRIFDNCRFFNGKDTPYYRCAEVLEAVFVQK 84
>SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1125
Score = 37.9 bits (84), Expect = 0.011
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 211 FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTY 265
F +P +E DYL + +P+DL+ +++ + K Y + ++ I HN Y
Sbjct: 529 FLQPFCLEKYDDYLQFVIKPVDLSLLEKNVRKKHYKTAKQFREHAQWILHNAIIY 583
>SB_54984| Best HMM Match : Bromodomain (HMM E-Value=4.1)
Length = 99
Score = 37.5 bits (83), Expect = 0.015
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 210 PFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQY 245
PF PV ++ PDY V+ P+DL TI EKL Y
Sbjct: 63 PFVYPVDVQAYPDYWSVVPYPIDLHTIIEKLGNRFY 98
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 36.7 bits (81), Expect = 0.026
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 197 QLLRDVIKHKDSWPFYEPVSIEDVP--DYLDVIDQPMDLTTIKEKLEKSQYSS 247
+LL D ++ +WPF EPV + + DY + I +PM TTI +K + Y+S
Sbjct: 66 ELLSDSYRNI-TWPFLEPVDAQSLGLYDYHERIKEPMCFTTIGQKFHEKVYTS 117
>SB_11349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 34.7 bits (76), Expect = 0.11
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 231 MDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYN 266
MDL TIK+ L +Y E + + L+F NC YN
Sbjct: 1 MDLGTIKDNLTLMRYEEAEAFVQHVRLVFINCDKYN 36
>SB_52367| Best HMM Match : RnaseH (HMM E-Value=0.53)
Length = 325
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQ-PMDLTTIKEKLEKSQYSSDEE 250
DAVQQ LR+VIK WP + E VP Y D+ D+ + I L+ Y+++E+
Sbjct: 140 DAVQQNLREVIKR--GWPESKTDLPECVPPYFDIPDELTVQEELIFNGLQLPSYNTEED 196
>SB_6176| Best HMM Match : Bromo_TP (HMM E-Value=1.5e-23)
Length = 684
Score = 32.7 bits (71), Expect = 0.43
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 5 PEGDWFCDQCKPKEHKRSPRKKRKL 29
P GDW+C C K+ K+ +KK K+
Sbjct: 653 PGGDWYCVHCTAKKAKKKKKKKSKV 677
>SB_26550| Best HMM Match : RBB1NT (HMM E-Value=9)
Length = 169
Score = 31.5 bits (68), Expect = 1.00
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 246 SSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKF-VNKRCAELD-LPSLPELSFSKR 303
++ +++ D IFH+ Y YN + AG E F + +LD +L + S+
Sbjct: 50 AASDDITVDFKTIFHDRYVYNVTNKRLTIAGTAREGFRFEPKYKQLDAFWTLRRVKTSRD 109
Query: 304 KEAESQ-EHSAGPS 316
+SQ E SAGP+
Sbjct: 110 PSGDSQYEPSAGPT 123
>SB_21130| Best HMM Match : Smg4_UPF3 (HMM E-Value=1.5)
Length = 565
Score = 31.5 bits (68), Expect = 1.00
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 177 NSLTNGVHEERAARGPDAVQQLLRDVI--KHKDSWPFYEPVSIEDVP------DYLDVID 228
N+++ G+ + + P A + L + V K S F++ + E P D+L ID
Sbjct: 30 NNMSTGIRPKCHEQCPKAHKNLSKSVFIDTKKPSEDFWKSLLQEKCPEDLTPDDFLSSID 89
Query: 229 QPMDLTTIKEKLEKSQYSSDEE 250
Q T+IKE + ++QY SD++
Sbjct: 90 QE---TSIKEHVNRTQYESDQQ 108
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 1 MQKVPEGDWFCDQCKPKEHKRSPRKKRKLYSEEDVEEPP 39
M +VP G+W C +C+ + + P R + D++EPP
Sbjct: 480 MMRVPTGEWKCPRCQIE--IQHPEMFRAFSRKNDMDEPP 516
>SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18)
Length = 134
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 1 MQKVPEGDWFCDQCKPKEHKRSPRKKRKLYSEEDVEEPP 39
M +VP G+W C +C+ + + P R + D++EPP
Sbjct: 42 MMRVPTGEWKCPRCQIE--IQHPEMFRAFSRKNDMDEPP 78
>SB_56665| Best HMM Match : rve (HMM E-Value=8.6e-16)
Length = 608
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 120 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 166
>SB_56580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 792 DAVQQNLREVIKR--GWPENKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 838
>SB_52329| Best HMM Match : DUF1059 (HMM E-Value=2.8)
Length = 364
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 212 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 258
>SB_52004| Best HMM Match : rve (HMM E-Value=1.2e-16)
Length = 869
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 589 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 635
>SB_41742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 905 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 951
>SB_37116| Best HMM Match : rve (HMM E-Value=0.00013)
Length = 383
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 162 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 208
>SB_28715| Best HMM Match : rve (HMM E-Value=5.4e-26)
Length = 359
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 69 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 115
>SB_22427| Best HMM Match : rve (HMM E-Value=7.5e-12)
Length = 270
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 36 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 82
>SB_20817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 304 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 350
>SB_19109| Best HMM Match : RnaseH (HMM E-Value=1.6)
Length = 305
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 208 DAVQQNLREVIKR--GWPESKTDLPECVNPYFDIRD---ELTVQEELIFKGQ 254
>SB_4788| Best HMM Match : rve (HMM E-Value=0)
Length = 1125
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 162 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 208
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 712 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 758
>SB_952| Best HMM Match : rve (HMM E-Value=9.4e-26)
Length = 455
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 42 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 88
>SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 268 DTHPVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSSDDEDDLPIAK 327
D H + K +E N C + P S K + A+S++H + S D +D P
Sbjct: 152 DDHFMVKRWDFIEN--NDPCCDSKSTKKPSKSSKKSEIAKSEKHKSAKSHDKKDKSPKRH 209
Query: 328 RKKH 331
+KH
Sbjct: 210 EEKH 213
>SB_46362| Best HMM Match : rve (HMM E-Value=3e-26)
Length = 455
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 42 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 88
>SB_28694| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 1045
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 870 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 916
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/95 (23%), Positives = 34/95 (35%)
Query: 96 EPRPPPGAARWLCAACLAPTRESEDSDYNTTLVKLKKRKQRHSNDAVPLQNGTTXXXXXX 155
EP G R T ESE + K KK+K++ S+ P + T
Sbjct: 363 EPEGKKGTKRGKKKTSKDATEESEAPNKKRKEKKKKKKKKKASSKIEPTETAETDDVTER 422
Query: 156 XXXXXXHEKLNMSNGKDRRSKNSLTNGVHEERAAR 190
++ ++ + DR SK +E A R
Sbjct: 423 AGLLLGNDAIDEDDDDDRDSKEDDAEDARQETARR 457
>SB_22848| Best HMM Match : RVT_1 (HMM E-Value=5.1e-15)
Length = 630
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 328 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 374
>SB_21749| Best HMM Match : RnaseH (HMM E-Value=1.6)
Length = 353
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 183 DAVQQNLREVIKR--GWPENKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 229
>SB_5227| Best HMM Match : RnaseH (HMM E-Value=1.8)
Length = 334
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 266 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 312
>SB_3577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1164
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 357 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRD---ELTVQEELIFKGQ 403
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/90 (22%), Positives = 33/90 (36%)
Query: 222 DYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEK 281
D D +LT +K +E + EEL +++ N + D + K +LE
Sbjct: 941 DLEDATANCYELTEVKRAMENKHFEQMEELHSNLNNALENAAKKDKDFEAIRKDKNQLES 1000
Query: 282 FVNKRCAELDLPSLPELSFSKRKEAESQEH 311
+ + EL L + KE H
Sbjct: 1001 KLEQVSEELQLSKRRVMEIEIEKEQLKSSH 1030
>SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 822
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 4 VPEGDWFCDQCKPKEHKRSPRKKRKLYSEEDVEEPPNRQ 42
+P+G+W C +C+ K+ + +K K E+ EE N +
Sbjct: 85 IPDGEWLCIECRNKQ--KQDQKNGKEVPEKGGEEKENEK 121
>SB_43181| Best HMM Match : rve (HMM E-Value=1e-25)
Length = 341
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D+ LT +E + K Q
Sbjct: 69 DAVQQNLREVIKR--GWPESKTDLPECVHPYFDIRDK---LTVQEELIFKGQ 115
>SB_38087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIE-DVPDYLDVIDQPMDLTTIK-EKLEKSQYSSDEE 250
+ +++L DV+K KD PFYE + E P ++++ T K E+L+K+ ++E
Sbjct: 35 EKAKKMLLDVVKAKDMAPFYEELCAEFKWPVDKPLLEKMKQKNTEKLEELDKTLKDAEEN 94
Query: 251 L 251
L
Sbjct: 95 L 95
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 29.9 bits (64), Expect = 3.0
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 1 MQKVPEGDWFCDQCKPKEHKRSPRKKRKLYSEEDVEE 37
+ ++P G+W C CKP + + ++D +E
Sbjct: 931 LDRIPLGEWKCPACKPVTRRERTNRSYNAEEQDDEDE 967
>SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 934
Score = 29.5 bits (63), Expect = 4.0
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP + E V Y D+ D +LT +E + K Q
Sbjct: 837 DAVQQNLREVIKR--GWPESKIDLPECVHPYFDIRD---ELTVQEELIFKGQ 883
>SB_32718| Best HMM Match : Bromodomain (HMM E-Value=0.069)
Length = 42
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 233 LTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAK 274
+ I+ KL QY + ++ +AD L+F N YN V K
Sbjct: 1 MAKIQSKLNGDQYQTLDDFMADFHLMFDNACKYNEPDSQVYK 42
>SB_45235| Best HMM Match : CBM_20 (HMM E-Value=0.91)
Length = 817
Score = 29.1 bits (62), Expect = 5.3
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 269 THPVAKAGGRLEKFVNKRCAE-LDLPSLPELSFSKRKEAESQEHSAGPSSDDEDDLPIAK 327
TH + A G + K E LD P LS S A+ + S DDE D +
Sbjct: 340 THAIRDANGHPLQKNKKETGECLDKEKAPGLSGSSAPIADEEAEMMDGSEDDESDKKQCE 399
Query: 328 RKKHK 332
+K+ K
Sbjct: 400 KKRDK 404
>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 7 GDWFCDQCKPKEHKRSPRKKRKLYS 31
G W C +EHKR RK+++LY+
Sbjct: 5 GSWSDAPCITREHKRLLRKRKRLYN 29
>SB_21794| Best HMM Match : rve (HMM E-Value=5.4e-26)
Length = 383
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP E V Y D+ D +LT +E + K Q
Sbjct: 69 DAVQQNLREVIKR--GWPESGTDLPECVRPYFDIRD---ELTVREELIFKGQ 115
>SB_8019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 193 DAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
DAVQQ LR+VIK WP E V Y D+ D +LT +E + K Q
Sbjct: 266 DAVQQNLREVIKR--GWPESGTDLPECVRPYFDIRD---ELTVREELIFKGQ 312
>SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13)
Length = 405
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 7 GDWFCDQCKPKEHKRSPRKKRKLYSEEDVEEPPNRQV 43
G W C CK K +P +K+K + + + PP R++
Sbjct: 246 GSWVCFLCKTK----TPGRKKKGHVDSPIVTPPRRKI 278
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 297 ELSFSKRKEAESQEHSAGPSSDDEDDLPIAKRKKHK 332
E K K E Q S+ SSD EDD K+K K
Sbjct: 170 EKRLKKEKNKEKQRDSSESSSDSEDDRKRRKKKVKK 205
>SB_7143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 13 QCKPKEHKRSPRKKRKLYSEEDVEEPPNRQVLSLN 47
+C+P EHKRS R+ ++ E +++ S+N
Sbjct: 49 KCEPSEHKRSTSVNRQTQAQRKCEPSEHKRSTSVN 83
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 13 QCKPKEHKRSPRKKRKLYSEEDVEEPPNRQVLSLN 47
+C+P EHKRS R+ ++ E +++ S+N
Sbjct: 70 KCEPSEHKRSTSVNRQTQAQHKCEPSDHKRSTSVN 104
>SB_51992| Best HMM Match : C2 (HMM E-Value=0.00041)
Length = 391
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 169 NGKDRRSKNSLTNGVHEERAARGPDAVQQLLRDVIKHKDSWP--FYEPVSIEDVPDYLDV 226
NGK + + N E+ AR +++ KHKD P YE S V + ++
Sbjct: 59 NGKHYQKLGDINNTKMFEKMARSLQQDLDAVKNAKKHKDPPPRFHYEDKSFTIVNSFPEL 118
Query: 227 IDQPMDLTTIK 237
D +++T ++
Sbjct: 119 SDSHVEITIVR 129
>SB_50958| Best HMM Match : Hc1 (HMM E-Value=3.7)
Length = 363
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 169 NGKDRRSKNSLTNGVHEERAARGPDAVQQLLRDVIKHKDSWP--FYEPVSIEDVPDYLDV 226
NGK + + N E+ AR +++ KHKD P YE S V + ++
Sbjct: 233 NGKHYQKLGDINNTKMFEKMARSLQQDLDAVKNAKKHKDPPPRFHYEDKSFTIVNSFPEL 292
Query: 227 IDQPMDLTTIK 237
D +++T ++
Sbjct: 293 SDSHVEITIVR 303
>SB_45746| Best HMM Match : FA_desaturase (HMM E-Value=0)
Length = 331
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 230 PMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDT 269
P ++ K LE +Y DEEL D+ +F +NT T
Sbjct: 119 PCSISFKKYHLEHHRYQGDEELDVDLPTMFEARMFFNTAT 158
>SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 7 GDWFCDQCKPKEHKRSPRKKRKLYSEEDVEEPPNRQ 42
G CD K K K+ +KK+K EED +E R+
Sbjct: 187 GSRSCDLEKVKRLKKKKKKKKKKKEEEDEKEDKQRK 222
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,599,046
Number of Sequences: 59808
Number of extensions: 468600
Number of successful extensions: 1211
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1150
Number of HSP's gapped (non-prelim): 90
length of query: 332
length of database: 16,821,457
effective HSP length: 82
effective length of query: 250
effective length of database: 11,917,201
effective search space: 2979300250
effective search space used: 2979300250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -