Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000815-TA|BGIBMGA000815-PA|IPR001965|Zinc finger,
PHD-type, IPR001487|Bromodomain, IPR011011|Zinc finger, FYVE/PHD-type
(332 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 79 6e-15
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 78 1e-14
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 77 1e-14
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 73 2e-13
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 71 2e-12
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 71 2e-12
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 69 6e-12
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 65 8e-11
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 58 7e-09
Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 52 4e-07
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 52 8e-07
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 52 8e-07
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 52 8e-07
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 52 8e-07
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 52 8e-07
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 51 1e-06
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 49 5e-06
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 49 5e-06
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 30 2.0
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 30 2.0
AC025716-22|AAK39613.1| 630|Caenorhabditis elegans Zwilch (dros... 30 2.0
AL032647-6|CAA21694.2| 271|Caenorhabditis elegans Hypothetical ... 29 4.6
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 29 6.1
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z78417-12|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 28 8.0
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 28 8.0
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 78.6 bits (185), Expect = 6e-15
Identities = 35/96 (36%), Positives = 57/96 (59%)
Query: 195 VQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
++ LL++ ++ + SWPF +PV ++VPDY DVI +PM+L T+ K+++ Y+ E+ D
Sbjct: 1329 IETLLKEAMRQECSWPFLQPVDSKEVPDYYDVIKRPMNLRTMMNKIKQRIYNKPIEVRND 1388
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAEL 290
LI NC TYN + + K L F+ R E+
Sbjct: 1389 FQLILSNCETYNEPENEIYKLSRELHDFMADRLDEI 1424
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 77.8 bits (183), Expect = 1e-14
Identities = 38/95 (40%), Positives = 57/95 (60%)
Query: 196 QQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADI 255
Q +L +++ ++ PF EPV+ + VP Y +I +PMDL TI++K EK Y + E+ DI
Sbjct: 1269 QLMLDELVVQANALPFLEPVNPKLVPGYKMIISKPMDLKTIRQKNEKLIYETPEDFAEDI 1328
Query: 256 ALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAEL 290
L+F NC +N D + +AG L KF KR +L
Sbjct: 1329 ELMFANCRQFNIDHSEIGRAGISLHKFFQKRWKQL 1363
Score = 35.5 bits (78), Expect = 0.053
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 MQKVPEGDWFCDQCKPKEHKR 21
M KVPEGDWFC +C+ ++ R
Sbjct: 1119 MTKVPEGDWFCQRCREEKSGR 1139
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 77.4 bits (182), Expect = 1e-14
Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 198 LLRDVIKHKDSWPFYEPV-SIE-DVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADI 255
+++D +KHK SWPF PV +I+ ++P+Y ++++ PMDL TI+++L Y E+ I DI
Sbjct: 294 VVKDALKHKHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAIKDI 353
Query: 256 ALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLP 296
+F NCY++N + V K LEK V + +L P
Sbjct: 354 NQVFINCYSFNPPEYDVYKMAKTLEKQVLSQLTQLPRSEKP 394
Score = 61.3 bits (142), Expect = 9e-10
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 213 EPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPV 272
+P+ ++ + DYL+VI PMDL TIK+KL+ QY+ EE + DI L+ NC YN P
Sbjct: 584 DPIKLK-IYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHDINLMVDNCCKYNPKGSPA 642
Query: 273 AKAGGRLEKFVNKR 286
L F +R
Sbjct: 643 HSNALELRSFFEQR 656
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 185 EERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQ 244
+ER + +L+ + K++WPF PV +++VP+Y D I P+D T++EKL++
Sbjct: 645 DERDDSLDSKIGAILKKLTADKNAWPFASPVDVKEVPEYYDHIKHPIDFKTMQEKLKRKA 704
Query: 245 YSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSF 300
Y+ IAD+ +F NCY +N K G +L N+ +L S PE S+
Sbjct: 705 YTHQHLFIADLNRLFQNCYVFNGAEAVYYKYGYKL----NELALKLLKTSFPESSW 756
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 70.5 bits (165), Expect = 2e-12
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 208 SWPFYEPVSIEDVP--DYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTY 265
+WPF EPV E + DY +I +PMDL ++K K+E Y + D+ L+ NC+ Y
Sbjct: 282 AWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLY 341
Query: 266 NTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSSDDEDDLPI 325
N PV G R ++ ++R AEL S S + + + SS ++ P
Sbjct: 342 NPVGDPVHSFGLRFQEVFDRRWAELGDSSSRASSVAPQSAPIAPTPKVAKSSAPKE--PK 399
Query: 326 AKRKKHK 332
RK+HK
Sbjct: 400 ESRKEHK 406
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 198 LLRDVIKHKDSWPFYEPVSIED--VPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADI 255
+L++ KHK WPF +PV +P Y + + +PMDL TI+ +L+ + Y+ +E I DI
Sbjct: 51 VLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDI 110
Query: 256 ALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSF---SKRKEAESQEHS 312
+F NCYT+N V + + + K + + +K+K A+S S
Sbjct: 111 ETVFQNCYTFNGKEDDVTIMAQNVHEVIKKSLEQAPREEHDMDVYWGKNKKKPAKSDGGS 170
Query: 313 AGPSSDDED 321
SS D
Sbjct: 171 KSSSSKKND 179
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 70.5 bits (165), Expect = 2e-12
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 208 SWPFYEPVSIEDVP--DYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTY 265
+WPF EPV E + DY +I +PMDL ++K K+E Y + D+ L+ NC+ Y
Sbjct: 282 AWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLY 341
Query: 266 NTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSSDDEDDLPI 325
N PV G R ++ ++R AEL S S + + + SS ++ P
Sbjct: 342 NPVGDPVHSFGLRFQEVFDRRWAELGDSSSRASSVAPQSAPIAPTPKVAKSSAPKE--PK 399
Query: 326 AKRKKHK 332
RK+HK
Sbjct: 400 ESRKEHK 406
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 198 LLRDVIKHKDSWPFYEPVSIED--VPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADI 255
+L++ KHK WPF +PV +P Y + + +PMDL TI+ +L+ + Y+ +E I DI
Sbjct: 51 VLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCAQECIDDI 110
Query: 256 ALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSF---SKRKEAESQEHS 312
+F NCYT+N V + + + K + + +K+K A+S S
Sbjct: 111 ETVFQNCYTFNGKEDDVTIMAQNVHEVIKKSLEQAPREEHDMDVYWGKNKKKPAKSDGGS 170
Query: 313 AGPSSDDED 321
SS D
Sbjct: 171 KSSSSKKND 179
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 68.5 bits (160), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%)
Query: 195 VQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
V +LL +++H+ S PF PV + + PDY I +PMDL+TI +K+E+++Y + + D
Sbjct: 258 VFELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVND 317
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAEL 290
+ +F N TYN + V K +++ +K+ ++
Sbjct: 318 VNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 353
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 68.5 bits (160), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%)
Query: 195 VQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
V +LL +++H+ S PF PV + + PDY I +PMDL+TI +K+E+++Y + + D
Sbjct: 2111 VFELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVND 2170
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAEL 290
+ +F N TYN + V K +++ +K+ ++
Sbjct: 2171 VNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 2206
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 68.5 bits (160), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%)
Query: 195 VQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
V +LL +++H+ S PF PV + + PDY I +PMDL+TI +K+E+++Y + + D
Sbjct: 537 VFELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVND 596
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAEL 290
+ +F N TYN + V K +++ +K+ ++
Sbjct: 597 VNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 632
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 68.5 bits (160), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%)
Query: 195 VQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
V +LL +++H+ S PF PV + + PDY I +PMDL+TI +K+E+++Y + + D
Sbjct: 355 VFELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVND 414
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAEL 290
+ +F N TYN + V K +++ +K+ ++
Sbjct: 415 VNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 450
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 68.5 bits (160), Expect = 6e-12
Identities = 31/96 (32%), Positives = 57/96 (59%)
Query: 195 VQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIAD 254
V +LL +++H+ S PF PV + + PDY I +PMDL+TI +K+E+++Y + + D
Sbjct: 250 VFELLELLLEHRMSTPFRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVND 309
Query: 255 IALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAEL 290
+ +F N TYN + V K +++ +K+ ++
Sbjct: 310 VNQMFENAKTYNPKGNAVFKCAETMQEVFDKKLIDV 345
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 64.9 bits (151), Expect = 8e-11
Identities = 28/71 (39%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 198 LLRDVIKHKDSWPFYEPV-SIE-DVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADI 255
+++D +KHK SWPF PV +I+ ++P+Y ++++ PMDL TI+++L Y E+ I D+
Sbjct: 294 VVKDALKHKHSWPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCAEDAIKDL 353
Query: 256 ALIFHNCYTYN 266
+F NC +N
Sbjct: 354 NTLFDNCKKFN 364
Score = 61.3 bits (142), Expect = 9e-10
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 213 EPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPV 272
+P+ ++ + DYL+VI PMDL TIK+KL+ QY+ EE + DI L+ NC YN P
Sbjct: 584 DPIKLK-IYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHDINLMVDNCCKYNPKGSPA 642
Query: 273 AKAGGRLEKFVNKR 286
L F +R
Sbjct: 643 HSNALELRSFFEQR 656
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 60.9 bits (141), Expect = 1e-09
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 168 SNGKDRRSKNSLTNGVHEERAARGPDAVQQLL---RDVIKHKDSWPFYEPVSIE--DVPD 222
S K++++K T E+ D ++ LL + K +D+ PF PV + ++PD
Sbjct: 843 SKPKEQQAKREPTPPPTEDTVFSQEDLIKFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPD 902
Query: 223 YLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRL-EK 281
Y ++I +PMDL T+ +KL QY + + DI L+ N + YN V K G +L E
Sbjct: 903 YHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEM 962
Query: 282 FVNK 285
FV++
Sbjct: 963 FVSE 966
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 60.9 bits (141), Expect = 1e-09
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 168 SNGKDRRSKNSLTNGVHEERAARGPDAVQQLL---RDVIKHKDSWPFYEPVSIE--DVPD 222
S K++++K T E+ D ++ LL + K +D+ PF PV + ++PD
Sbjct: 832 SKPKEQQAKREPTPPPTEDTVFSQEDLIKFLLPVWEKLDKSEDAAPFRVPVDAKLLNIPD 891
Query: 223 YLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRL-EK 281
Y ++I +PMDL T+ +KL QY + + DI L+ N + YN V K G +L E
Sbjct: 892 YHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKLSEM 951
Query: 282 FVNK 285
FV++
Sbjct: 952 FVSE 955
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 58.4 bits (135), Expect = 7e-09
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 11/117 (9%)
Query: 208 SWPFYEPVSIE--DVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTY 265
++PF +PV + + DY +VI +PMD++TI++KL +Y + E D L+ +NC TY
Sbjct: 138 TFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEEYDTAVEFKEDFKLMINNCLTY 197
Query: 266 NTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSSDDEDD 322
N + PVA + K K A+ + F + ++ QE SD+EDD
Sbjct: 198 NNEGDPVADFALQFRK---KFAAKW------KKEFPEDGDSFGQEKGEKEGSDNEDD 245
>Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical
protein C01H6.7 protein.
Length = 636
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 198 LLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIAL 257
+LR +++ F PV+ PDY D+I PMDL TI+E +E +Y+S + D L
Sbjct: 159 ILRKLVEKDPEQYFAFPVTPSMAPDYRDIIKTPMDLQTIRENIEDGKYASLPAMKEDCEL 218
Query: 258 IFHNCYTYNTDTHPVAKAGGRLEKFV 283
I N + YN A RL +
Sbjct: 219 IVSNAFQYNQPNTVFYLAAKRLSNLI 244
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 218 EDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGG 277
+++PDY VI +PMD I +K+E +Y+ EEL D+ L+ +N TYN + + +
Sbjct: 1215 KELPDYYQVISKPMDFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSE 1274
Query: 278 RLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSS 317
+ K ++ + P P K+KE + S+ S
Sbjct: 1275 TIGKLWKEQYDKFMNPPKPVEEPVKKKEPSTPSTSSSRPS 1314
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 218 EDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGG 277
+++PDY VI +PMD I +K+E +Y+ EEL D+ L+ +N TYN + + +
Sbjct: 1215 KELPDYYQVISKPMDFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSE 1274
Query: 278 RLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSS 317
+ K ++ + P P K+KE + S+ S
Sbjct: 1275 TIGKLWKEQYDKFMNPPKPVEEPVKKKEPSTPSTSSSRPS 1314
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 218 EDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGG 277
+++PDY VI +PMD I +K+E +Y+ EEL D+ L+ +N TYN + + +
Sbjct: 1215 KELPDYYQVISKPMDFDRINKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYVSSE 1274
Query: 278 RLEKFVNKRCAELDLPSLPELSFSKRKEAESQEHSAGPSS 317
+ K ++ + P P K+KE + S+ S
Sbjct: 1275 TIGKLWKEQYDKFMNPPKPVEEPVKKKEPSTPSTSSSRPS 1314
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 51.6 bits (118), Expect = 8e-07
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 216 SIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKA 275
S E+ P Y DVI +PMD+ IK KLE QY + ++++D L+ N +N + K
Sbjct: 742 SKEEFPAYYDVIKKPMDMMRIKHKLENRQYVTLLDVVSDFMLMLSNACKFNETDSDIYKE 801
Query: 276 GGRLEKFVNKRCAELD 291
L+K + + ELD
Sbjct: 802 AVSLQKALLEMKRELD 817
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 211 FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTH 270
F E S E PDY D I P+ + I ++L+ +Y + L+AD+ ++ N + YN ++
Sbjct: 368 FLELPSKESYPDYYDEIKNPVSIFMINKRLKNGKYDL-KSLVADLMQMYSNAFDYNLESS 426
Query: 271 PVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQ 309
V + +L+ C +L +P S+ + A +Q
Sbjct: 427 EVYISAEKLKALTISTCKQL----VPSFDVSQYEPAPAQ 461
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 210 PFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDT 269
PF S ED P Y + I +P+DL TI + +YS+ +EL D+ L+F N ++ +
Sbjct: 217 PFRVLQSREDFPLYYEKIAKPIDLKTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNG 276
Query: 270 HPVAKAGGRLEKFVNKRCAELD 291
+ K +L+ V ++ A L+
Sbjct: 277 SDIFKDAEQLKTVVKEKIARLE 298
Score = 46.0 bits (104), Expect = 4e-05
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 18/170 (10%)
Query: 114 PTRESEDSDYNTTLVKLKKRKQRHSNDAVPLQNGTTXXXXXXXXXXXXHEKLNMSNGKDR 173
P +SEDS K K K+ P +NG+ N + K +
Sbjct: 481 PDTDSEDSRTPPPTHKRKSPKK-------PRENGSVPTPTFKGRKSTIPVDPNAAYMKQK 533
Query: 174 RSKNSLTNGVHEERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDL 233
L N +H R A P H + F + S + P+Y +I P+D+
Sbjct: 534 AMMQGLWNVIHSYRVASNPG-----------HWPAGAFIQLPSAKQYPEYYQIIQNPIDM 582
Query: 234 TTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFV 283
TI+ +++ QY + +I D ++F N +N + +LEK V
Sbjct: 583 KTIRMRIDGHQYPQVDAMINDCRVMFSNARDFNEPRSMIHMDAIQLEKAV 632
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 221 PDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTD 268
P+Y + + +P+D+TTI+ KL+ +Y + ++ D + N TY D
Sbjct: 79 PEYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNNLTYYKD 126
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 51.6 bits (118), Expect = 8e-07
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 216 SIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKA 275
S E+ P Y DVI +PMD+ IK KLE QY + ++++D L+ N +N + K
Sbjct: 742 SKEEFPAYYDVIKKPMDMMRIKHKLENRQYVTLLDVVSDFMLMLSNACKFNETDSDIYKE 801
Query: 276 GGRLEKFVNKRCAELD 291
L+K + + ELD
Sbjct: 802 AVSLQKALLEMKRELD 817
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 211 FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTH 270
F E S E PDY D I P+ + I ++L+ +Y + L+AD+ ++ N + YN ++
Sbjct: 368 FLELPSKESYPDYYDEIKNPVSIFMINKRLKNGKYDL-KSLVADLMQMYSNAFDYNLESS 426
Query: 271 PVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAESQ 309
V + +L+ C +L +P S+ + A +Q
Sbjct: 427 EVYISAEKLKALTISTCKQL----VPSFDVSQYEPAPAQ 461
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 210 PFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDT 269
PF S ED P Y + I +P+DL TI + +YS+ +EL D+ L+F N ++ +
Sbjct: 217 PFRVLQSREDFPLYYEKIAKPIDLKTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNG 276
Query: 270 HPVAKAGGRLEKFVNKRCAELD 291
+ K +L+ V ++ A L+
Sbjct: 277 SDIFKDAEQLKTVVKEKIARLE 298
Score = 46.0 bits (104), Expect = 4e-05
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 18/170 (10%)
Query: 114 PTRESEDSDYNTTLVKLKKRKQRHSNDAVPLQNGTTXXXXXXXXXXXXHEKLNMSNGKDR 173
P +SEDS K K K+ P +NG+ N + K +
Sbjct: 481 PDTDSEDSRTPPPTHKRKSPKK-------PRENGSVPTPTFKGRKSTIPVDPNAAYMKQK 533
Query: 174 RSKNSLTNGVHEERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDVPDYLDVIDQPMDL 233
L N +H R A P H + F + S + P+Y +I P+D+
Sbjct: 534 AMMQGLWNVIHSYRVASNPG-----------HWPAGAFIQLPSAKQYPEYYQIIQNPIDM 582
Query: 234 TTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFV 283
TI+ +++ QY + +I D ++F N +N + +LEK V
Sbjct: 583 KTIRMRIDGHQYPQVDAMINDCRVMFSNARDFNEPRSMIHMDAIQLEKAV 632
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 221 PDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTD 268
P+Y + + +P+D+TTI+ KL+ +Y + ++ D + N TY D
Sbjct: 79 PEYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNNLTYYKD 126
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1 protein.
Length = 1291
Score = 51.6 bits (118), Expect = 8e-07
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 211 FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTH 270
F EPV ++ DY ++I+ P+ + I EKL +Y+ ++ +AD+ LI N YN T
Sbjct: 939 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 998
Query: 271 PVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAES---QEHSAGPSSD 318
K ++ + +L L E SF +R E S Q+ P+SD
Sbjct: 999 KDGKLIRQMANTLRDAIDDLIECELDE-SFVERIETVSRMLQDAGVTPTSD 1048
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1 protein.
Length = 1291
Score = 51.6 bits (118), Expect = 8e-07
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 211 FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTH 270
F EPV ++ DY ++I+ P+ + I EKL +Y+ ++ +AD+ LI N YN T
Sbjct: 939 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 998
Query: 271 PVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAES---QEHSAGPSSD 318
K ++ + +L L E SF +R E S Q+ P+SD
Sbjct: 999 KDGKLIRQMANTLRDAIDDLIECELDE-SFVERIETVSRMLQDAGVTPTSD 1048
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expression
abnormal protein protein.
Length = 1291
Score = 51.6 bits (118), Expect = 8e-07
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 211 FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTH 270
F EPV ++ DY ++I+ P+ + I EKL +Y+ ++ +AD+ LI N YN T
Sbjct: 939 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 998
Query: 271 PVAKAGGRLEKFVNKRCAELDLPSLPELSFSKRKEAES---QEHSAGPSSD 318
K ++ + +L L E SF +R E S Q+ P+SD
Sbjct: 999 KDGKLIRQMANTLRDAIDDLIECELDE-SFVERIETVSRMLQDAGVTPTSD 1048
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 51.2 bits (117), Expect = 1e-06
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 187 RAARGPDAVQQ-LLRDVIKH----KDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLE 241
RA P V +L D++ S F PV+ + V DY ++I P+ L IK+K+
Sbjct: 1452 RARADPKVVMSSMLTDIVNELKMISGSDAFVTPVNSKKVVDYYNIIKNPISLQEIKKKIS 1511
Query: 242 KSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAE 289
+ Y ++ + DI L+F N YN D + + ++ + KR E
Sbjct: 1512 EQSYLLRKDFLDDIKLMFDNSRMYNGDNNILTLTAQQMLQLAGKRMIE 1559
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 211 FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYN 266
F+ V + +P Y I PMDL+ +++K + +Y S +E + D I+ N +N
Sbjct: 1603 FHTRVDPKKIPAYYLKISDPMDLSIMEQKSKSQEYKSIDEFLKDAEKIYTNSVVFN 1658
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 51.2 bits (117), Expect = 1e-06
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 187 RAARGPDAVQQ-LLRDVIKH----KDSWPFYEPVSIEDVPDYLDVIDQPMDLTTIKEKLE 241
RA P V +L D++ S F PV+ + V DY ++I P+ L IK+K+
Sbjct: 1452 RARADPKVVMSSMLTDIVNELKMISGSDAFVTPVNSKKVVDYYNIIKNPISLQEIKKKIS 1511
Query: 242 KSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLEKFVNKRCAE 289
+ Y ++ + DI L+F N YN D + + ++ + KR E
Sbjct: 1512 EQSYLLRKDFLDDIKLMFDNSRMYNGDNNILTLTAQQMLQLAGKRMIE 1559
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 211 FYEPVSIEDVPDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYN 266
F+ V + +P Y I PMDL+ +++K + +Y S +E + D I+ N +N
Sbjct: 1603 FHTRVDPKKIPAYYLKISDPMDLSIMEQKSKSQEYKSIDEFLKDAEKIYTNSVVFN 1658
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 48.8 bits (111), Expect = 5e-06
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 163 EKLNMSNGKDRRSKNSLTNGVHE-ERAARGPDAVQQLLRDVIKHKDSWP-FYEPVSIEDV 220
E +M ++ R K+ L + + ER + + + Q + + +K D+ F EPV ++
Sbjct: 484 EIFDMIVRREERKKDMLNSYIRMFERGFKPTELLCQEVIEALKTIDAGKVFAEPV---EL 540
Query: 221 PDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLE 280
Y D+I+ P+ L + EK +YS+ L AD+ L+ NC T+N K G
Sbjct: 541 VGYTDIIENPICLKDMSEKAASGKYSTVAALSADVQLMLSNCATFNKGNRVYIKYGNTYR 600
Query: 281 K 281
K
Sbjct: 601 K 601
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 48.8 bits (111), Expect = 5e-06
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 163 EKLNMSNGKDRRSKNSLTNGVHE-ERAARGPDAVQQLLRDVIKHKDSWP-FYEPVSIEDV 220
E +M ++ R K+ L + + ER + + + Q + + +K D+ F EPV ++
Sbjct: 484 EIFDMIVRREERKKDMLNSYIRMFERGFKPTELLCQEVIEALKTIDAGKVFAEPV---EL 540
Query: 221 PDYLDVIDQPMDLTTIKEKLEKSQYSSDEELIADIALIFHNCYTYNTDTHPVAKAGGRLE 280
Y D+I+ P+ L + EK +YS+ L AD+ L+ NC T+N K G
Sbjct: 541 VGYTDIIENPICLKDMSEKAASGKYSTVAALSADVQLMLSNCATFNKGNRVYIKYGNTYR 600
Query: 281 K 281
K
Sbjct: 601 K 601
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 30.3 bits (65), Expect = 2.0
Identities = 9/14 (64%), Positives = 13/14 (92%)
Query: 1 MQKVPEGDWFCDQC 14
+Q+VPEG+WFC +C
Sbjct: 41 IQEVPEGEWFCAKC 54
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 30.3 bits (65), Expect = 2.0
Identities = 9/14 (64%), Positives = 13/14 (92%)
Query: 1 MQKVPEGDWFCDQC 14
+Q+VPEG+WFC +C
Sbjct: 41 IQEVPEGEWFCAKC 54
>AC025716-22|AAK39613.1| 630|Caenorhabditis elegans Zwilch
(drosophila) homolog protein1 protein.
Length = 630
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 251 LIADIALIFHNCYTYNTDTHPVAKAGG-RLEKFVNKRCAELDLPSLPEL 298
++ D+ +I + C T D +P+ + G L++++ C+E PS+ L
Sbjct: 123 MVGDVEIIGYECETSFFDANPIPLSDGVSLQRYIRLNCSEHFSPSISTL 171
>AL032647-6|CAA21694.2| 271|Caenorhabditis elegans Hypothetical
protein Y57A10B.7 protein.
Length = 271
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 163 EKLNMSNGKDRRSKNSLTNGVHEERAARGPDAVQQLLRDVIKHKDSWPFYEPVSIEDVPD 222
E++ + K S S + ++R A Q+ ++++ D
Sbjct: 32 EEVKTAQSKSYESDTSSAESLRQKRTAPSAIRTVQIQKEIVLPYDG-NLVSVYEKSSNTR 90
Query: 223 YLDVIDQPMDLTTIKEKLEKSQY 245
LD I +P DL K+K E+S+Y
Sbjct: 91 SLDTISEPGDLEEFKKKAEESKY 113
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 99 PPPGAARWLCAACLAPTRESEDSDYNTTLVKLKKRKQRH 137
PPP AA + C T + DS +TT + + + +H
Sbjct: 606 PPPAAASTISLPCQPSTSKEPDSSAHTTPISTRTVESKH 644
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 261 NCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSF--SKRKEAESQEHSAGPSSD 318
NC+T+N R F K+CA D S ++F K +E ++H A P +
Sbjct: 1381 NCFTFNIQDGENGLQSKRKWDFQFKKCAVFDGVSQSTVNFIEEKMRENTKKKHLATPKTV 1440
Query: 319 DEDDLPIAKR 328
D + K+
Sbjct: 1441 ISIDTSLLKQ 1450
>Z78417-12|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 261 NCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSF--SKRKEAESQEHSAGPSSD 318
NC+T+N R F K+CA D S ++F K +E ++H A P +
Sbjct: 1381 NCFTFNIQDGENGLQSKRKWDFQFKKCAVFDGVSQSTVNFIEEKMRENTKKKHLATPKTV 1440
Query: 319 DEDDLPIAKR 328
D + K+
Sbjct: 1441 ISIDTSLLKQ 1450
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 261 NCYTYNTDTHPVAKAGGRLEKFVNKRCAELDLPSLPELSF--SKRKEAESQEHSAGPSSD 318
NC+T+N R F K+CA D S ++F K +E ++H A P +
Sbjct: 1381 NCFTFNIQDGENGLQSKRKWDFQFKKCAVFDGVSQSTVNFIEEKMRENTKKKHLATPKTV 1440
Query: 319 DEDDLPIAKR 328
D + K+
Sbjct: 1441 ISIDTSLLKQ 1450
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,582,164
Number of Sequences: 27539
Number of extensions: 350772
Number of successful extensions: 1133
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1066
Number of HSP's gapped (non-prelim): 64
length of query: 332
length of database: 12,573,161
effective HSP length: 82
effective length of query: 250
effective length of database: 10,314,963
effective search space: 2578740750
effective search space used: 2578740750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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