GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000805-TA|BGIBMGA000805-PA|undefined
         (75 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4SLA2 Cluster: Chromosome 7 SCAF14557, whole genome sh...    32   2.6  
UniRef50_Q5ZZA1 Cluster: Putative uncharacterized protein; n=4; ...    32   2.6  
UniRef50_Q23BT5 Cluster: Putative uncharacterized protein; n=1; ...    32   2.6  

>UniRef50_Q4SLA2 Cluster: Chromosome 7 SCAF14557, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7
           SCAF14557, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 995

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 10  KNFPFSFDVDVEDEEPGRTTPLLNKRVAETHET 42
           K FP + D  + +E  GR TP+  +R + +H+T
Sbjct: 321 KTFPINIDPQIPEEHLGRPTPMPRQRRSPSHQT 353


>UniRef50_Q5ZZA1 Cluster: Putative uncharacterized protein; n=4;
           Legionella pneumophila|Rep: Putative uncharacterized
           protein - Legionella pneumophila subsp. pneumophila
           (strain Philadelphia 1 /ATCC 33152 / DSM 7513)
          Length = 600

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 28  TTPLLNKRVAETHETDSCLRPTRYLQLISGVRRNNEYPT 66
           T PLL K ++   E D  + PT   +L+S +  + E PT
Sbjct: 264 TMPLLMKNLSHDFEKDKAIEPTNIRKLLSAIWNDPELPT 302


>UniRef50_Q23BT5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1563

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 8   STKNFPFSFDVDVEDEEPGR-TTPLLNKRVAETHETDSCLRPTRYLQL 54
           S+ NFPFSF+V V    P +       + +  T   D+ L+PT+Y ++
Sbjct: 465 SSSNFPFSFNVIVTVNIPSQEQVTFQQEEILITQMMDTLLKPTQYFEV 512


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.134    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,357,141
Number of Sequences: 1657284
Number of extensions: 3233231
Number of successful extensions: 3980
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3978
Number of HSP's gapped (non-prelim): 3
length of query: 75
length of database: 575,637,011
effective HSP length: 54
effective length of query: 21
effective length of database: 486,143,675
effective search space: 10209017175
effective search space used: 10209017175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 65 (30.3 bits)