GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000810-TA|BGIBMGA000810-PA|undefined
         (65 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q80B00 Cluster: MC043L-like protein; n=5; Parapoxvirus|...    32   1.9  
UniRef50_Q6AIT0 Cluster: UPF0061 protein DP3021; n=4; Proteobact...    30   7.7  

>UniRef50_Q80B00 Cluster: MC043L-like protein; n=5;
          Parapoxvirus|Rep: MC043L-like protein - Orf virus
          Length = 797

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 7  LGSWALVTHDTLLAITQTYLSLINPVRASSQDVSCSLLKTQTDRFSKIYIFVITPNLS 64
          L  WA+   D  LA    +   IN   +   D +   L ++  +FS   I ++TP+L+
Sbjct: 21 LDIWAIEREDLTLAALMGFTGTINSNFSQRHDYNLHRLASELSKFSSSCILIVTPDLT 78


>UniRef50_Q6AIT0 Cluster: UPF0061 protein DP3021; n=4;
           Proteobacteria|Rep: UPF0061 protein DP3021 -
           Desulfotalea psychrophila
          Length = 482

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 8   GSWALVTHDTLLAITQTYLSLINPVRASSQDVSCSLLKTQTDRFSKIYIFVITPNLSL 65
           G+ + ++   +  + +  L LIN  R  + D    LL   TDRF+++YI ++   L L
Sbjct: 284 GNQSAISQWNMTRLAECLLPLINADRNRAIDQLNPLLIAYTDRFNRVYIKMMGKKLGL 341


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.320    0.129    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,548,889
Number of Sequences: 1657284
Number of extensions: 1526034
Number of successful extensions: 3426
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3424
Number of HSP's gapped (non-prelim): 2
length of query: 65
length of database: 575,637,011
effective HSP length: 45
effective length of query: 20
effective length of database: 501,059,231
effective search space: 10021184620
effective search space used: 10021184620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)