GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000810-TA|BGIBMGA000810-PA|undefined
         (65 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ431010-1|ABD85475.1|  470|Drosophila melanogaster male germlin...    25   9.9  
AE014134-2953|AAN11009.1|  838|Drosophila melanogaster CG31791-P...    25   9.9  

>DQ431010-1|ABD85475.1|  470|Drosophila melanogaster male germline
           specific protein protein.
          Length = 470

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 7   LGSWALVTHDTLLAITQTYLSLINPVRASSQDVSC 41
           L SW++      LAI Q YL +I+  R S++D+ C
Sbjct: 162 LFSWSMDDFLMRLAIKQVYLDVIHRER-SAEDLDC 195


>AE014134-2953|AAN11009.1|  838|Drosophila melanogaster CG31791-PA
           protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 7   LGSWALVTHDTLLAITQTYLSLINPVRASSQDVSC 41
           L SW++      LAI Q YL +I+  R S++D+ C
Sbjct: 162 LFSWSMDDFLMRLAIKQVYLDVIHRER-SAEDLDC 195


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.129    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,561,758
Number of Sequences: 52641
Number of extensions: 63991
Number of successful extensions: 130
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 130
Number of HSP's gapped (non-prelim): 2
length of query: 65
length of database: 24,830,863
effective HSP length: 45
effective length of query: 20
effective length of database: 22,462,018
effective search space: 449240360
effective search space used: 449240360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)