SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000814-TA|BGIBMGA000814-PA|IPR011011|Zinc finger,
FYVE/PHD-type, IPR013136|WSTF/Acf1/Cbp146, IPR004022|DDT,
IPR001965|Zinc finger, PHD-type
         (1015 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    26   1.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    25   2.3  
AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex det...    25   4.1  
AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex det...    25   4.1  
AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex det...    25   4.1  
AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex det...    25   4.1  
AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex det...    25   4.1  
AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex det...    25   4.1  
AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex det...    25   4.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    25   4.1  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    24   5.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   7.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   7.2  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    24   7.2  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   9.5  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   9.5  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 108 VFNFVRDRYFVGETIEACLEGDHWT 132
           +F   +DR ++   +EACL G+ WT
Sbjct: 431 LFKTFKDRKYLYMLMEACLGGELWT 455


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 809 MLRGYDKQADYLTWGPNQMYRDDYHQPNGVLNIPQDL 845
           M R YD Q D + +  NQ Y  D +   G+    +DL
Sbjct: 423 MARKYDVQTDSIIFANNQPYTKDSYTVAGMGETIEDL 459


>AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQES 281
           E E   + LK     + + + A   KL+K  K  SP+ +GR  +
Sbjct: 47  EREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSNA 90


>AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQES 281
           E E   + LK     + + + A   KL+K  K  SP+ +GR  +
Sbjct: 47  EREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSNA 90


>AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQES 281
           E E   + LK     + + + A   KL+K  K  SP+ +GR  +
Sbjct: 47  EREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSNA 90


>AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQES 281
           E E   + LK     + + + A   KL+K  K  SP+ +GR  +
Sbjct: 47  EREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSNA 90


>AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQES 281
           E E   + LK     + + + A   KL+K  K  SP+ +GR  +
Sbjct: 47  EREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSNA 90


>AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQES 281
           E E   + LK     + + + A   KL+K  K  SP+ +GR  +
Sbjct: 47  EREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSNA 90


>AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQES 281
           E E   + LK     + + + A   KL+K  K  SP+ +GR  +
Sbjct: 47  EREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSNA 90


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 238 EFESSKKLLKSPAATKVQHKPASATKLNKSLKKPSPDKKGRQES 281
           E E   + LK     + + + A   KL+K  K  SP+ +GR  +
Sbjct: 47  EREREHERLKKKMILEYELRRAREKKLSKRSKSRSPESRGRSNA 90


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 652 PCRDKPLPSAPEHGED 667
           PC ++PLPS P  G D
Sbjct: 469 PCFEEPLPSLPLPGAD 484


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 28  EITDEIFKDYEEYCERIILVNSMVWTCEMTGKNNLTYSEALASEKAARNQLK 79
           EIT  I    +E    ++L N+ V+  + T  NN   +E  A+ KAA ++++
Sbjct: 354 EITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSATVKAAISEVQ 405


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 28  EITDEIFKDYEEYCERIILVNSMVWTCEMTGKNNLTYSEALASEKAARNQLK 79
           EIT  I    +E    ++L N+ V+  + T  NN   +E  A+ KAA ++++
Sbjct: 392 EITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSATVKAAISEVQ 443


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 832 YHQPNGVLNIPQDLDETELESIPVNKYRDPG 862
           +H P   +++ Q L +    SI +++Y +PG
Sbjct: 156 WHSPEAHISVAQKLQKEIPNSIILDQYTNPG 186


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 713 RNGFDDITQQLLICSGDLSTCKVHG 737
           ++ +D+I +    CSGD+S  K  G
Sbjct: 47  KDEYDEIGRLKRTCSGDISVTKCEG 71


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 713 RNGFDDITQQLLICSGDLSTCKVHG 737
           ++ +D+I +    CSGD+S  K  G
Sbjct: 47  KDEYDEIGRLKRTCSGDISVTKCEG 71


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.133    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 261,056
Number of Sequences: 429
Number of extensions: 10939
Number of successful extensions: 36
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 18
length of query: 1015
length of database: 140,377
effective HSP length: 65
effective length of query: 950
effective length of database: 112,492
effective search space: 106867400
effective search space used: 106867400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)

- SilkBase 1999-2023 -