Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000814-TA|BGIBMGA000814-PA|IPR011011|Zinc finger,
FYVE/PHD-type, IPR013136|WSTF/Acf1/Cbp146, IPR004022|DDT,
IPR001965|Zinc finger, PHD-type
(1015 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 128 3e-29
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 38 0.027
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 36 0.11
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 36 0.11
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 36 0.11
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 36 0.11
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 36 0.11
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 36 0.11
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 36 0.15
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 36 0.15
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 35 0.25
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 35 0.25
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 35 0.25
Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical pr... 34 0.59
AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1 ... 34 0.59
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 33 0.78
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 33 0.78
X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1 prot... 33 1.4
AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical ... 32 2.4
Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical pr... 31 3.1
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 31 3.1
Z67755-8|CAA91755.2| 322|Caenorhabditis elegans Hypothetical pr... 31 3.1
U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein. 31 3.1
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 31 4.1
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans Hypothetical p... 31 4.1
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans Hypothetical p... 31 4.1
Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical pr... 31 5.5
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 7.2
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 30 7.2
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 30 7.2
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 30 9.6
Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical pr... 30 9.6
AF077536-3|AAK31409.1| 726|Caenorhabditis elegans Hypothetical ... 30 9.6
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 128 bits (308), Expect = 3e-29
Identities = 91/292 (31%), Positives = 141/292 (48%), Gaps = 16/292 (5%)
Query: 1 MPLLKRKAFEKSTASEYLRDDDEVFHCEITDEIFKDYEEYCERIILVNSMVWTCEMTGKN 60
MPLL ++ FE + + + D VF+C+ T E+F +EEY R+IL+NS W+C +T K+
Sbjct: 16 MPLLHKQQFEPQSVPDGVTRDTPVFYCKATKEVFLTHEEYFNRMILLNSTAWSCSLTRKS 75
Query: 61 NLTYSEALASEKAARNQLKDFPMELRIPILYLAAR-TNRCSFAEMSEDVFNFVRDRYFVG 119
NLTY EA+ASE+ A +L +FP L IPI + + TNR F ++ D+++ ++DR+F
Sbjct: 76 NLTYFEAIASEREAEQELCNFPTALEIPITLIVHKYTNRGRFEDLVNDIYHILKDRFFNN 135
Query: 120 ETIEACLEGDHWTEAHILSVTAQKQHPD-------SKAILSAASYVYEVEQYTDATPS-- 170
E + + + + S ++Q+P + IL Q D S
Sbjct: 136 EEVAYAEKSRKFLAKIVESNQIEEQNPSFEGGSELKEPILPPPDTFRYTLQILDPAVSEE 195
Query: 171 TMGQIGTAPFDRVRRRKGIYSRDKNRLFLKQFVEHGPGGVICIKKSALNEYNISKVSFSQ 230
M + G A FDR+ R K I SR K RLFLK + P K E I + ++
Sbjct: 196 EMYREGIA-FDRLFRSKNIGSRQKIRLFLKNCCQMSPDSERYTLKFQFLE-KIDNLYWTD 253
Query: 231 IFTGNPPEFESSKKLL--KSPAATKVQHKPASATKLNKSLKKPS--PDKKGR 278
+ +G P + L ++P K K K + P+ P +GR
Sbjct: 254 VMSGAEPICPQTPALQRGRAPNTLKAGDHERKEKKPKKEERDPAAPPRPRGR 305
Score = 78.6 bits (185), Expect = 2e-14
Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 35/307 (11%)
Query: 721 QQLLICSGDLSTCKVHGKVDR--PQWWVYHTEEQIEALIQSLNKRGIRESELRQSLELDK 778
Q++ IC+G++ TC+VHG +W EQ E L++SLN RG RE EL + L +
Sbjct: 865 QEVFICTGNMDTCRVHGDESNNWTRWSYIRDREQFEQLLKSLNPRGNREVELLEELNEYR 924
Query: 779 DNIIQYLRKCPVKYLNGSAASDREAWRGTIMLRGYDKQADY-LTWGPNQMYRDDYHQPNG 837
++++ L + + D + W+ M + Y + W D +
Sbjct: 925 PSLLEILEETERLH---EEEEDEDEWKSQFMTNDPNPGDTYNIDW--------DAEMRDL 973
Query: 838 VLNIPQDLDETELESI----PVNKYRDPGYYLEAARV-----------NGVKVEGDELKA 882
+L+ + +D+ ++ SI N+ E+ V + V +E +
Sbjct: 974 LLDFEEKIDQGQMGSIEKIFECNRIEWRDNLKESGNVCMLLNEDISIFGEISVNLEESEH 1033
Query: 883 RRDVIRGLACALLQVSQAIHAKYLKRPL---GWDEKGRALSTEGGALARWQVSLLECXXX 939
D ++ LA A + ++IH K++K P DE G +E RWQ +LLEC
Sbjct: 1034 FSDSMK-LAIAFYMIIKSIHLKFIKAPYISPNKDEHGNLKPSE--LFIRWQRALLECESH 1090
Query: 940 XXXXXXXXXXXXSVCWRASVXXXXXXXXXXXXDPHAMLLCDACNAGHHLYCLTPPLQVQA 999
S+ W S H ++LC C+ +HL C + A
Sbjct: 1091 SALSLFISTFEGSIKWDKSRLQGKCRSCRRKAAAHDLVLCSECDNCYHLKCAKLDVNSDA 1150
Query: 1000 VEKWQGT 1006
W T
Sbjct: 1151 PADWMCT 1157
Score = 55.2 bits (127), Expect = 2e-07
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 8/210 (3%)
Query: 348 WQKVKDDLELEDHKMIPKGTPIDI-EGISQSHIGDFLSVLEFVHLYSNILKSKDFLHGAL 406
+ K ++DL D K +P+ ++I E IS + D+L + +F + + +L K+ + G+
Sbjct: 443 YNKKREDLICNDLKPLPRFPKLEIPEWISNAEFEDYLFIFQFFNSFKQLLPLKE-IRGSD 501
Query: 407 DIETLRKALTMK---EHSGVFCDIIQMFL---TTIFGLQEDEAEDYNENGGIHLSNEDKE 460
+++ + +K + F D++++ L T I ++ + D N ++L N
Sbjct: 502 EVQFSDIIIAIKCNDPQNSSFADLLRVLLSIRTDIADEEDGDEADINNREEVYLINAQNC 561
Query: 461 AFPDVGVAKAVELATKASKWSQTYLGTPLSKLPMDALTVSEILRLHLLXXXXXXXXXXXX 520
V ++ + + G + LP+D +T++E+LRL
Sbjct: 562 DPAHVTHGDSIRDLSDLHFKIRKIHGKSVRHLPVDWMTLTEVLRLIFETSGYYTGMATHR 621
Query: 521 XXXXQRGGYSSLDDPGLRLRRRAPQLLVRL 550
RG + +DP R R P ++ +L
Sbjct: 622 HRLYARGNFRGYEDPAYEFRTRHPGIMEKL 651
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.027
Identities = 13/21 (61%), Positives = 17/21 (80%)
Query: 976 MLLCDACNAGHHLYCLTPPLQ 996
+L CD C+ G+HLYCLTP L+
Sbjct: 326 LLFCDDCDRGYHLYCLTPALE 346
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 36.3 bits (80), Expect = 0.11
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQESMDKFLXXXXXXXXXXP 297
+F ++ L+S AA Q A A N + + ++ ++
Sbjct: 595 QFAQAQADLRSAAAQAAQAAQAQAQMTNMRAQAEAVARQQAMMKQEQARAQAAAKEAARL 654
Query: 298 KMPVDPAAKKSAQELAEKMRRAEDQMRQR-XXXXXXXXXXXNARLQAYLKEWQKVKDDLE 356
K + AAK Q AE R+AE +MR R A+ QA+ + + + +E
Sbjct: 655 KAETE-AAKAKVQAEAEARRKAEQEMRVRQAQAAQTQAAQAQAQSQAHAQNQAQTQAIVE 713
Query: 357 LEDHKMIPKGTPIDIEGISQ 376
++ +MI G P+ ++ + Q
Sbjct: 714 IQ--RMIQSGQPLSMQQMQQ 731
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 36.3 bits (80), Expect = 0.11
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 4/140 (2%)
Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQESMDKFLXXXXXXXXXXP 297
+F ++ L+S AA Q A A N + + ++ ++
Sbjct: 1974 QFAQAQADLRSAAAQAAQAAQAQAQMTNMRAQAEAVARQQAMMKQEQARAQAAAKEAARL 2033
Query: 298 KMPVDPAAKKSAQELAEKMRRAEDQMRQR-XXXXXXXXXXXNARLQAYLKEWQKVKDDLE 356
K + AAK Q AE R+AE +MR R A+ QA+ + + + +E
Sbjct: 2034 KAETE-AAKAKVQAEAEARRKAEQEMRVRQAQAAQTQAAQAQAQSQAHAQNQAQTQAIVE 2092
Query: 357 LEDHKMIPKGTPIDIEGISQ 376
++ +MI G P+ ++ + Q
Sbjct: 2093 IQ--RMIQSGQPLSMQQMQQ 2110
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 36.3 bits (80), Expect = 0.11
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKP-SPDKKGRQE 280
E +S K KSP KV+ KPAS TK KS +KP SP KK E
Sbjct: 1556 EIKSPVKKEKSPE--KVEEKPASPTKKEKSPEKPASPTKKSENE 1597
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 36.3 bits (80), Expect = 0.11
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKP-SPDKKGRQE 280
E +S K KSP KV+ KPAS TK KS +KP SP KK E
Sbjct: 1556 EIKSPVKKEKSPE--KVEEKPASPTKKEKSPEKPASPTKKSENE 1597
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 36.3 bits (80), Expect = 0.11
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKP-SPDKKGRQE 280
E +S K KSP KV+ KPAS TK KS +KP SP KK E
Sbjct: 1556 EIKSPVKKEKSPE--KVEEKPASPTKKEKSPEKPASPTKKSENE 1597
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 36.3 bits (80), Expect = 0.11
Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKP-SPDKKGRQE 280
E +S K KSP KV+ KPAS TK KS +KP SP KK E
Sbjct: 1556 EIKSPVKKEKSPE--KVEEKPASPTKKEKSPEKPASPTKKSENE 1597
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 35.9 bits (79), Expect = 0.15
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 976 MLLCDACNAGHHLYCLTPPL-QVQAVEKW 1003
+LLCD+C H YC+ PPL +V E W
Sbjct: 329 LLLCDSCVCSFHAYCIDPPLTEVPKEETW 357
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 35.9 bits (79), Expect = 0.15
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 976 MLLCDACNAGHHLYCLTPPL-QVQAVEKW 1003
+LLCD+C H YC+ PPL +V E W
Sbjct: 329 LLLCDSCVCSFHAYCIDPPLTEVPKEETW 357
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 35.1 bits (77), Expect = 0.25
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 976 MLLCDACNAGHHLYCLTPPLQVQAVEKW 1003
+LLCD C + +H YC+ PPL +W
Sbjct: 340 ILLCDTCPSSYHAYCIDPPLTEIPEGEW 367
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical protein
T14G8.1 protein.
Length = 1787
Score = 35.1 bits (77), Expect = 0.25
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 976 MLLCDACNAGHHLYCLTPPLQVQAVEKW 1003
+LLCD C + +H YC+ PPL +W
Sbjct: 340 ILLCDTCPSSYHAYCIDPPLTEIPEGEW 367
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 35.1 bits (77), Expect = 0.25
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 976 MLLCDACNAGHHLYCLTPPLQVQAVEKW 1003
+LLCD C + +H YC+ PPL +W
Sbjct: 340 ILLCDTCPSSYHAYCIDPPLTEIPEGEW 367
>Z79603-3|CAB01892.1| 208|Caenorhabditis elegans Hypothetical
protein M163.3 protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.59
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 18/194 (9%)
Query: 132 TEAHILSVTAQKQHPDSKAILSAASYVYEVEQYTDATPSTMGQIGTAPFDRVRRRKGIYS 191
+++ +++ + + P +KA +A + A P + I A +++ RKG S
Sbjct: 2 SDSAVVAAAVEPKVPKAKAAKAAKPTKVAKAKAPVAHPPYINMIKEA-IKQLKDRKGA-S 59
Query: 192 RDKNRLFLKQFVEHGPGGVICIK---KSALNEYNISKVSFSQIFTGNPPEFESSKKLL-- 246
+ F+ Q + G VI I + AL SK +G F +K
Sbjct: 60 KQAILKFISQNYKLGDN-VIQINAHLRQALKRGVTSKALVQAAGSGANGRFRVPEKAAAA 118
Query: 247 KSPAATK---VQHKPASATKLN--KSLKKPSPDKKGRQESMDKFLXXXXXXXXXXPKMPV 301
K PAA K KPA+A K K KKP+ K + + DK + PK
Sbjct: 119 KKPAAAKKPAAAKKPAAAKKATGEKKAKKPAAAKPKKAATGDKKVKKAKS-----PKKVA 173
Query: 302 DPAAKKSAQELAEK 315
PAAKK A+ A+K
Sbjct: 174 KPAAKKVAKSPAKK 187
>AF017810-1|AAB70665.1| 208|Caenorhabditis elegans histone H1.1
protein.
Length = 208
Score = 33.9 bits (74), Expect = 0.59
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 18/194 (9%)
Query: 132 TEAHILSVTAQKQHPDSKAILSAASYVYEVEQYTDATPSTMGQIGTAPFDRVRRRKGIYS 191
+++ +++ + + P +KA +A + A P + I A +++ RKG S
Sbjct: 2 SDSAVVAAAVEPKVPKAKAAKAAKPTKVAKAKAPVAHPPYINMIKEA-IKQLKDRKGA-S 59
Query: 192 RDKNRLFLKQFVEHGPGGVICIK---KSALNEYNISKVSFSQIFTGNPPEFESSKKLL-- 246
+ F+ Q + G VI I + AL SK +G F +K
Sbjct: 60 KQAILKFISQNYKLGDN-VIQINAHLRQALKRGVTSKALVQAAGSGANGRFRVPEKAAAA 118
Query: 247 KSPAATK---VQHKPASATKLN--KSLKKPSPDKKGRQESMDKFLXXXXXXXXXXPKMPV 301
K PAA K KPA+A K K KKP+ K + + DK + PK
Sbjct: 119 KKPAAAKKPAAAKKPAAAKKATGEKKAKKPAAAKPKKAATGDKKVKKAKS-----PKKVA 173
Query: 302 DPAAKKSAQELAEK 315
PAAKK A+ A+K
Sbjct: 174 KPAAKKVAKSPAKK 187
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 33.5 bits (73), Expect = 0.78
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 972 DPHAMLLCDACNAGHHLYCLTPPLQVQAVEKWQ 1004
D +LLCD C+ +H+YC+ P L W+
Sbjct: 574 DEANLLLCDECDVSYHIYCMKPLLDKIPQGPWR 606
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 33.5 bits (73), Expect = 0.78
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 972 DPHAMLLCDACNAGHHLYCLTPPLQVQAVEKWQ 1004
D +LLCD C+ +H+YC+ P L W+
Sbjct: 574 DEANLLLCDECDVSYHIYCMKPLLDKIPQGPWR 606
>X53277-1|CAA37372.1| 208|Caenorhabditis elegans histone H1
protein.
Length = 208
Score = 32.7 bits (71), Expect = 1.4
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 236 PPEFESSKK--LLKSPAATKVQHKPASATKLN--KSLKKPSPDKKGRQESMDKFLXXXXX 291
P + ++KK K PAA K KPA+A K K KKP+ K + + DK +
Sbjct: 112 PEKAAAAKKPAAAKKPAAAK---KPAAAKKATGEKKAKKPAAAKPKKAATGDKKVKKAKS 168
Query: 292 XXXXXPKMPVDPAAKKSAQELAEK 315
PK PAAKK A+ A+K
Sbjct: 169 -----PKKVAKPAAKKVAKSPAKK 187
>AL132895-2|CAC14404.1| 613|Caenorhabditis elegans Hypothetical
protein Y59A8A.2 protein.
Length = 613
Score = 31.9 bits (69), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 972 DPHAMLLCDACNAGHHLYCLTPPL 995
+ H CD C+ +H+ CL+PPL
Sbjct: 537 EQHKQTQCDECHKSYHIGCLSPPL 560
>Z79604-4|CAB60456.1| 598|Caenorhabditis elegans Hypothetical
protein ZK662.5 protein.
Length = 598
Score = 31.5 bits (68), Expect = 3.1
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 189 IYSRDKNRLFLKQFV--EHGPGGVICIKKSALNEYNISKVSFSQIFTGN 235
+Y R K+ ++L++ V P ++C+ + A+N Y+ S V FS + N
Sbjct: 159 LYER-KSAIYLRKLVFGTINPENILCMLRRAVNSYSFSNVRFSNLVCSN 206
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein
ZK593.4 protein.
Length = 1477
Score = 31.5 bits (68), Expect = 3.1
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 972 DPHAMLLCD--ACNAGHHLYCLTPPLQVQAVEKWQ 1004
D +LLCD CN G H YC P L +W+
Sbjct: 330 DEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWR 364
>Z67755-8|CAA91755.2| 322|Caenorhabditis elegans Hypothetical
protein F54F7.2 protein.
Length = 322
Score = 31.5 bits (68), Expect = 3.1
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 848 TELESIPVNKYRDPGYYLEAARVN-GVKVEGD-ELKARRDVIRGLACALLQVSQAIHAKY 905
T +S+PVN D G +EAA +N V+VE + E ++ G C L + + +
Sbjct: 162 TSGDSVPVNVSSDIGLVIEAAFMNPSVRVEIEVEYSTPYTMVIG-KCGLTMLRLEGNGEL 220
Query: 906 LKRPLGWDE 914
K GWDE
Sbjct: 221 KKHNFGWDE 229
>U06933-1|AAA64938.1| 551|Caenorhabditis elegans CeSWAP protein.
Length = 551
Score = 31.5 bits (68), Expect = 3.1
Identities = 21/65 (32%), Positives = 27/65 (41%)
Query: 215 KSALNEYNISKVSFSQIFTGNPPEFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPD 274
KS Y KVSF Q P E S +L SPA P ++ ++ +L P P
Sbjct: 424 KSPYYSYYHHKVSFYQWRMYQPIEQNLSPLVLNSPAPPSAVSSPGPSSLMSLNLSTPEPP 483
Query: 275 KKGRQ 279
RQ
Sbjct: 484 LNRRQ 488
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 356 ELEDHKMIPKG---TPIDIEGISQSHIGDFLSVLEFVHLYSNILKSKDFLHGALDIETLR 412
EL + ++P G +P +G + IGD L V FV++ ++ SKD D+ +
Sbjct: 1143 ELFEWNVLPFGLVISPALFQGTMEEIIGDLLGVCAFVYVDDLLIASKDMEQHLQDV---K 1199
Query: 413 KALTMKEHSGV 423
+ALT SG+
Sbjct: 1200 EALTRIRKSGM 1210
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans Hypothetical
protein F44E2.2a protein.
Length = 2175
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 356 ELEDHKMIPKG---TPIDIEGISQSHIGDFLSVLEFVHLYSNILKSKDFLHGALDIETLR 412
EL + ++P G +P +G + IGD L V FV++ ++ SKD D+ +
Sbjct: 1046 ELFEWNVLPFGLVISPALFQGTMEEIIGDLLGVCAFVYVDDLLIASKDMEQHLQDV---K 1102
Query: 413 KALTMKEHSGV 423
+ALT SG+
Sbjct: 1103 EALTRIRKSGM 1113
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans Hypothetical
protein F44E2.2b protein.
Length = 2186
Score = 31.1 bits (67), Expect = 4.1
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 356 ELEDHKMIPKG---TPIDIEGISQSHIGDFLSVLEFVHLYSNILKSKDFLHGALDIETLR 412
EL + ++P G +P +G + IGD L V FV++ ++ SKD D+ +
Sbjct: 1057 ELFEWNVLPFGLVISPALFQGTMEEIIGDLLGVCAFVYVDDLLIASKDMEQHLQDV---K 1113
Query: 413 KALTMKEHSGV 423
+ALT SG+
Sbjct: 1114 EALTRIRKSGM 1124
>Z73424-3|CAA97781.2| 1150|Caenorhabditis elegans Hypothetical protein
C44B9.4 protein.
Length = 1150
Score = 30.7 bits (66), Expect = 5.5
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 976 MLLCDACNAGHHLYCLTPPL-QVQAVEKWQGTPGWNETPFD 1015
ML CD C+ H C+TPPL V+A W P ET D
Sbjct: 233 MLKCDFCDLIWHQKCVTPPLIHVRAYFYWM-CPRHPETVID 272
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 30.3 bits (65), Expect = 7.2
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 199 LKQFVEHGPGGVICIKKSALNEYNISKVSFSQIFTGNPPEFESSKKLLKSPAATKVQHKP 258
L + E+G I KK + + K + +I E KK ++K
Sbjct: 494 LSKSTEYGARESIEEKKKIVELEELLKETEKRIKESEHRRREDQKKF--EAMRLHYKNKY 551
Query: 259 ASATKLNKSLKKPSPDKKGRQESMDKFLXXXXXXXXXXPKMPVDPAAKKSAQELAEKMRR 318
+A K K L + + K +E +++ P M +P K+ +Q +MRR
Sbjct: 552 DAAKKTEKKLSVVAKNSKVEEERIEE-----EKISHSPPPMTFEPIRKRHSQSEISRMRR 606
Query: 319 AEDQMRQR 326
A+D + Q+
Sbjct: 607 ADDDLLQK 614
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 30.3 bits (65), Expect = 7.2
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 199 LKQFVEHGPGGVICIKKSALNEYNISKVSFSQIFTGNPPEFESSKKLLKSPAATKVQHKP 258
L + E+G I KK + + K + +I E KK ++K
Sbjct: 494 LSKSTEYGARESIEEKKKIVELEELLKETEKRIKESEHRRREDQKKF--EAMRLHYKNKY 551
Query: 259 ASATKLNKSLKKPSPDKKGRQESMDKFLXXXXXXXXXXPKMPVDPAAKKSAQELAEKMRR 318
+A K K L + + K +E +++ P M +P K+ +Q +MRR
Sbjct: 552 DAAKKTEKKLSVVAKNSKVEEERIEE-----EKISHSPPPMTFEPIRKRHSQSEISRMRR 606
Query: 319 AEDQMRQR 326
A+D + Q+
Sbjct: 607 ADDDLLQK 614
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 30.3 bits (65), Expect = 7.2
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 189 IYSRDKNRLFLKQFVEHGPGG--VIC----IKKSALNEYNISKVSFSQIFTGN 235
++++ K + F ++F + GP V C + K +EY IS+ FS+++ GN
Sbjct: 47 VFNKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYISRTEFSKLYAGN 99
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 29.9 bits (64), Expect = 9.6
Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Query: 129 DHWTEAHILSVTAQKQHPDSKAILSAASYVYEVEQYTDATPSTMGQIGTAPFDRVRRRKG 188
D W I+ + Q P+ S V+ M + TAPFDR++
Sbjct: 214 DFWRHNLIIDIGEDGQVPEDFTPQELLSGVWWRHLVAGGVAGAMSRTCTAPFDRIKVYLQ 273
Query: 189 IYSRDKNRLFLKQFVE--HGPGGVICIKKSALNEYNISKVS 227
+ S N+L + V H GG+ + N N+ K++
Sbjct: 274 VNSTKTNKLGVVSCVHLLHAEGGIKSFWRG--NGINVIKIA 312
>Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical
protein K01C8.1 protein.
Length = 499
Score = 29.9 bits (64), Expect = 9.6
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 772 QSLELDKDNIIQYLRKCPVKYLNGSAASDREAWRGTIMLRGYDKQAD 818
+S+ + KD +++ ++ +KY+NG A D A +GTI L D+ D
Sbjct: 219 ESIAVAKDFALRHAKENHLKYINGYDAIDILAGQGTIGLEILDQVPD 265
>AF077536-3|AAK31409.1| 726|Caenorhabditis elegans Hypothetical
protein C16A11.3 protein.
Length = 726
Score = 29.9 bits (64), Expect = 9.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 677 ETEKERASSDKENDSAANSRGNSPKKPLTNING 709
E +K R S+ +N++ A +R N PK P+ +G
Sbjct: 355 EIKKIRRKSETDNENVAGNRENLPKNPILTSSG 387
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.133 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,963,929
Number of Sequences: 27539
Number of extensions: 939869
Number of successful extensions: 2703
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2625
Number of HSP's gapped (non-prelim): 86
length of query: 1015
length of database: 12,573,161
effective HSP length: 89
effective length of query: 926
effective length of database: 10,122,190
effective search space: 9373147940
effective search space used: 9373147940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)
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