BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000809-TA|BGIBMGA000809-PA|undefined
(627 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative odorant-b... 29 0.37
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 27 2.0
AY146745-1|AAO12105.1| 153|Anopheles gambiae odorant-binding pr... 25 8.0
AJ697725-1|CAG26918.1| 153|Anopheles gambiae putative odorant-b... 25 8.0
AF437886-1|AAL84181.1| 153|Anopheles gambiae odorant binding pr... 25 8.0
>AJ697721-1|CAG26914.1| 135|Anopheles gambiae putative
odorant-binding protein OBPjj11 protein.
Length = 135
Score = 29.1 bits (62), Expect = 0.37
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 39 EGAVDRLVNLYKKCVYKTKGWITDSGDVELDRV-QVIMTELGHVE-DEIFKRRHQNE 93
EGA DR + +C ++ G++ G V+ D + Q + +E G + DE+ R N+
Sbjct: 56 EGA-DRNTRCFVQCFFQGAGFVDQDGSVQTDELTQKLASEYGQEKADELVARCRNND 111
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 26.6 bits (56), Expect = 2.0
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 441 QAEIQRNI---RGHDRLYVSTGNQSYEYILGLYEEAQQDLRKLIEDKQKYPYQSEGVRGN 497
Q + +RN+ R RL V ++S + + +E R LI ++ P SE
Sbjct: 1049 QKKYKRNLDELRQATRLRVDAKSKSLDSCSDILQEVPNLNRDLINLFRQMPKVSELSENE 1108
Query: 498 VMLSADNVLIGGQLPSPVVGLAPVLGNRVVVVRF 531
S+ + L+GG P P+ + V+ + ++F
Sbjct: 1109 TEYSSSDQLMGGGKPGPLKEVNGVVTRKGAPMKF 1142
>AY146745-1|AAO12105.1| 153|Anopheles gambiae odorant-binding
protein AgamOBP3 protein.
Length = 153
Score = 24.6 bits (51), Expect = 8.0
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 27 DFLPHLPSLEIREGAVDRLVNLYKKCVYKTKGWITDSGDVELDRVQVIMTELGHV 81
D + EI E D + Y C++ G + D G+ ++Q + E H+
Sbjct: 63 DAIKRFSDQEIHE---DDKLKCYMNCLFHQAGVVNDKGEFHYVKIQDFLPESMHL 114
>AJ697725-1|CAG26918.1| 153|Anopheles gambiae putative
odorant-binding protein OBPjj15 protein.
Length = 153
Score = 24.6 bits (51), Expect = 8.0
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 27 DFLPHLPSLEIREGAVDRLVNLYKKCVYKTKGWITDSGDVELDRVQVIMTELGHV 81
D + EI E D + Y C++ G + D G+ ++Q + E H+
Sbjct: 63 DAIKRFSDQEIHE---DDKLKCYMNCLFHQAGVVNDKGEFHYVKIQDFLPESMHL 114
>AF437886-1|AAL84181.1| 153|Anopheles gambiae odorant binding
protein protein.
Length = 153
Score = 24.6 bits (51), Expect = 8.0
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 27 DFLPHLPSLEIREGAVDRLVNLYKKCVYKTKGWITDSGDVELDRVQVIMTELGHV 81
D + EI E D + Y C++ G + D G+ ++Q + E H+
Sbjct: 63 DAIKRFSDQEIHE---DDKLKCYMNCLFHQAGVVNDKGEFHYVKIQDFLPESMHL 114
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.323 0.140 0.451
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,864
Number of Sequences: 2123
Number of extensions: 26238
Number of successful extensions: 128
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 127
Number of HSP's gapped (non-prelim): 5
length of query: 627
length of database: 516,269
effective HSP length: 68
effective length of query: 559
effective length of database: 371,905
effective search space: 207894895
effective search space used: 207894895
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
- SilkBase 1999-2023 -