Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000805-TA|BGIBMGA000805-PA|undefined
(75 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g42180.1 68415.m05220 expressed protein 26 2.6
At4g16570.1 68417.m02508 protein arginine N-methyltransferase-re... 25 4.6
At3g22104.1 68416.m02789 phototropic-responsive NPH3 protein-rel... 25 4.6
At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2) ident... 25 4.6
At4g20450.1 68417.m02984 leucine-rich repeat protein kinase, put... 25 6.1
At3g52640.2 68416.m05800 nicastrin-related contains weak similar... 25 6.1
At3g52640.1 68416.m05799 nicastrin-related contains weak similar... 25 6.1
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 25 6.1
At2g36200.1 68415.m04444 kinesin motor protein-related 25 6.1
At2g17930.1 68415.m02076 FAT domain-containing protein / phospha... 25 6.1
At1g26170.1 68414.m03194 importin beta-2 subunit family protein ... 25 8.0
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 25 8.0
>At2g42180.1 68415.m05220 expressed protein
Length = 166
Score = 26.2 bits (55), Expect = 2.6
Identities = 11/16 (68%), Positives = 12/16 (75%)
Query: 9 TKNFPFSFDVDVEDEE 24
TK FPFS D VEDE+
Sbjct: 81 TKPFPFSLDGHVEDED 96
>At4g16570.1 68417.m02508 protein arginine
N-methyltransferase-related contains weak similarity to
protein arginine N-methyltransferase 2 (EC 2.1.1.-)
(Swiss-Prot:P55345) [Homo sapiens]
Length = 724
Score = 25.4 bits (53), Expect = 4.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 42 TDSCLRPTRYLQLISGVRRNNEYPTIPEGVIT 73
TD L T YL +++ RRN Y E IT
Sbjct: 68 TDGLLATTSYLDMLNDSRRNIAYRLAIEKTIT 99
>At3g22104.1 68416.m02789 phototropic-responsive NPH3
protein-related contains BTB/POZ domain,
INTERPRO:IPR000210
Length = 506
Score = 25.4 bits (53), Expect = 4.6
Identities = 10/30 (33%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 27 RTTPLLNKRVAETHETDSCLRPTRYLQLIS 56
+ + L+++ +AE D CL+P+++L LI+
Sbjct: 334 KVSSLIDQYIAEV-APDPCLKPSKFLSLIT 362
>At3g05630.1 68416.m00626 phospholipase D, putative (PLDP2)
identical to SP|Q9M9W8 Phospholipase D p2 (EC 3.1.4.4)
(AtPLDp2) (Phospholipase D2 PHOX and PX containing
domain) (Phospholipase D zeta 2) (PLDzeta2) {Arabidopsis
thaliana}; similar to phospholipase D GB:BAA24577 from
[Rattus norvegicus]; contains Pfam profile: PF00614
phospholipase D, PF00169 PH domain, PF00787 PX domain
Length = 1046
Score = 25.4 bits (53), Expect = 4.6
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 14 FSFDVDVEDEEPGRTTPLLNKRVAETHETDSCLRPTRYLQLISG 57
F ++ ED R L +R+ + HE + C R + L+ G
Sbjct: 737 FISGLEKEDTILNRVLEALYRRILKAHEENKCFRVVIVIPLLPG 780
>At4g20450.1 68417.m02984 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 898
Score = 25.0 bits (52), Expect = 6.1
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 4 GFVGSTKNFPFSFDVDVEDEEPGRTTPLLNKRVAETHETDSCLRPTRYLQLISGVRRNNE 63
G V + P S ++D+ + G TTP ++ D+ T L+LIS
Sbjct: 156 GTVEEVIHMPKSNNLDICLVKTGTTTPFISSLELRPLRDDTYTTTTGSLKLISRWYFRKP 215
Query: 64 YPTIPEGVI 72
+PT+ E +I
Sbjct: 216 FPTL-ESII 223
>At3g52640.2 68416.m05800 nicastrin-related contains weak similarity
to Nicastrin precursor (Swiss-Prot:Q92542) [Homo
sapiens]
Length = 705
Score = 25.0 bits (52), Expect = 6.1
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 4 GFVGSTKNFPFSFDVDVEDEEPGRTTPLLNKRVAETHETDSCLR 47
G+VG F ++F D + G TT + +K V + + C++
Sbjct: 561 GYVGDVSRFLWNFLADKTSVQKGNTTSVCSKGVCSKTD-EVCIK 603
>At3g52640.1 68416.m05799 nicastrin-related contains weak similarity
to Nicastrin precursor (Swiss-Prot:Q92542) [Homo
sapiens]
Length = 676
Score = 25.0 bits (52), Expect = 6.1
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 4 GFVGSTKNFPFSFDVDVEDEEPGRTTPLLNKRVAETHETDSCLR 47
G+VG F ++F D + G TT + +K V + + C++
Sbjct: 532 GYVGDVSRFLWNFLADKTSVQKGNTTSVCSKGVCSKTD-EVCIK 574
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 25.0 bits (52), Expect = 6.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 19 DVEDEEPGRTTPLLNKRVAETHETDSCLRPTR 50
D E E+ G T PL AE H + +R ++
Sbjct: 556 DSESEDEGDTVPLKQSSNAEDHTSKKLIRKSK 587
>At2g36200.1 68415.m04444 kinesin motor protein-related
Length = 1056
Score = 25.0 bits (52), Expect = 6.1
Identities = 15/50 (30%), Positives = 19/50 (38%)
Query: 15 SFDVDVEDEEPGRTTPLLNKRVAETHETDSCLRPTRYLQLISGVRRNNEY 64
+F + EP TP N+ T T LR L+ R NN Y
Sbjct: 938 TFQQQYMEYEPTGATPTKNEPEIPTKATIESLRAMPIETLVEEFRENNSY 987
>At2g17930.1 68415.m02076 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF02259 FAT domain, PF00454
Phosphatidylinositol 3- and 4-kinase, PF02260: FATC
domain
Length = 3795
Score = 25.0 bits (52), Expect = 6.1
Identities = 12/61 (19%), Positives = 29/61 (47%)
Query: 12 FPFSFDVDVEDEEPGRTTPLLNKRVAETHETDSCLRPTRYLQLISGVRRNNEYPTIPEGV 71
FP + +++E+ P+++ + H+ RP L+ G++ ++ P +P +
Sbjct: 2532 FPIVWVTLLKEEQVALAKPMISLLSKDYHKKQQGHRPNVVQALLEGLQLSHPQPRMPSEL 2591
Query: 72 I 72
I
Sbjct: 2592 I 2592
>At1g26170.1 68414.m03194 importin beta-2 subunit family protein
similar to Importin9 isoform 1 [Mus musculus]
GI:15186756; contains Pfam profile PF03810:
Importin-beta N-terminal domain
Length = 931
Score = 24.6 bits (51), Expect = 8.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 23 EEPGRTTPLLNKRVAETHETDSCLRPTRYLQLISGVRRNNEYPTI 67
EE P L K +++ T+ R L L+SG + E PT+
Sbjct: 130 EEWPELVPFLLKLISDPSNTNGVHGALRCLALLSGELDDKEVPTL 174
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 24.6 bits (51), Expect = 8.0
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 17 DVDVEDEEPGRTTPLLNKRVAETHETDSCLRPTRYLQLISGVRR 60
D D E++E ++T + ++ + HE C R Q + G +R
Sbjct: 202 DEDEEEDEEDKSTAHIARKRSNAHECTICHRVFSSGQALGGHKR 245
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.134 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,964,507
Number of Sequences: 28952
Number of extensions: 69460
Number of successful extensions: 89
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 78
Number of HSP's gapped (non-prelim): 12
length of query: 75
length of database: 12,070,560
effective HSP length: 55
effective length of query: 20
effective length of database: 10,478,200
effective search space: 209564000
effective search space used: 209564000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 51 (24.6 bits)
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