GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000812-TA|BGIBMGA000812-PA|IPR001478|PDZ/DHR/GLGF
         (657 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    36   0.004
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    26   3.6  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 35.5 bits (78), Expect = 0.004
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 576 NGTVIVVRSLVPGGVAEKNGEISPGDRVMSVNGVSIQNATLDQAVQALKGAPRGTVKVGI 635
           +G  IV R ++ GG+  +   +  GD +  +NG  +Q+ T+ Q  + L+ A RG+V   I
Sbjct: 496 DGRCIVAR-IMHGGMIHRQATLHVGDEIREINGQPVQHQTVSQLQRLLRDA-RGSVTFKI 553

Query: 636 A---RPLPP 641
               R  PP
Sbjct: 554 VPSYRSAPP 562



 Score = 27.1 bits (57), Expect = 1.6
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 417 IRSVLPDGPVGLQGVLNAGDELLEVNEYRLHGLTHSEVVNILKQLPDRVRLVCARNSIDS 476
           +  ++  G +  Q  L+ GDE+ E+N   +   T S++  +L+     V       S  S
Sbjct: 501 VARIMHGGMIHRQATLHVGDEIREINGQPVQHQTVSQLQRLLRDARGSVTFKIV-PSYRS 559

Query: 477 GPRPV 481
            P PV
Sbjct: 560 APPPV 564



 Score = 25.4 bits (53), Expect = 4.8
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 17  NDGNGLGFNLVGGRSTGVVIKYVLPGGVADKDRRLQSGDHVLQVGSVNLRGFTSEQVAAV 76
           N    +G  L        ++  ++ GG+  +   L  GD + ++    ++  T  Q+  +
Sbjct: 482 NTDEPMGITLKMTEDGRCIVARIMHGGMIHRQATLHVGDEIREINGQPVQHQTVSQLQRL 541

Query: 77  LRQA 80
           LR A
Sbjct: 542 LRDA 545


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.8 bits (54), Expect = 3.6
 Identities = 14/68 (20%), Positives = 33/68 (48%)

Query: 316 VPSQLENSITEIEPEPESNTTIDSSVLEVGDLQEPTQEELDQRFDEILAVDKEDIVKKWK 375
           VPS L+  + E++   +    +D +   +    +   E+  +   E  + D+E + ++ +
Sbjct: 26  VPSDLQQQLDELQLADKPEAPVDDAEQPLPPNGDELPEDAPEPVPEDGSPDEEHLEEEQE 85

Query: 376 EEIGSDKE 383
           EE  +D+E
Sbjct: 86  EEAEADEE 93


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.133    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,195
Number of Sequences: 2123
Number of extensions: 26617
Number of successful extensions: 44
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40
Number of HSP's gapped (non-prelim): 4
length of query: 657
length of database: 516,269
effective HSP length: 68
effective length of query: 589
effective length of database: 371,905
effective search space: 219052045
effective search space used: 219052045
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)