Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000807-TA|BGIBMGA000807-PA|IPR006329|AMP deaminase,
IPR001365|Adenosine/AMP deaminase
(662 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32825| Best HMM Match : A_deaminase (HMM E-Value=0.68) 173 3e-43
SB_46189| Best HMM Match : bZIP_2 (HMM E-Value=3.3) 153 6e-37
SB_15782| Best HMM Match : DUF845 (HMM E-Value=5.8) 114 2e-25
SB_18369| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.9
SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.2
SB_35153| Best HMM Match : Zip (HMM E-Value=9.1e-05) 30 6.8
SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.0
>SB_32825| Best HMM Match : A_deaminase (HMM E-Value=0.68)
Length = 123
Score = 173 bits (422), Expect = 3e-43
Identities = 75/120 (62%), Positives = 97/120 (80%)
Query: 301 ESRLREVFLKTDNYMNGTYFANIIKEVMSDFAENKYTYSEPRISVYCKSSSEWSRLASWA 360
ESRLRE+FLKTDNY++G YFA ++KEVM D E+KY +EPRIS+Y +S +EW LA WA
Sbjct: 2 ESRLREIFLKTDNYIDGRYFAQLMKEVMVDLEESKYQNAEPRISIYGRSINEWDALAKWA 61
Query: 361 VRNDVHSPHVRWLVQVPRLYDIYRINKLLKNFQQFLSNLFDPLFEVSIDPSSNPELHKFL 420
V +DV S +VRW++Q+PRL+D+YR L+KNFQ+ L NLF PLFE +I+P S+PELHKFL
Sbjct: 62 VNHDVFSENVRWVIQIPRLFDVYRAKGLVKNFQEMLENLFMPLFEATINPQSHPELHKFL 121
>SB_46189| Best HMM Match : bZIP_2 (HMM E-Value=3.3)
Length = 445
Score = 153 bits (370), Expect = 6e-37
Identities = 103/272 (37%), Positives = 138/272 (50%), Gaps = 33/272 (12%)
Query: 42 VPIEELIRSATLLVEALGLRRYYMEAAQQSF----PETLVEFFSGHGSPRRMLDKHKESM 97
VP+EEL ++A LLVEAL +R YM + QS L + + D+
Sbjct: 175 VPVEELKQAAKLLVEALFIRFKYMSLSLQSICSATSTALSTVHDDYKLEKFYGDRGMHVP 234
Query: 98 DFTRALLNLDRLVD-PWACPSPPDRRYSFRWVDGVVAVYRSEGDAASGRPLPYRTVKF-- 154
D D + P+ C D Y+ +DGV+ V D + RP F
Sbjct: 235 DEPENTHITDFSKESPFDCEVQGDCGYAVEMIDGVIQVISCRRDHKN-RPSNCTVHPFPD 293
Query: 155 -KQYVDDMGKLSDMVADGPL------------------------KSFCFRRLSYLKSKFK 189
+++ +D L + GP+ KSF +RRL YL+S++
Sbjct: 294 LQEFFEDQNILLALSTHGPMVFLACFLFLIIAGNVTKVDLAFFSKSFAYRRLKYLESRYS 353
Query: 190 MHVLLNELHELALQKAVPHRDFYNIRKVDTHIHAASCMNQKHLLRFIKRTLRQNAHEVVA 249
+H LLNE+ ELA K VPHRDFYN+RKVDTH+HAASCMNQKHLLRFIK+ ++ E V
Sbjct: 354 LHTLLNEMKELAAMKEVPHRDFYNVRKVDTHVHAASCMNQKHLLRFIKKKVKCEGDEPVI 413
Query: 250 LQRGVPMTLKSVFEEMQLDAYDLNVDILDVHA 281
+ G TL+ VF + L YDL+VD LDVHA
Sbjct: 414 MHDGKEATLREVFAMLNLTPYDLSVDTLDVHA 445
>SB_15782| Best HMM Match : DUF845 (HMM E-Value=5.8)
Length = 283
Score = 114 bits (275), Expect = 2e-25
Identities = 55/81 (67%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
Query: 576 EPLMEEYSIAAQAWKLSSCDMCELARNSVLMSGFPHEMKQYWLGAQYVHEGPAGNDITKT 635
EPLMEEYSIAAQ WKLS CDM ELARNSVLMSGF E+K+ W+G + EG NDITKT
Sbjct: 1 EPLMEEYSIAAQVWKLSPCDMAELARNSVLMSGFEEEVKRQWIGCDKL-EG--SNDITKT 57
Query: 636 NVPDVRISFRHETLLDELDNL 656
NVP++R+ FR ETLL EL+ +
Sbjct: 58 NVPNIRVCFRQETLLQELETI 78
>SB_18369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 31.5 bits (68), Expect = 2.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 148 PYRTVKFKQYVDDMGKLSDMVADGPLKSFCFRRLSYLKSK 187
PY KF+Q G+ +D + PLK F RL K K
Sbjct: 64 PYERHKFRQMAPTEGETADQFTNKPLKKFVHGRLQIYKRK 103
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.7 bits (66), Expect = 3.9
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 239 TLRQNAHEVVALQRGVPMTLKSVFEEMQLDAYDLNVDILDVHADRNTFHR-FDKFNAKYN 297
TL+Q+ H+++A+Q + T+ + E Q + + + +HA++ ++ +K + N
Sbjct: 1703 TLKQSEHDLLAIQEDLEHTIDELVAEKQKLIQENSALVSSLHAEKEEMYKTIEKLQQERN 1762
Query: 298 PVGESRLREVFLKTDN 313
L E F+ T+N
Sbjct: 1763 -----MLHESFIATEN 1773
>SB_44788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 30.3 bits (65), Expect = 5.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 397 SNLFDPLFEVSIDPSSNPELHKFLAHVIGFDSVDDESKPEIPNLSEH 443
SN FDPL E+ +D +P + + + + + +D ++ + P H
Sbjct: 258 SNTFDPLMEIMVDIKHSPSVVRAIQRMCKAELLDGDNLYQCPRFDYH 304
>SB_35153| Best HMM Match : Zip (HMM E-Value=9.1e-05)
Length = 651
Score = 29.9 bits (64), Expect = 6.8
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 366 HSPHVRWLVQVPRLYDIYRINKLLKNFQQFLSNLFDPLFEVSIDPSSNPELHKFL 420
+S VR+L +V ++ IY++ K+L + QF +L + E S+ +P FL
Sbjct: 42 NSLRVRYLQRVKPVFSIYKLYKVLNSHAQFCPSLKEMRGESSMIRGYSPVTQAFL 96
>SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 29.5 bits (63), Expect = 9.0
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 263 EEMQLDAYDLNVDILDVHADRNTFH 287
+E+ ++ Y+L +D ++H DRN H
Sbjct: 64 DELHIETYELYIDTDELHTDRNEIH 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.137 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,133,419
Number of Sequences: 59808
Number of extensions: 852999
Number of successful extensions: 1655
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1641
Number of HSP's gapped (non-prelim): 14
length of query: 662
length of database: 16,821,457
effective HSP length: 87
effective length of query: 575
effective length of database: 11,618,161
effective search space: 6680442575
effective search space used: 6680442575
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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