GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000811-TA|BGIBMGA000811-PA|undefined
         (59 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024401-1|ABC86463.1|  357|Drosophila melanogaster IP04909p pro...    26   7.2  
AE014297-593|AAF54032.3|  946|Drosophila melanogaster CG32466-PA...    26   7.2  
BT022161-1|AAY51555.1|  542|Drosophila melanogaster IP01358p pro...    25   9.5  
AY051430-1|AAK92854.1|  724|Drosophila melanogaster GH10595p pro...    25   9.5  
AF395905-1|AAL59599.1|  943|Drosophila melanogaster rotund protein.    25   9.5  
AE013599-2121|AAF58100.2|  724|Drosophila melanogaster CG8256-PC...    25   9.5  
AE013599-2120|AAF58099.2|  724|Drosophila melanogaster CG8256-PB...    25   9.5  
AE013599-2119|AAG22263.1|  724|Drosophila melanogaster CG8256-PA...    25   9.5  

>BT024401-1|ABC86463.1|  357|Drosophila melanogaster IP04909p
           protein.
          Length = 357

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 3   PTPEAIDDHN--HSVKSYTDKAEAVGRVSSVTLLTCPISHV 41
           PTP ++ DHN  H++ S +  A      ++      PI  V
Sbjct: 255 PTPNSLSDHNPAHNLNSNSTAAAVAAAAAAAAAANMPIGGV 295


>AE014297-593|AAF54032.3|  946|Drosophila melanogaster CG32466-PA,
           isoform A protein.
          Length = 946

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 3   PTPEAIDDHN--HSVKSYTDKAEAVGRVSSVTLLTCPISHV 41
           PTP ++ DHN  H++ S +  A      ++      PI  V
Sbjct: 254 PTPNSLSDHNPAHNLNSNSTAAAVAAAAAAAAAANMPIGGV 294


>BT022161-1|AAY51555.1|  542|Drosophila melanogaster IP01358p
           protein.
          Length = 542

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)

Query: 3   PTPEAIDDHN--HSVKSYTDKAEAVG 26
           PTP ++ DHN  H++ S +  A A G
Sbjct: 254 PTPNSLSDHNPAHNLNSNSTAAAAAG 279


>AY051430-1|AAK92854.1|  724|Drosophila melanogaster GH10595p
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 13  HSVKSYTDKAEAVGRVSSVTLLTCPI 38
           H  KSY D+A AV +++S+T    PI
Sbjct: 491 HLAKSYGDRAFAVSKMASLTGKRWPI 516


>AF395905-1|AAL59599.1|  943|Drosophila melanogaster rotund protein.
          Length = 943

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 3   PTPEAIDDHN--HSVKSYTDKAEAVGRVSSVTLLTCPISHV 41
           PTP ++ DHN  H++ S    A AV   ++      PI  V
Sbjct: 252 PTPNSLSDHNPAHNLNS-NSTAAAVAAAAAAAAANMPIGGV 291


>AE013599-2121|AAF58100.2|  724|Drosophila melanogaster CG8256-PC,
           isoform C protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 13  HSVKSYTDKAEAVGRVSSVTLLTCPI 38
           H  KSY D+A AV +++S+T    PI
Sbjct: 491 HLAKSYGDRAFAVSKMASLTGKRWPI 516


>AE013599-2120|AAF58099.2|  724|Drosophila melanogaster CG8256-PB,
           isoform B protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 13  HSVKSYTDKAEAVGRVSSVTLLTCPI 38
           H  KSY D+A AV +++S+T    PI
Sbjct: 491 HLAKSYGDRAFAVSKMASLTGKRWPI 516


>AE013599-2119|AAG22263.1|  724|Drosophila melanogaster CG8256-PA,
           isoform A protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 13  HSVKSYTDKAEAVGRVSSVTLLTCPI 38
           H  KSY D+A AV +++S+T    PI
Sbjct: 491 HLAKSYGDRAFAVSKMASLTGKRWPI 516


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.131    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,281,971
Number of Sequences: 52641
Number of extensions: 89137
Number of successful extensions: 132
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 128
Number of HSP's gapped (non-prelim): 8
length of query: 59
length of database: 24,830,863
effective HSP length: 40
effective length of query: 19
effective length of database: 22,725,223
effective search space: 431779237
effective search space used: 431779237
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)