Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000808-TA|BGIBMGA000808-PA|IPR004859|Putative 5-3
exonuclease
(322 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0284 + 32836171-32836377,32836466-32836568,32836681-328367... 373 e-103
01_06_1507 - 37838645-37839311,37839393-37839499,37839588-378396... 373 e-103
07_01_0920 + 7749937-7750264,7750416-7750546,7751686-7751747,775... 95 5e-20
02_03_0236 + 16717320-16717496,16718082-16718240,16719410-167194... 58 1e-08
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712... 32 0.54
03_05_0005 + 19470301-19471180,19471262-19471905,19472027-19472596 32 0.54
11_01_0648 + 5254272-5254468,5254491-5254845,5254945-5255292 31 1.2
05_07_0230 - 28540114-28540323,28540414-28540548,28540779-285409... 31 1.6
07_01_1018 - 8664851-8665495,8665525-8665935,8666374-8666580 30 2.2
11_02_0113 + 8453628-8453820,8453970-8454941,8455031-8455644 30 2.9
08_02_0174 + 13769487-13770352,13770357-13770408,13770438-137707... 30 2.9
06_03_0073 + 16229369-16230115,16230182-16230431,16230618-162307... 30 2.9
05_03_0577 + 15671570-15672432,15672571-15672785,15672825-156729... 30 2.9
11_04_0060 + 12984831-12985218,12985364-12985753,12986090-12986478 29 3.8
11_03_0131 + 10497674-10499617 29 3.8
09_02_0012 + 2965797-2966714,2966756-2967011,2967051-2967147,296... 29 3.8
08_02_0152 - 13304578-13305288 29 3.8
08_02_0147 - 13214179-13214889 29 3.8
08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150 29 3.8
05_03_0632 - 16404169-16405043,16405248-16405983,16406113-164065... 29 3.8
04_01_0299 - 3995709-3996185,3996209-3997075,3997142-3997252,399... 29 3.8
02_05_0521 - 29726985-29727605 29 3.8
12_02_0396 + 18577574-18578056,18578094-18578723 29 5.0
11_04_0182 - 14597325-14597881,14598082-14598243,14598416-14598950 29 5.0
11_04_0179 + 14562288-14562860,14562874-14563489,14563529-145636... 29 5.0
08_02_0349 - 16077063-16077824,16077891-16078102,16078142-160782... 29 5.0
07_03_1739 - 29148685-29149017,29149564-29149726,29149844-291500... 29 5.0
03_05_0013 - 19718178-19718930,19718997-19719205,19719245-197193... 29 5.0
02_02_0713 + 13209130-13209691,13209731-13209850,13209896-132103... 29 5.0
06_03_0017 - 15465831-15466043,15466091-15466249,15466664-154669... 29 6.6
05_03_0433 - 13972772-13973206 29 6.6
05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718 29 6.6
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 29 6.6
04_03_0274 + 13746294-13746323,13747339-13747639,13747692-13748092 29 6.6
02_03_0252 - 16882960-16884106,16884173-16884518,16892586-16892724 29 6.6
02_03_0034 - 14142518-14142923,14142935-14143269,14143976-141440... 29 6.6
10_04_0007 + 7439378-7439677,7439873-7440308,7440483-7440593,744... 28 8.8
04_03_0008 + 9296711-9298096 28 8.8
04_02_0034 - 8999618-9000358,9001439-9001618,9001666-9003621,900... 28 8.8
>03_06_0284 +
32836171-32836377,32836466-32836568,32836681-32836757,
32836846-32837037,32837144-32837263,32837350-32837412,
32837537-32837671,32837827-32837991,32838104-32838181,
32840303-32840389,32840548-32840619,32840925-32840951,
32842292-32842390,32843143-32843213,32843710-32843838,
32843936-32844012,32844186-32844226,32844319-32844393,
32844525-32844673,32844766-32844870,32844948-32845023,
32845465-32845541,32845761-32846529
Length = 997
Score = 373 bits (918), Expect = e-103
Identities = 181/318 (56%), Positives = 225/318 (70%), Gaps = 5/318 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVECVEQKPTDVD-GQLVYVDSSLPNPNGVEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + + VE++P +++ G V VD PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF ID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETQEKIEEVARIRNELQAKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYI 179
RA+K+ + E R+R E +A+G L + EA DSN ITPGTPFM LS L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTLVAKEKSEA-IDSNVITPGTPFMFVLSSALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIM 239
RLN+ PGW+ +KV+LSD+NVPGEGEHKIM YIR QR P DPNT+H L G DADLIM
Sbjct: 180 QLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEF-KPNKPRPCDVCGQLGHEMKECTGTNPDASVVRSDPAFGNQDN 298
L LATHE +F+I+RE P + C +CGQ+GH EC G+ V P ++
Sbjct: 240 LSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGSGQADKTVELPPI--HKKK 297
Query: 299 FIFVRLSVLREYLERELQ 316
+ F+ + VLREYLE++L+
Sbjct: 298 YQFLNIWVLREYLEKDLE 315
>01_06_1507 -
37838645-37839311,37839393-37839499,37839588-37839663,
37839747-37839869,37840051-37840208,37840311-37840385,
37840466-37840506,37840594-37840670,37840755-37840883,
37840990-37841060,37841237-37841332,37841489-37841584,
37841681-37841953,37842871-37842957,37843101-37843178,
37843350-37843514,37843622-37843768,37843921-37843983,
37844082-37844201,37844352-37844543,37844672-37844748,
37845094-37845196,37845684-37845887
Length = 1074
Score = 373 bits (917), Expect = e-103
Identities = 182/319 (57%), Positives = 224/319 (70%), Gaps = 4/319 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVECVEQKPTDVDGQLVYVDSSLPNPNGVEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V+ VE++ +++G V VD+S PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETQEKIEEVARIRNELQAKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIH 180
A+K+ + E R+R E + +G LPP++ + DSN ITPGT FM LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPPKQQSQT-CDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIML 240
RLN DPGWK +KVILSDANVPGEGEHKIM YIR QR P +PNT+H L G DADLIML
Sbjct: 180 LRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNKPRPCDVCGQLGHEMKECTG--TNPDASVVRSDPAFGNQD 297
LATHE +F+I+RE + P + C +CGQ+GH C G A +
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVPKK 299
Query: 298 NFIFVRLSVLREYLERELQ 316
+ F+ + LREYLE E +
Sbjct: 300 PYQFLNIWTLREYLEYEFR 318
>07_01_0920 +
7749937-7750264,7750416-7750546,7751686-7751747,
7752007-7752070
Length = 194
Score = 95.5 bits (227), Expect = 5e-20
Identities = 40/67 (59%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVECVEQKPTDVD-GQLVYVDSSLPNPNGVEFDNLYLDMNGII 59
MGV AF+RWL+ +YP + + VE++P +++ G V VD PNPNG++FDNLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLKFDNLYLDMNGII 60
Query: 60 HPCTHPE 66
HPC HPE
Sbjct: 61 HPCFHPE 67
>02_03_0236 +
16717320-16717496,16718082-16718240,16719410-16719472,
16720041-16720205,16721140-16721217,16721318-16721428,
16721516-16721632,16721713-16721808,16722592-16722662,
16722780-16723011
Length = 422
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 15/68 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVECVEQKPTDVDGQLVYVDSSLPNPNGVEFDNLYLDMNGIIH 60
MG+P+F+RWL +YPS++ E +P DG +VY DNLYLDMN IIH
Sbjct: 1 MGIPSFYRWLVNRYPSIVSPAKESRP--ADGIVVY-------------DNLYLDMNQIIH 45
Query: 61 PCTHPEDK 68
HP+D+
Sbjct: 46 YSFHPQDQ 53
Score = 52.0 bits (119), Expect = 6e-07
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 149 ERPKEAHFDSNCITPGTPFMDRLSKCLHYYIHDRLN-NDPGWKGI 192
++ E D N ITPGT FM+++S+ L YYI RLN +DPGWK I
Sbjct: 67 QKISEGVSDPNVITPGTEFMEKISQALTYYIRARLNSSDPGWKHI 111
Score = 41.1 bits (92), Expect = 0.001
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 18/98 (18%)
Query: 171 LSKCLHYYIH--DRLN------NDPGWKGIKVILSDANV--PG-EGEHKI---MDYIRRQ 216
+++ +HY H D++N + + I +SD NV PG E KI + Y R
Sbjct: 40 MNQIIHYSFHPQDQMNAGTDASEEEEMQKISEGVSDPNVITPGTEFMEKISQALTYYIRA 99
Query: 217 RAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTIIRE 254
R DP +H++ DADLIML LA+HE +F+I+RE
Sbjct: 100 RLNSS-DPGWKHIM---DADLIMLALASHEVHFSILRE 133
>11_06_0152 +
20669949-20670326,20670887-20670997,20671079-20671280,
20671393-20671675,20672145-20672234,20672366-20672473,
20672595-20672975,20673250-20673324,20673685-20673797,
20676233-20676742,20676807-20677300
Length = 914
Score = 32.3 bits (70), Expect = 0.54
Identities = 11/19 (57%), Positives = 13/19 (68%)
Query: 260 KPRPCDVCGQLGHEMKECT 278
+ RPC VCG GH K+CT
Sbjct: 197 RKRPCFVCGLFGHNSKQCT 215
>03_05_0005 + 19470301-19471180,19471262-19471905,19472027-19472596
Length = 697
Score = 32.3 bits (70), Expect = 0.54
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDASVV 287
L A DL+M L HE P T+ + C+VCG GH C T +A +
Sbjct: 228 LLPAKLDLLMKRLDDHEKMPQGTVKALDSHVT----CEVCGDTGHPGNNCPETREEAMYM 283
Query: 288 RSDPAFGNQDNFIFVR 303
++ + Q + +F +
Sbjct: 284 GNNNGYRRQGDLVFAQ 299
>11_01_0648 + 5254272-5254468,5254491-5254845,5254945-5255292
Length = 299
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 226 TQHVLCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPD 283
T+ L A DL+M L H+ P T+ + C+VCG +GH +C T +
Sbjct: 184 TETKLLAAKLDLLMKRLDDHDKRPQGTVKALDSHVT----CEVCGNMGHSGNDCPETREE 239
Query: 284 ASVVRSD 290
A + ++
Sbjct: 240 AMYISNN 246
>05_07_0230 -
28540114-28540323,28540414-28540548,28540779-28540953,
28541104-28541300,28541824-28541945,28542887-28543193
Length = 381
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 242 LATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPD 283
L+ E ++R+ +P PR C L + MK C NPD
Sbjct: 300 LSFSEVTSAVVRQNLRPEMPRCCP--SSLANVMKRCWDANPD 339
>07_01_1018 - 8664851-8665495,8665525-8665935,8666374-8666580
Length = 420
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 230 LCGADADLIMLGLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDASVVRS 289
L A DL+M L HE I + + C+VCG GH +C T +A + +
Sbjct: 129 LLAAKLDLLMKRLDEHEKRPQGIVKALDSHVT--CEVCGNTGHSGNDCPETREEAMYMGN 186
Query: 290 DPAFGNQ 296
+ + Q
Sbjct: 187 NNGYHPQ 193
>11_02_0113 + 8453628-8453820,8453970-8454941,8455031-8455644
Length = 592
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDASVV 287
L A DL+M L HE P TI + C+VCG +GH +C T A +
Sbjct: 178 LLAAKLDLLMKCLDDHEKRPQGTIKALDSHVT----CEVCGGMGHSRNDCPETREQAMYM 233
Query: 288 RSDPAFGNQ 296
++ + Q
Sbjct: 234 GNNNGYRPQ 242
>08_02_0174 +
13769487-13770352,13770357-13770408,13770438-13770705,
13770745-13771022,13771049-13771486
Length = 633
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 233 ADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
A DL+M L HE P T+ + C+VCG +GH +C T +A
Sbjct: 231 AKLDLLMKRLGDHEKRPQGTVKALDSHVT----CEVCGNMGHSGNDCPETREEA 280
>06_03_0073 +
16229369-16230115,16230182-16230431,16230618-16230728,
16230768-16231153
Length = 497
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDASVV 287
L A DL+M L HE P T+ + C+VCG GH +C T+ +A +
Sbjct: 253 LLAAKLDLLMKRLDDHEKRPQGTVKALDTHVT----CEVCGSTGHSGNDCPETHEEAMYI 308
>05_03_0577 +
15671570-15672432,15672571-15672785,15672825-15672954,
15672990-15673794,15674505-15674715,15674829-15675436
Length = 943
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L HE P T+ + C+VCG GH +C+ T +A
Sbjct: 228 LLAAKLDLLMKRLDDHEKWPQGTVKALDSHIT----CEVCGNTGHSENDCSETREEA 280
>11_04_0060 + 12984831-12985218,12985364-12985753,12986090-12986478
Length = 388
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 264 CDVCGQLGHEMKECTGTNPDA 284
CDVCG GH +C T +A
Sbjct: 213 CDVCGGTGHSRNDCAETREEA 233
>11_03_0131 + 10497674-10499617
Length = 647
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 261 PRPCDVCGQLGHEMKECTGTNPDA 284
P C +CG LGH KEC P+A
Sbjct: 434 PHFCFICGFLGHSDKECDKKVPNA 457
>09_02_0012 +
2965797-2966714,2966756-2967011,2967051-2967147,
2967175-2967634,2967804-2968117,2968220-2968235
Length = 686
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDASVV 287
L A DL+M L HE P T+ + C+VCG GH +C T +A +
Sbjct: 228 LLAAKLDLLMKRLDDHEKRPQGTVKALDSHVT----CEVCGSTGHSGNDCPETREEAMYM 283
Query: 288 RSDPAFGNQ 296
++ + Q
Sbjct: 284 GNNNGYRPQ 292
>08_02_0152 - 13304578-13305288
Length = 236
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 229 VLCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
+L A DL+M L HE P T+ + C+VCG GH +C T +A
Sbjct: 171 MLLAAKLDLLMKRLDDHEKRPQGTLKALDTHAT----CEVCGNTGHSGNDCPETREEA 224
>08_02_0147 - 13214179-13214889
Length = 236
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 229 VLCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
+L A DL+M L HE P T+ + C+VCG GH +C T +A
Sbjct: 171 MLLAAKLDLLMKRLDDHEKRPQGTLKALDTHAT----CEVCGNTGHSGNDCPETREEA 224
>08_01_0300 + 2427524-2427827,2429066-2429274,2429512-2430150
Length = 383
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 261 PRPCDVCGQLGHEMKECTGTNP 282
PR C CG GH + CT P
Sbjct: 19 PRRCSQCGHHGHNARTCTARGP 40
>05_03_0632 -
16404169-16405043,16405248-16405983,16406113-16406512,
16406717-16406727
Length = 673
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDASVV 287
L A DL+M L HE P + E C+VCG +GH +C T+ +A +
Sbjct: 251 LLAAKLDLLMKRLDDHEKRPQGNVKALESHVT----CEVCGGMGHSGNDCPETHEEAMYM 306
Query: 288 RSDPAFGNQ 296
++ + Q
Sbjct: 307 GNNNGYRPQ 315
>04_01_0299 -
3995709-3996185,3996209-3997075,3997142-3997252,
3997535-3997888
Length = 602
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L HE P T+ + C+VCG GH +C T+ +A
Sbjct: 159 LLAAKLDLLMKRLDDHEKWPQGTVKALDSHVT----CEVCGNTGHSGNDCPETHEEA 211
>02_05_0521 - 29726985-29727605
Length = 206
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKETQEKIEEVARIRNELQAKGAYLPP 148
M G+APRA++ R+ FR S+E + +I R R A L P
Sbjct: 60 MVRGGLAPRARLAVLRAAAFRDSREARRRIRRDRRRRRRRGMMVAALSP 108
>12_02_0396 + 18577574-18578056,18578094-18578723
Length = 370
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L HE P T+ + C+VCG GH +C T +A
Sbjct: 71 LLAAKLDLLMKRLDDHEKWPQGTVKALDSHVT----CEVCGNTGHSGNDCPKTREEA 123
>11_04_0182 - 14597325-14597881,14598082-14598243,14598416-14598950
Length = 417
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
A DL+M L HE I + + C++CG++GH +C T +A
Sbjct: 114 AKLDLLMKRLDDHEKRPQGIVKAMDSHFM--CEICGKMGHSGNDCPETREEA 163
>11_04_0179 +
14562288-14562860,14562874-14563489,14563529-14563658,
14563694-14564540
Length = 721
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L HE P TI + C+VCG GH +C T +A
Sbjct: 218 LLAAKLDLLMKRLDDHEKRPQGTIKALDSHIT----CEVCGNTGHSGNDCLETREEA 270
>08_02_0349 -
16077063-16077824,16077891-16078102,16078142-16078204,
16078439-16078865,16078870-16078919,16079006-16079360
Length = 622
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L HE P TI + C+VCG GH C T +A
Sbjct: 198 LLAAKPDLLMKRLDDHEKRPQGTIKALDSHVT----CEVCGNTGHTRNNCPETREEA 250
>07_03_1739 -
29148685-29149017,29149564-29149726,29149844-29150028,
29150708-29150977
Length = 316
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 231 CGADADLIMLGLATHEPNFTII---REEFKPNKPRPCDVCGQLGH 272
CG D +MLGLA+ + I F+P++PR D+ G + +
Sbjct: 158 CGKD-HCVMLGLASGVYRYRFIVDGERRFQPDRPREADIMGTISN 201
>03_05_0013 -
19718178-19718930,19718997-19719205,19719245-19719325,
19719581-19720613
Length = 691
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L H+ P TI + C+VCG GH +C T DA
Sbjct: 278 LLAAKLDLLMKRLDDHDKRPQGTIKALDSHVT----CEVCGGTGHSGNDCLETREDA 330
>02_02_0713 +
13209130-13209691,13209731-13209850,13209896-13210314,
13210485-13210750,13211381-13211620,13212084-13212876
Length = 799
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 233 ADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
A DL+M L HE P T+ + C+VCG GH +C T +A
Sbjct: 12 AKLDLLMKRLDDHEKRPQGTVKALDSHAT----CEVCGNTGHSRNDCPETREEA 61
>06_03_0017 -
15465831-15466043,15466091-15466249,15466664-15466968,
15467083-15467324,15467818-15467825,15467954-15468418,
15468465-15468763,15468968-15469204,15469297-15469519
Length = 716
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGT 280
L A DL+M L HE P T+ E C+VCG GH EC T
Sbjct: 9 LLAAKLDLLMKRLDDHEKRPQGTVKALESHVT----CEVCGGTGHSGNECPET 57
>05_03_0433 - 13972772-13973206
Length = 144
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L H+ P T+ + C+VCG GH +C T +A
Sbjct: 9 LLAAKLDLLMKRLDDHDKRPQDTVKALDSHVT----CEVCGNTGHSRNDCRETREEA 61
>05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718
Length = 756
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 223 DPNTQHVLCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGT 280
DP+ +H D DL++ L HE P T+ + C+V G GH +C T
Sbjct: 228 DPSARHAHRQGDLDLLIKRLDDHEKWPQGTVKALDSHVT----CEVYGGTGHSGNDCPET 283
Query: 281 NPDASVVRSDPAFGNQ 296
+A + ++ + Q
Sbjct: 284 REEAMYMGNNNGYHPQ 299
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 134 RIRNELQAKGAYLPPERPKEAHFDSNCITPGTPF 167
R++N L+ GAYL RP++A +D+ TP+
Sbjct: 97 RLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPY 130
>04_03_0274 + 13746294-13746323,13747339-13747639,13747692-13748092
Length = 243
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L H+ P TI + C+VCG +GH +C T +A
Sbjct: 172 LLAAKLDLLMKRLDDHDKRPQGTIKALDSHVT----CEVCGNMGHSGNDCPETYEEA 224
>02_03_0252 - 16882960-16884106,16884173-16884518,16892586-16892724
Length = 543
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L HE P TI + C+VCG GH +C T +A
Sbjct: 220 LLAAKLDLLMKRLDDHEKWPQGTIKALDSHVT----CEVCGGTGHSGNDCPETREEA 272
>02_03_0034 -
14142518-14142923,14142935-14143269,14143976-14144068,
14144704-14145674,14145714-14145812,14146011-14146488,
14146717-14146929
Length = 864
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDASVV 287
L A DL+M L HE P T+ + C+VCG GH +C T +A +
Sbjct: 152 LLAAKLDLLMKRLDDHEKRPQGTVKALDSHVT----CEVCGGTGHSGNDCPETREEAMYM 207
Query: 288 RSDPAFGNQ 296
++ + Q
Sbjct: 208 GNNNGYRPQ 216
>10_04_0007 +
7439378-7439677,7439873-7440308,7440483-7440593,
7440633-7440762,7440798-7441512
Length = 563
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDASVV 287
L A DL+M L HE P T+ + C+VCG GH +C T +A +
Sbjct: 163 LHAAKLDLLMKCLDDHEKQPQGTVKALDSHVT----CEVCGNTGHSGNDCPKTREEAMYM 218
Query: 288 RSDPAFGNQ 296
++ + Q
Sbjct: 219 GNNNGYRPQ 227
>04_03_0008 + 9296711-9298096
Length = 461
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L H+ P T+ + C+VCG GH +C T+ +A
Sbjct: 112 LLAAKLDLLMKRLDDHDNRPQDTVKALDLHVT----CEVCGGTGHSGNDCPETHEEA 164
>04_02_0034 -
8999618-9000358,9001439-9001618,9001666-9003621,
9004647-9004786,9004871-9005282,9006399-9006638
Length = 1222
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 230 LCGADADLIMLGLATHE--PNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTNPDA 284
L A DL+M L HE P T+ + C+VCG GH +C T+ +A
Sbjct: 451 LLAAKLDLLMKCLDDHEKRPQGTVKALDSHVT----CEVCGGTGHSGNDCLETHEEA 503
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.139 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,502,490
Number of Sequences: 37544
Number of extensions: 473338
Number of successful extensions: 1216
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1182
Number of HSP's gapped (non-prelim): 43
length of query: 322
length of database: 14,793,348
effective HSP length: 82
effective length of query: 240
effective length of database: 11,714,740
effective search space: 2811537600
effective search space used: 2811537600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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