GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000809-TA|BGIBMGA000809-PA|undefined
         (627 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   6.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   6.3  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 434 PYYKELTQAEIQRNIRGHDRLYVSTGN 460
           P YKELT  ++  NI     L++S  N
Sbjct: 125 PVYKELTDIKLVLNILSDVTLWLSNVN 151


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 434 PYYKELTQAEIQRNIRGHDRLYVSTGN 460
           P YKELT  ++  NI     L++S  N
Sbjct: 51  PVYKELTDIKLVLNILSDVTLWLSNVN 77


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.140    0.451 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,231
Number of Sequences: 317
Number of extensions: 5949
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 2
length of query: 627
length of database: 114,650
effective HSP length: 61
effective length of query: 566
effective length of database: 95,313
effective search space: 53947158
effective search space used: 53947158
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)