Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000809-TA|BGIBMGA000809-PA|undefined
(627 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0284 + 32836171-32836377,32836466-32836568,32836681-328367... 164 2e-40
01_06_1507 - 37838645-37839311,37839393-37839499,37839588-378396... 161 2e-39
02_03_0236 + 16717320-16717496,16718082-16718240,16719410-167194... 78 2e-14
04_04_1080 - 30674122-30674204,30674842-30674913,30675261-306753... 33 0.52
02_03_0238 + 16730444-16730448,16730484-16730586,16732043-167320... 33 0.91
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 32 1.2
09_04_0325 + 16689613-16689772,16690043-16690329 32 1.6
12_02_1084 - 25928373-25928426,25928551-25928652,25928913-259290... 31 2.8
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 30 6.4
08_01_0816 + 7935399-7936286,7936842-7936997,7937124-7937335,793... 30 6.4
03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,547... 30 6.4
11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510 29 8.4
07_03_1416 - 26415330-26417153 29 8.4
>03_06_0284 +
32836171-32836377,32836466-32836568,32836681-32836757,
32836846-32837037,32837144-32837263,32837350-32837412,
32837537-32837671,32837827-32837991,32838104-32838181,
32840303-32840389,32840548-32840619,32840925-32840951,
32842292-32842390,32843143-32843213,32843710-32843838,
32843936-32844012,32844186-32844226,32844319-32844393,
32844525-32844673,32844766-32844870,32844948-32845023,
32845465-32845541,32845761-32846529
Length = 997
Score = 164 bits (399), Expect = 2e-40
Identities = 109/303 (35%), Positives = 152/303 (50%), Gaps = 17/303 (5%)
Query: 326 GCASWKWYFPYHYAPFASDFVNICGLSTQFEKGTQPFRPLEQLMGVFPAASAQHVPRPWA 385
G SW+W++PYHYAPFASD + L F G QPF+P +QLMG PAAS+ +P+ +
Sbjct: 493 GVCSWQWFYPYHYAPFASDLKCLAELEITFFLG-QPFKPFDQLMGTLPAASSNALPKYYG 551
Query: 386 RLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDENRLFKALEPYYKELTQAEIQ 445
LM+DP SP+ FYP DF+ID+NGK+FAWQG+A LPF+DE RL + + LT E
Sbjct: 552 DLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERF 611
Query: 446 RNIRGHDRLYVSTGNQSYEYILGLYEEAQQDLRKLIEDKQKYPYQSEGVRGNVMLSADNV 505
RN D LYV + I LY+ Q P S G+ G + LS N
Sbjct: 612 RNRTMFDILYVRETHPLAAQIAFLYQMCSQSPNASYIIPID-PAASGGMNGFLCLSERN- 669
Query: 506 LIGGQLPSPVVGLAPVLGNRVVVVRFEDPQY-------PDEFVFPARRLQRATAPPRVLK 558
+ SPV G + NRV+ + +PQY P+ + PA+ L+ + P +
Sbjct: 670 CYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKILKPSDFKPFPIL 729
Query: 559 PGALDQREHRNWRPQIVRSTGMVRSNTVASLESAGRRMLGHHLPRERAYASVPPPHNPQR 618
+ R RPQ+ +G + + L A R++ + L + Y S P R
Sbjct: 730 WHEDNSRRQPRERPQV---SGALSGSV---LGEAAHRLVKNSLQIKSGY-SAGLLDMPYR 782
Query: 619 GKP 621
G P
Sbjct: 783 GAP 785
Score = 106 bits (254), Expect = 6e-23
Identities = 45/85 (52%), Positives = 66/85 (77%)
Query: 5 PFPYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKCVYKTKGWITDSG 64
PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++ L+N+Y++ G++TD G
Sbjct: 320 PFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGAINLLMNIYRREFTSMGGYLTDGG 379
Query: 65 DVELDRVQVIMTELGHVEDEIFKRR 89
+V LDRV+ + + E++IF++R
Sbjct: 380 EVLLDRVEHFIQSVAVHEEQIFQKR 404
>01_06_1507 -
37838645-37839311,37839393-37839499,37839588-37839663,
37839747-37839869,37840051-37840208,37840311-37840385,
37840466-37840506,37840594-37840670,37840755-37840883,
37840990-37841060,37841237-37841332,37841489-37841584,
37841681-37841953,37842871-37842957,37843101-37843178,
37843350-37843514,37843622-37843768,37843921-37843983,
37844082-37844201,37844352-37844543,37844672-37844748,
37845094-37845196,37845684-37845887
Length = 1074
Score = 161 bits (390), Expect = 2e-39
Identities = 95/257 (36%), Positives = 139/257 (54%), Gaps = 12/257 (4%)
Query: 326 GCASWKWYFPYHYAPFASDFVNICGLSTQFEKGTQPFRPLEQLMGVFPAASAQHVPRPWA 385
G SW+W++PYHYAPFASD + L+ FE G+ PF+P +QLMGVFPAAS+ +P +
Sbjct: 585 GVCSWQWFYPYHYAPFASDLSGLGQLNITFELGS-PFKPFDQLMGVFPAASSHALPVQYR 643
Query: 386 RLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDENRLFKALEPYYKELTQAEIQ 445
+LM+D SPIIDFYPTDF++D+NGK+++WQG+A LPF+DE RL ++ LT E +
Sbjct: 644 QLMTDANSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEAR 703
Query: 446 RNIRGHDRLYVSTGNQSYEYILGLYEE-AQQDLRKLIEDKQKYPYQSE-------GVRGN 497
RN + L+V+ + YI L + R+ E K+K S G+ G
Sbjct: 704 RNSIMFNMLFVNGSHPLSPYIYSLNSKFGHLPDRERNEIKEKIDPSSSCLVLCSGGMNGY 763
Query: 498 VMLSADNVLIGGQLPSPVVGLAPVLGNRVVVVRFEDPQYPDEFVFP--ARRLQRATAPPR 555
+ L + + SPV GL ++ N+V+ ++ P P + + T
Sbjct: 764 ISLCSGDP-CPPVFRSPVDGLEDIMDNQVICTIYKLPDSHKHIARPPVGVIIPKKTVEAT 822
Query: 556 VLKPGALDQREHRNWRP 572
LKP + E RP
Sbjct: 823 DLKPPPVLWHEDSGRRP 839
Score = 108 bits (260), Expect = 1e-23
Identities = 47/89 (52%), Positives = 68/89 (76%)
Query: 1 MPNLPFPYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKCVYKTKGWI 60
M N PFP DFER +DD++FMCFFVGNDFLPH+P+LEIREGA++ L+ +YKK G++
Sbjct: 319 MQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYL 378
Query: 61 TDSGDVELDRVQVIMTELGHVEDEIFKRR 89
TD+ +L++V+ + +G ED+IF++R
Sbjct: 379 TDACTPDLNKVEHFIQAVGSYEDKIFQKR 407
>02_03_0236 +
16717320-16717496,16718082-16718240,16719410-16719472,
16720041-16720205,16721140-16721217,16721318-16721428,
16721516-16721632,16721713-16721808,16722592-16722662,
16722780-16723011
Length = 422
Score = 78.2 bits (184), Expect = 2e-14
Identities = 35/93 (37%), Positives = 61/93 (65%), Gaps = 8/93 (8%)
Query: 9 DFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKCVYKTKGWITD------ 62
D ER +DD++F+CF +GNDF+PH+PSLE++E A+D L+ +YK K G+I +
Sbjct: 158 DIERLIDDFIFICFLMGNDFIPHIPSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEKVKD 217
Query: 63 --SGDVELDRVQVIMTELGHVEDEIFKRRHQNE 93
+ +E+ R+++ +L E++IF +R++ E
Sbjct: 218 KHAAYLEVSRLEIFFHQLSMYEEKIFLKRYELE 250
Score = 52.8 bits (121), Expect = 8e-07
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 329 SWKWYFPYHYAPFASDFVNICGLSTQFEKGTQPFRPLEQLMGVFPAASAQHVPRPWARLM 388
SW WY+P++ APF SD + C F +P RP +QLM V P +H P+ L
Sbjct: 343 SWSWYYPFYVAPFVSDLKSNCRFEISFTV-DKPLRPFDQLMAVLPL--RRHALSPFLLLY 399
Query: 389 SDPFSP 394
S P P
Sbjct: 400 SLPQYP 405
>04_04_1080 -
30674122-30674204,30674842-30674913,30675261-30675324,
30676358-30676394,30676562-30676675,30676791-30677002,
30677180-30677335,30677556-30678443
Length = 541
Score = 33.5 bits (73), Expect = 0.52
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 374 AASAQHVPRPWARLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDENRLFKALE 433
AA+ QH W + + +DFY +DF+ L A G + PFVDE+ + ++
Sbjct: 332 AANTQHHRFTWGLRSMEQHA--VDFYISDFQSGLRALVKAGYGARVTPFVDESVIID-ID 388
Query: 434 PYYKELTQAEIQRNIR 449
P K+++ E +R +R
Sbjct: 389 PDNKDMS-PEFRRWLR 403
>02_03_0238 +
16730444-16730448,16730484-16730586,16732043-16732099,
16732198-16732346,16732450-16732545,16732620-16732695,
16732810-16732883,16732991-16733408
Length = 325
Score = 32.7 bits (71), Expect = 0.91
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 397 DFYPTDFKIDLNGKKFAWQGVALLPFVDENRLFKALEPYYKELTQAEIQRNIRGHDRLYV 456
+F + D GK+F W+ ++ E L +A + KEL+ E++RN +++++
Sbjct: 18 EFDHPKLQADTIGKRFLWKCIS------EEELLQATKELDKELSMHEMRRNTPRQEKIFL 71
Query: 457 STGNQSYEYILGLYEEAQQDLRKLIEDKQKYPYQS--EGVRGNVMLSADNVLIGGQLPSP 514
N + + + + + Q +QK P S G+ G LS D L G SP
Sbjct: 72 QR-NSNAQALAKVIVQLQ---TSSCSPEQKLPIDSAISGLGG--WLSPDG-LSNGFFCSP 124
Query: 515 VVGLAPVLGNRVVVVRFEDPQ 535
+ L + ++ + F +P+
Sbjct: 125 LQNLQDITNDQAISAMFFNPE 145
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 32.3 bits (70), Expect = 1.2
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 561 ALDQREHRNWRPQIVRSTGMVRSNTVASLESAG-RRMLGHHLPRERAYASVPPPHNPQRG 619
A+ QR H +W P I + +L+ AG RR H ++ AS PP P RG
Sbjct: 72 AVQQRRH-HWAPVIHMQQFFPVGDVAYALQQAGWRRRAPPHHQQQGPGASPSPPPPPPRG 130
Query: 620 KP 621
+P
Sbjct: 131 RP 132
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 31.9 bits (69), Expect = 1.6
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 522 LGNR-VVVVRFEDPQYPDEFVFPARRLQRATA--PPRVLKPGALDQREHRNWRPQIVRST 578
LGN V R +D PD RR +R TA PP V++PG+ ++E + V T
Sbjct: 18 LGNHHVAAARHDDLLSPDAGHEGTRRSRRRTAKSPPDVIEPGSETRQEFQELIADSVAET 77
Query: 579 GMVR-SNTVASLESAGRR 595
G+ V++L+ + RR
Sbjct: 78 GVSDFFRFVSALDLSSRR 95
>12_02_1084 -
25928373-25928426,25928551-25928652,25928913-25929039,
25929292-25930730,25931430-25931447
Length = 579
Score = 31.1 bits (67), Expect = 2.8
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 432 LEPYYKELTQAEIQRNIRGHDRLYVSTGNQSYEYILGLYEEAQQDLRKLIEDKQKYPYQS 491
+E + K+L + R + + ++ NQ ++ L E ++ L + ED+QK Y++
Sbjct: 281 IESHIKDLLELSTLREVFDNYENHIDDANQEETFLRELLIEKEEQLSIMYEDRQKLKYEN 340
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 29.9 bits (64), Expect = 6.4
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 597 LGHHLPRERAYASVPPPHNPQRGKPL 622
+GHH R YAS+PP PQ G PL
Sbjct: 528 VGHHALRPEIYASIPPQAAPQ-GFPL 552
>08_01_0816 +
7935399-7936286,7936842-7936997,7937124-7937335,
7937473-7937665
Length = 482
Score = 29.9 bits (64), Expect = 6.4
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 374 AASAQHVPRPWARLMSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDENRLFKALE 433
AA+ +H W + + +DFY +DF+ L G + P+VDE+ + +
Sbjct: 332 AANTEHRQFTWGLRSMERHA--VDFYISDFQSGLRALVKTGYGARVTPYVDESVVID-IN 388
Query: 434 PYYKELTQAEI----QRNIRGHDRL 454
P K+++ + +RN+ DR+
Sbjct: 389 PDNKDMSPEFLRWLRERNLSSDDRI 413
>03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,
5478055-5478132,5478227-5478280,5478466-5478650,
5478781-5480374,5480506-5480700,5480753-5480904,
5481213-5481486,5481597-5481733,5482219-5482258,
5482773-5483261,5483605-5484168
Length = 1477
Score = 29.9 bits (64), Expect = 6.4
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 457 STGNQSYEYILGLYEEAQQDLRKLIEDKQKYPYQSEGVR--GNVMLSADNVLIGGQLPSP 514
+TGNQ Y+ L + + K K++ S G R G ++A +V+IG S
Sbjct: 1204 NTGNQDYDIADSLVDAGEHTTEKSTSSKKRTANSSGGSRGKGRRSMNAAHVIIGNGEDSD 1263
Query: 515 VVGLA 519
V LA
Sbjct: 1264 VSNLA 1268
>11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510
Length = 964
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 396 IDFYPTDFKIDLNGKKFAWQGVALLPFVDENRLFKALEPYYKELTQAEIQRNIRGHDRLY 455
+ YP D +I+ + W G + LF+ E Y+ EL + + I H L
Sbjct: 426 LSIYPEDHRIEKESLIWKWIGEGFVQEEQGKGLFEVGERYFTELINKSMIQPIEHHLYLG 485
Query: 456 VSTGNQSYEYILGL 469
G ++ +L L
Sbjct: 486 TVDGCHVHDMVLDL 499
>07_03_1416 - 26415330-26417153
Length = 607
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 545 RRLQRATAPPRVLKPGALDQREHRNWRPQIVRSTGMVRSNTVASLESAGRRMLGHHLPR 603
+R A A + + A+ R ++ RP ++ +TG++R+ ASL R+L LPR
Sbjct: 4 KRGAAAAATAALPEQQAVHARLEKSARPDVLYATGVMRAYLRASLPLQSLRLLAGLLPR 62
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.140 0.451
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,956,617
Number of Sequences: 37544
Number of extensions: 749114
Number of successful extensions: 1625
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1607
Number of HSP's gapped (non-prelim): 20
length of query: 627
length of database: 14,793,348
effective HSP length: 86
effective length of query: 541
effective length of database: 11,564,564
effective search space: 6256429124
effective search space used: 6256429124
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
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