GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000811-TA|BGIBMGA000811-PA|undefined
         (59 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    20   7.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          20   10.0 

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 5/22 (22%), Positives = 13/22 (59%)

Query: 2   PPTPEAIDDHNHSVKSYTDKAE 23
           PP+PE + +H  + +  + + +
Sbjct: 222 PPSPEQLQNHQQTAQQSSQQQQ 243


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 2   PPTPEAIDDHNHSVKSYTDKAE 23
           P  P  +D H  ++KS   KAE
Sbjct: 159 PLLPMILDQHYINLKSQVIKAE 180


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,739
Number of Sequences: 2123
Number of extensions: 1806
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 59
length of database: 516,269
effective HSP length: 38
effective length of query: 21
effective length of database: 435,595
effective search space:  9147495
effective search space used:  9147495
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)