Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000814-TA|BGIBMGA000814-PA|IPR011011|Zinc finger,
FYVE/PHD-type, IPR013136|WSTF/Acf1/Cbp146, IPR004022|DDT,
IPR001965|Zinc finger, PHD-type
(1015 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_1034 - 21865633-21865811,21865838-21865860,21866345-218664... 71 4e-12
01_06_1574 + 38337669-38338196 43 0.001
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 42 0.002
02_04_0228 - 21083917-21084067,21084489-21084577,21084662-210847... 41 0.006
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 38 0.041
06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,673... 37 0.071
08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-26... 36 0.16
01_05_0282 - 20347915-20348874,20348968-20349012,20349568-203498... 35 0.29
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 35 0.38
04_03_0948 - 21021021-21021040,21022743-21022818,21023167-210232... 34 0.50
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 34 0.66
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616... 33 1.2
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 33 1.2
02_01_0173 + 1190846-1191134,1191235-1191557,1191645-1191958,119... 33 1.5
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 32 2.7
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 32 2.7
01_07_0292 + 42560302-42560668,42560818-42560910,42563746-425639... 32 2.7
06_02_0105 - 11893666-11895483,11895661-11896422 31 3.5
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 31 3.5
12_01_1039 - 10699966-10700313,10700376-10700486,10700709-107008... 31 4.7
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 31 4.7
03_06_0316 + 33091194-33091370,33091451-33092155 31 4.7
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 31 6.2
07_03_1732 + 29109612-29110623,29110712-29110786,29111176-291113... 31 6.2
06_02_0001 - 10431189-10432634 31 6.2
02_05_0546 + 29889861-29890182,29891057-29892798 31 6.2
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 30 8.2
04_01_0085 - 932461-932464,932656-933002,933387-935041,935084-93... 30 8.2
>04_03_1034 -
21865633-21865811,21865838-21865860,21866345-21866433,
21872484-21872894,21872968-21873284,21873389-21873467,
21873539-21873903,21874484-21874656,21874824-21874913,
21875797-21875862,21876615-21876661
Length = 612
Score = 71.3 bits (167), Expect = 4e-12
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 1 MPLLKRKAFEKSTASEYLRDDDEVFHCEITDEIFKDYEEYCERIILVNSMVWTCEMTGKN 60
MPLLKR+ F + L +D+VF EY R+ L VWTC+++GK+
Sbjct: 41 MPLLKRRPFFLLDPPKDLNPEDKVFQVR----------EYLNRVNLYRERVWTCKVSGKS 90
Query: 61 NLTYSEALASEKAARNQLKDFPMELRIPILYLAARTNRCSFAEMSEDVFNFVRDRYFVGE 120
NLTY EAL SE A + + P EL P+L++ + + S ++ +++ +++ +F G
Sbjct: 91 NLTYEEALVSEHHAAEKAQQLPRELIAPVLHM-IQYSTLSLTDLVNKIYSILQEDFFEGL 149
Query: 121 TIEACLEG 128
+ +G
Sbjct: 150 ELNGRKDG 157
>01_06_1574 + 38337669-38338196
Length = 175
Score = 43.2 bits (97), Expect = 0.001
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 972 DPHAMLLCDACNAGHHLYCLTPPLQVQAVEKW 1003
D ++LCD C+ G+HLYCL PPL + +W
Sbjct: 82 DDEQIILCDGCDEGYHLYCLIPPLTLVPEGEW 113
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 42.3 bits (95), Expect = 0.002
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 976 MLLCDACNAGHHLYCLTPPLQVQAVEKW 1003
MLLCD C+ G HLYCL+PPL+ W
Sbjct: 271 MLLCDRCDKGWHLYCLSPPLESVPPGNW 298
>02_04_0228 -
21083917-21084067,21084489-21084577,21084662-21084731,
21084747-21084823,21084954-21085337,21085420-21085760,
21085869-21085950,21086033-21086391,21087084-21087204,
21087427-21087512,21088896-21088944,21089262-21089275,
21089467-21089545
Length = 633
Score = 40.7 bits (91), Expect = 0.006
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 55 EMTGKNNLTYSEALASEKAARNQLKDFPMELRIPILYLAARTNRCSFAEMSEDVFNFVRD 114
+++GK+NLT+ EAL SE A ++ + P EL P+L + + + E+ E ++ +++
Sbjct: 76 KISGKSNLTFEEALVSEHHAVSKAQKLPTELMAPVLRM-IQYSTLGLYELVEKIYASLQE 134
Query: 115 RYFVGETIEACLEG 128
F G + A +G
Sbjct: 135 AVFEGLELYAKQDG 148
Score = 38.7 bits (86), Expect = 0.023
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 740 DRPQWWVYHTEEQIEALIQSLNKRGIRESELRQSLELDKDNIIQYLRK 787
D +W Y T+E+++ L+ SLN +G+RE L++ L+ I L K
Sbjct: 542 DSKEWGYYSTKEELDVLMSSLNVKGLRERALKRQLDKLYSKISNALEK 589
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 37.9 bits (84), Expect = 0.041
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 972 DPHAMLLCDACNAGHHLYCLTPPL 995
D ++LLCD C++ +H YCL PPL
Sbjct: 1089 DDDSVLLCDKCDSEYHTYCLNPPL 1112
>06_01_0878 + 6735266-6735340,6735946-6736041,6738610-6738720,
6738816-6739309,6739422-6739587,6739666-6739789,
6739874-6739986,6740085-6740693,6743095-6743385,
6743845-6743913,6744099-6744188,6744281-6744696,
6744882-6744969
Length = 913
Score = 37.1 bits (82), Expect = 0.071
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 976 MLLCDA-CNAGHHLYCLTPPLQVQAVEKWQGTPGW 1009
++LCD C+ G H YCL PPL + + QG GW
Sbjct: 331 IILCDGICDRGFHQYCLNPPLLAEDIP--QGDEGW 363
>08_01_0036 - 267236-268165,268255-268299,268485-268574,269485-269805,
269895-270098,271532-271664,271810-271881,273106-273168,
273252-275034,275169-275217
Length = 1229
Score = 35.9 bits (79), Expect = 0.16
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 972 DPHAMLLCDACNAGHHLYCLTPPLQVQAVEKWQGT 1006
D +++CD C+ G+H+YC+ P KW T
Sbjct: 1151 DDDQIVMCDGCDEGYHIYCMRPARNTIPKGKWYCT 1185
>01_05_0282 - 20347915-20348874,20348968-20349012,20349568-20349816,
20350393-20350581,20351051-20351155,20351165-20351488,
20351493-20351555
Length = 644
Score = 35.1 bits (77), Expect = 0.29
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 972 DPHAMLLCDACNAGHHLYCLTPPLQVQAVEKW 1003
D +LCD C+ +HLYC+TP KW
Sbjct: 555 DDDLTILCDGCDEAYHLYCITPRRTSIPKGKW 586
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 34.7 bits (76), Expect = 0.38
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 976 MLLCDACNAGHHLYCLTPPLQVQAVEKWQ 1004
+L CD+C +HL CL PPL+ WQ
Sbjct: 44 LLCCDSCPRTYHLECLNPPLKRAPPGNWQ 72
>04_03_0948 - 21021021-21021040,21022743-21022818,21023167-21023214,
21023655-21023745,21024524-21024636,21024718-21024778,
21025816-21026007,21026029-21026762
Length = 444
Score = 34.3 bits (75), Expect = 0.50
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 973 PHAMLLCDACNAGHHLYCLTPPLQVQAVEKWQ 1004
P ML+CD+C A HL C P + ++W+
Sbjct: 215 PLKMLICDSCEAAFHLSCCIPRVHEVPTDEWK 246
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 33.9 bits (74), Expect = 0.66
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 972 DPHAMLLCDACNAGHHLYCL 991
D H+M++CDAC G HL CL
Sbjct: 313 DIHSMIICDACERGIHLKCL 332
>07_03_0697 +
20759176-20759817,20760592-20760708,20761422-20761696,
20761906-20762068,20762293-20762421,20762989-20763713,
20763853-20764081
Length = 759
Score = 33.1 bits (72), Expect = 1.2
Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 8/144 (5%)
Query: 234 GNPPEFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQESMDKFLXXXXXXX 293
GN E SSKK+ KS + + +HK + S + P+P + K
Sbjct: 5 GNSDELASSKKVKKSNSKEERKHKKGKHERPAASDEAPTPRSDAKGSKGKKRKHKDGEGE 64
Query: 294 XXXPKMPVDPAAKKSAQELAEKMRRAEDQMRQRXXXXXXXXXXXNARLQAYLKEWQKVKD 353
K + +K E AE RR +D++R+ + R +A ++ KV+
Sbjct: 65 KEHGKRSKE---RKGEGEAAE-ARRGDDKVRRAMEDERFAAARTDPRFRAMRRKEAKVEL 120
Query: 354 DLE----LEDHKMIPKGTPIDIEG 373
D L D + P+D G
Sbjct: 121 DSRFTSMLTDPRFSSSSAPVDKHG 144
>01_06_0213 + 27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 744 WWVYHTEEQIEALIQSLNKRGIRESELRQSLE 775
W V TEE ++L+ SL+ RG RE++L L+
Sbjct: 975 WRVLDTEEAFDSLVASLDTRGSREAQLHSMLQ 1006
>02_01_0173 + 1190846-1191134,1191235-1191557,1191645-1191958,
1192302-1192461
Length = 361
Score = 32.7 bits (71), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 976 MLLCDACNAGHHLYCLTPPLQVQAVEKW 1003
+LLCD C+ G H++CL P L W
Sbjct: 47 LLLCDGCDRGLHIFCLRPILPRVPAGDW 74
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 31.9 bits (69), Expect = 2.7
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Query: 183 VRRRKGIYSRDKNRLF-LKQFVE-HGPGGVICIKKSALNEYNISKVSFSQIFTGNPPEFE 240
V ++KG++ + + L L +F+E +GP + + A S S+ + +
Sbjct: 115 VPQKKGLFGKSDDFLTALDKFIEENGPEALKKLTNKAGKSSKQSGKSWKDSKSSKESKDS 174
Query: 241 SSKKLLKSPAATK--VQHKPASATKLNKSLKKPSPDKKGRQE 280
S K K P +K Q KP +K +K LK DKK +E
Sbjct: 175 KSSKESKEPKPSKDSKQLKPPKVSKESKPLKDSKEDKKAVKE 216
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.9 bits (69), Expect = 2.7
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 214 KKSALNEYNISKVSFSQIFTGNPPEFESSKKLLKSPAATK---VQHKPASATKLNKSLKK 270
KKSA+ E + VS S+ +G + + ++ K+ +A K V+ K + + K +KK
Sbjct: 6 KKSAV-EVAPTSVSVSEGKSGKKGKRNAEDEIEKAVSAKKQKTVREKVVPSKEEAKKVKK 64
Query: 271 PSPDKKGRQESMDKFLXXXXXXXXXXPKMPVDPAAKKSAQELAEK 315
P KK S ++ PK V P KK+AQ E+
Sbjct: 65 QPPPKKVESSSSEEDSSESEEEVKAQPKKTVQP--KKAAQPAKEE 107
>01_07_0292 +
42560302-42560668,42560818-42560910,42563746-42563969,
42564047-42564147,42564229-42564441,42564843-42565002
Length = 385
Score = 31.9 bits (69), Expect = 2.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 976 MLLCDACNAGHHLYCLTP 993
+LLCD C+ G H +CL P
Sbjct: 82 LLLCDGCDRGRHTFCLRP 99
>06_02_0105 - 11893666-11895483,11895661-11896422
Length = 859
Score = 31.5 bits (68), Expect = 3.5
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 305 AKKSAQELAEKMRRAEDQMRQRXXXXXXXXXXXNARLQAYLKEWQKVKDDLELEDHKMIP 364
+K A+E EK+R+A++ M R+QA LKE + K+ + L + P
Sbjct: 611 SKSIAREAQEKLRKAKEDMDH----AKSCLDTMEFRIQAVLKEMEATKESMRLAIDALRP 666
Query: 365 --KGTPIDIEGISQSHIGDFLSVLEFVHLYSNILKSKDFLH 403
P+DIE + + + E+ L + K+++ +H
Sbjct: 667 FDSELPVDIEEQGSQIV--TVDLDEYQSLIAKSSKAEELVH 705
>05_07_0112 - 27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 744 WWVYHTEEQIEALIQSLNKRGIRESELRQSLE 775
W + + E +AL+ SL+ RGIRES L L+
Sbjct: 1236 WRLIDSIETFDALVSSLDTRGIRESHLHSMLQ 1267
>12_01_1039 -
10699966-10700313,10700376-10700486,10700709-10700860,
10701226-10701284,10702805-10703040
Length = 301
Score = 31.1 bits (67), Expect = 4.7
Identities = 16/52 (30%), Positives = 21/52 (40%)
Query: 649 PRGPCRDKPLPSAPEHGEDTLTYVTRLFETEKERASSDKENDSAANSRGNSP 700
P PC PLP EHG TR + D+E D + G++P
Sbjct: 192 PVPPCLPPPLPLEEEHGFRMGMVTTRWPGAATATGNGDRERDRESEDEGDAP 243
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 31.1 bits (67), Expect = 4.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 976 MLLCDACNAGHHLYCLTPPLQ 996
M+ CD C G HL C+ PPL+
Sbjct: 174 MVECDVCLGGFHLRCVRPPLR 194
>03_06_0316 + 33091194-33091370,33091451-33092155
Length = 293
Score = 31.1 bits (67), Expect = 4.7
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 231 IFTGNPPEFESSKKL--LKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQESMDKFLXX 288
+ G + ++S KL ++PAA K + KPA+A K KP K + + K
Sbjct: 107 VAAGKLTKVKNSYKLPPTRAPAAAKPKAKPAAAA---KPKPKPKAAAKPKAAAKPKAKAP 163
Query: 289 XXXXXXXXPKMPVDPAAKKSA 309
PK PAAK A
Sbjct: 164 AKSKAAAKPKAAAKPAAKPKA 184
>09_04_0247 +
16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 30.7 bits (66), Expect = 6.2
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 618 DYSSYLGMDRAYRRYWLNQAVAGLFVEAGTEPRGPCR-DKPLPSAPEHGEDTLTYVTRLF 676
D SS G++ + + G E GTE P R +K P E ED +
Sbjct: 713 DNSSGEGIESSQGKPSQTSGPVGAVTEMGTEQIQPNRSEKSTPGINESSEDHQHKTDQGT 772
Query: 677 ETEKERASSDKENDSAANSRGNSP-KKPLTNINGLTHRNG 715
ET ++ S D NS SP +K +++ + NG
Sbjct: 773 ETAPKQVSDDLSPSEKKNSDDQSPGEKKVSDDQSTANLNG 812
>07_03_1732 +
29109612-29110623,29110712-29110786,29111176-29111333,
29111714-29111937,29112136-29112745
Length = 692
Score = 30.7 bits (66), Expect = 6.2
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 639 AGLFVEAGTEPRGPCRDKPLPSAPEHGEDTLTYVTRLFETEKERASSDKENDSAANSRGN 698
+G ++ +PR P ++ +P E GE T + F K+ ++++EN S +N
Sbjct: 136 SGQCLDKVDDPR-PFLEEGIPELEEEGERTPSNEEDGFAESKDDFANEEENFSESNDAFL 194
Query: 699 SPK----KPLTNINGLTHRNGFDD 718
SP P++N N ++ +N D
Sbjct: 195 SPSIETFVPVSNSNDVSDKNSSTD 218
>06_02_0001 - 10431189-10432634
Length = 481
Score = 30.7 bits (66), Expect = 6.2
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 13/126 (10%)
Query: 137 LSVTAQKQHPDSKAILSAASYVYEVEQYTDATPSTMGQIGTAPFDRVRRRKGIYSR---- 192
L V + S A++S SY + + Y D +G VRR K +
Sbjct: 144 LGVQCHVLYVSSAAMMSLCSY-FPI--YLD-NKDAGADVGDVDIPGVRRLKRSWLPQPLL 199
Query: 193 DKNRLFLKQFVEHG-----PGGVICIKKSALNEYNISKVSFSQIFTGNPPEFESSKKLLK 247
D N+LF KQF+E+G GV+ AL ++ + ++ G PP F
Sbjct: 200 DLNKLFTKQFIENGREMVKTDGVLINTFDALEPVALAALRDGKVVRGFPPVFAVGPHSSL 259
Query: 248 SPAATK 253
+ ATK
Sbjct: 260 ASEATK 265
>02_05_0546 + 29889861-29890182,29891057-29892798
Length = 687
Score = 30.7 bits (66), Expect = 6.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 972 DPHAMLLCDACNAGHHLYCL 991
D ++L+CDAC G HL CL
Sbjct: 218 DMESLLVCDACEKGAHLKCL 237
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 30.3 bits (65), Expect = 8.2
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 972 DPHAMLLCDACNAGHHLYCL 991
D + MLLCD C++ H YC+
Sbjct: 470 DDNLMLLCDICDSSAHTYCV 489
>04_01_0085 -
932461-932464,932656-933002,933387-935041,935084-935882,
936693-936707
Length = 939
Score = 30.3 bits (65), Expect = 8.2
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 16 EYLRDDDEVFHCEITDEIFKDYEEYCERIILVNSMVWTCEMTGKNNLTYSEALASEKAAR 75
E+L D+ + +EI +D + + +S WTC+ G NN+ + A +K+
Sbjct: 298 EFLTMDNYDSNPIFAEEILRDLRLPSD-FVDESSFFWTCDAAGNNNVDATTACYRQKSLE 356
Query: 76 NQLKDFPMELRIPILYL 92
++ P + +++L
Sbjct: 357 AKMFQHPSARSLRVIHL 373
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,154,655
Number of Sequences: 37544
Number of extensions: 1085594
Number of successful extensions: 2722
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2679
Number of HSP's gapped (non-prelim): 50
length of query: 1015
length of database: 14,793,348
effective HSP length: 89
effective length of query: 926
effective length of database: 11,451,932
effective search space: 10604489032
effective search space used: 10604489032
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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