Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000806-TA|BGIBMGA000806-PA|IPR001365|Adenosine/AMP
deaminase, IPR006329|AMP deaminase
(753 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 547 e-156
SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr ... 38 0.004
SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces po... 36 0.027
SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces p... 30 1.0
SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 1.4
SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3 Rfp1|Schizo... 29 1.8
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 29 2.4
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 28 4.1
SPAC8C9.06c |||mitochondrial translation regulator |Schizosaccha... 27 7.2
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 27 9.6
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 547 bits (1349), Expect = e-156
Identities = 271/542 (50%), Positives = 355/542 (65%), Gaps = 21/542 (3%)
Query: 198 NRGVFNMYRQGPNGEERLPYEYI-TLAQYIQDMNTMCNMIADGPLKSFCYRRLSYLSSKF 256
++G+F +Y P +I T+ Y D+ + + +DGP KSF +RRL YL ++
Sbjct: 243 HQGIFQVYENDSAYIAGTPSFHIPTIRDYYIDLEFLLSASSDGPSKSFSFRRLQYLEGRW 302
Query: 257 QLHVLLNELRELASQKAVPHRDFYNIRKVDTHIHAASCMNQKHLLRFIKKTLKTHADEVV 316
+++LLNE +ELA K VPHRDFYN+RKVDTH+H ++ NQKHLLRFIK L+ +E V
Sbjct: 303 NMYMLLNEYQELADTKKVPHRDFYNVRKVDTHVHHSALANQKHLLRFIKAKLRKCPNEKV 362
Query: 317 TLHKGTPMTLRSVFQSMNLSTYDLTVDMLDVHADRNTFHRFDKFNAKYNPIGESRLREVF 376
G +TL+ VF S+ L++YDL++D LD+HA +TFHRFDKFN KYNPIGESRLR +F
Sbjct: 363 IWRDGKFLTLQEVFDSLKLTSYDLSIDTLDMHAHTDTFHRFDKFNLKYNPIGESRLRTIF 422
Query: 377 LKTDNYMNGKYFARIIKEVASDLEESKYQNAELRLSVYGKSPGEWAKLAKWAIQYDVHSN 436
LKTDN +NG+Y A + KEV +DL KYQ AE R+S+YG++ EW KLA W I ++ S
Sbjct: 423 LKTDNDINGRYLAELTKEVFTDLRTQKYQMAEYRISIYGRNREEWDKLAAWIIDNELFSP 482
Query: 437 NVRWLIQIPRLYDIFKSNKIMNDFHEFLNNIFQPLFEVTNDPNSNIELHKFLTHVIGFDS 496
NVRWLIQ+PRLYD++K + I+ F E + N+F+PLFEVT DP ++ +LH FL VIGFDS
Sbjct: 483 NVRWLIQVPRLYDVYKKSGIVETFEEVVRNVFEPLFEVTKDPRTHPKLHVFLQRVIGFDS 542
Query: 497 VDDESKPENPMLDTEVKSPEEWDDXXXXXXXXXXXXXXXXXTVLNHFRKGPKLKIFYDTP 556
VDDESKPE + P+ WD T LN +RK
Sbjct: 543 VDDESKPERRTF-RKFPYPKHWDINLNPPYSYWLYYMYANMTSLNSWRK----------- 590
Query: 557 REQGLNTFVLRPHCGEAGPVQHLVCGLLLAENISHGLLLRKVPVXXXXXXXXXXXXXMSP 616
+G NTFVLRPHCGEAG HL LL+ I+HG+LLRKVP MSP
Sbjct: 591 -IRGFNTFVLRPHCGEAGDTDHLASAFLLSHGINHGILLRKVPFLQYLWYLDQIPIAMSP 649
Query: 617 LSNNSLFLNYHRNPLPEFLARGLCITLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDM 676
LSNN+LFL Y +NP + RGL ++LSTDDPLQF FT+EPL+EEY++AAQ++KLS+ DM
Sbjct: 650 LSNNALFLAYDKNPFLTYFKRGLNVSLSTDDPLQFAFTREPLIEEYAVAAQIYKLSAVDM 709
Query: 677 CELARNSVLMSGFPHEMKQYWLGPNYTKEGVAGNDITRTNVPDIRISFRHETILDELTNI 736
CELARNSVL SGF ++K+ WLG ++ DI RTNVP IR+++R T+ E+ +
Sbjct: 710 CELARNSVLQSGFERQLKERWLGVDF-------QDIDRTNVPIIRLAYRALTLTQEIALV 762
Query: 737 FK 738
K
Sbjct: 763 NK 764
>SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 339
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 587 ENISHGLLLRKVPVXXXXXXXXXXXXXMSPLSNNSLFLNYHRNPLPEFLARGLCITLSTD 646
E I HG+ + P + P SN ++ + + L GL +T+++D
Sbjct: 219 ERIDHGINILDDPELIKLALERNIPFTVCPFSNEIVYPGKAQPEIRIMLDTGLKVTINSD 278
Query: 647 DPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHEMKQYWL 698
DP H + E +++A + L+ ++ ++ RNS + E + ++L
Sbjct: 279 DPAYMHCFY--ITENFNLAQKGASLTKKELVQICRNSFEAAWISEEKRNHYL 328
>SPBC1198.02 |dea2||adenine deaminase Dea2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 367
Score = 35.5 bits (78), Expect = 0.027
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 569 HCGEAGPVQHLVCGL--LLAENISHGLLLRKVPVXXXXXXXXXXXXXMSPLSNNSLFL-- 624
H GE G ++ GL L + I HG+ L + M PLSN L
Sbjct: 209 HAGEEGDPSYIRSGLDNLSLQRIDHGIRLVEDKELMKRVAEENIMLTMCPLSNLKLRCVN 268
Query: 625 NYHRNPLPEFLARGLCITLSTDDPLQF-HFTKE---PLMEEYSIAAQVW 669
+ P+ EFL G+ +++ DDP F +T E + + +++ + W
Sbjct: 269 SIAELPVREFLEAGVPFSINCDDPAYFGGYTLENYFAIQKHFNLTVKEW 317
>SPAPB2B4.05 |vma5||V-type ATPase subunit C|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 28 APYEVPQFPIEQIEKKLLIQRQLNVKAAECAQSV 61
AP++VP F +E ++ + QL + A+CA ++
Sbjct: 41 APFDVPPFKVESLDVLISQSEQLTKQDAQCASAI 74
>SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 615 SPLSNNSLFLNYHRNPLPEF-LARGLCITLSTDDPLQFHFTKEPLMEEYSIAAQVWKLS- 672
S + N + L Y R P+P++ +GL TL + H +K+ +E + + K S
Sbjct: 194 SDICNEQIELEYKRKPIPDYDFMKGLETTL--QELYVEHQSKKRRLELFQLTNNHQKNSE 251
Query: 673 SCDMCEL 679
+C+MC L
Sbjct: 252 ACEMCRL 258
>SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3
Rfp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 254
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 471 LFEVTNDPNSNIELHKFLTHVIGFDSVDDESKPENPML 508
+ ++T P+ +E T++I D++ D+S P +P+L
Sbjct: 14 VIDLTRSPSPPVETSISSTNIIDLDAIPDDSFPSSPVL 51
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 310 THADEVVTLHKGTPMTLRSVFQSMNLSTYDLTVDMLDVHADRN 352
T LH+GTP+T+ SV + Y++ +LD +N
Sbjct: 223 TFLQSAANLHQGTPITISSVEELAGAVPYNIIRSLLDTAYTKN 265
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 443 QIPRLYDIFKSNKIMNDFHEFLNNIFQPLFEVTNDPNSNIELHKFLTHVIGFDSVDDESK 502
Q+ L D+ S M+D HE N + PL T+ N+ + F + G D + S
Sbjct: 160 QLTELKDVMHS---MSDSHEQNNALHPPLSRTTSFVADNVSVGSFASSTSGLDILTGTSA 216
Query: 503 PEN 505
E+
Sbjct: 217 RES 219
>SPAC8C9.06c |||mitochondrial translation regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 931
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 9/45 (20%)
Query: 420 EWAKLAKWAIQYDVHSNNVR--WLI-------QIPRLYDIFKSNK 455
EW++L K +YD N R WL+ I R+Y+IF S+K
Sbjct: 809 EWSRLEKLGFEYDDSLQNKRIIWLLYDDRLDAAIKRVYNIFLSSK 853
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 27.1 bits (57), Expect = 9.6
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 473 EVTNDPNSNIELHKFLTHVIGFDSVDDESKPENPMLDTEVKSPEEW 518
EV NDPNS + + K T+ + SV D S P + + E K EW
Sbjct: 793 EVLNDPNSYLTVRKSGTYTL--LSVSDSSCP-GTIQNVEQKYQVEW 835
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,502,896
Number of Sequences: 5004
Number of extensions: 151492
Number of successful extensions: 372
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 363
Number of HSP's gapped (non-prelim): 12
length of query: 753
length of database: 2,362,478
effective HSP length: 78
effective length of query: 675
effective length of database: 1,972,166
effective search space: 1331212050
effective search space used: 1331212050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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