GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000805-TA|BGIBMGA000805-PA|undefined
         (75 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    19   7.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    19   7.6  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)

Query: 25  PGRTTPLLNKRVAET 39
           PG+ TPL+++    T
Sbjct: 248 PGKRTPLISRAKINT 262


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 18.6 bits (36), Expect = 7.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query: 29  TPLLNKRVAETHETDS 44
           +P+L+ R  E  E D+
Sbjct: 136 SPILSNRFGENEEADA 151


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.134    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,194
Number of Sequences: 317
Number of extensions: 644
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 75
length of database: 114,650
effective HSP length: 45
effective length of query: 30
effective length of database: 100,385
effective search space:  3011550
effective search space used:  3011550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.3 bits)
S2: 36 (18.6 bits)