Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000805-TA|BGIBMGA000805-PA|undefined
         (75 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ451688-1|ABE02809.1| 1217|Homo sapiens HBV DNAPTP1-transactiva...    27   9.2  
BC111783-1|AAI11784.1| 1217|Homo sapiens chromosome 17 open read...    27   9.2  
BC110373-1|AAI10374.1|  692|Homo sapiens C17orf68 protein protein.     27   9.2  
BC026057-1|AAH26057.1|  541|Homo sapiens C17orf68 protein protein.     27   9.2  
AL831955-1|CAD38600.1| 1033|Homo sapiens hypothetical protein pr...    27   9.2  
AK025823-1|BAB15247.1|  541|Homo sapiens protein ( Homo sapiens ...    27   9.2  

>DQ451688-1|ABE02809.1| 1217|Homo sapiens HBV DNAPTP1-transactivated
           protein B protein.
          Length = 1217

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 32  LNKRVAETHETDSCLRPTRYLQLIS 56
           L KRV+ +H    C R + Y+Q++S
Sbjct: 972 LEKRVSRSHNVYCCFRSSTYVQVLS 996


>BC111783-1|AAI11784.1| 1217|Homo sapiens chromosome 17 open reading
           frame 68 protein.
          Length = 1217

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 32  LNKRVAETHETDSCLRPTRYLQLIS 56
           L KRV+ +H    C R + Y+Q++S
Sbjct: 972 LEKRVSRSHNVYCCFRSSTYVQVLS 996


>BC110373-1|AAI10374.1|  692|Homo sapiens C17orf68 protein protein.
          Length = 692

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 32  LNKRVAETHETDSCLRPTRYLQLIS 56
           L KRV+ +H    C R + Y+Q++S
Sbjct: 447 LEKRVSRSHNVYCCFRSSTYVQVLS 471


>BC026057-1|AAH26057.1|  541|Homo sapiens C17orf68 protein protein.
          Length = 541

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 32  LNKRVAETHETDSCLRPTRYLQLIS 56
           L KRV+ +H    C R + Y+Q++S
Sbjct: 296 LEKRVSRSHNVYCCFRSSTYVQVLS 320


>AL831955-1|CAD38600.1| 1033|Homo sapiens hypothetical protein
           protein.
          Length = 1033

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 32  LNKRVAETHETDSCLRPTRYLQLIS 56
           L KRV+ +H    C R + Y+Q++S
Sbjct: 939 LEKRVSRSHNVYCCFRSSTYVQVLS 963


>AK025823-1|BAB15247.1|  541|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22170 fis, clone HRC00652. ).
          Length = 541

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 32  LNKRVAETHETDSCLRPTRYLQLIS 56
           L KRV+ +H    C R + Y+Q++S
Sbjct: 296 LEKRVSRSHNVYCCFRSSTYVQVLS 320


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.134    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,119,559
Number of Sequences: 224733
Number of extensions: 401596
Number of successful extensions: 397
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 391
Number of HSP's gapped (non-prelim): 6
length of query: 75
length of database: 73,234,838
effective HSP length: 54
effective length of query: 21
effective length of database: 61,099,256
effective search space: 1283084376
effective search space used: 1283084376
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)