Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000806-TA|BGIBMGA000806-PA|IPR001365|Adenosine/AMP
deaminase, IPR006329|AMP deaminase
         (753 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   1.7  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 8/86 (9%)

Query: 379  TDNYMNGKYFAR-IIKEVASDLEESKYQNAELRLSVYGKSPGEWAKLAKWAIQYDVHSNN 437
            TD   N K   + +++E    +E +K    ++R+ V G+S  E      W+ + +V S  
Sbjct: 1164 TDKQANSKTRRQEMMREAGRGIESAKSYVVDVRVHVPGESESETVLTLAWS-ESNVESKG 1222

Query: 438  VR---WLIQIPRL---YDIFKSNKIM 457
                 W +++PR    Y++   ++IM
Sbjct: 1223 RLLGFWRVEMPRSNADYEVCIGSQIM 1248


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,709
Number of Sequences: 429
Number of extensions: 10262
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 1
length of query: 753
length of database: 140,377
effective HSP length: 63
effective length of query: 690
effective length of database: 113,350
effective search space: 78211500
effective search space used: 78211500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)