Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000805-TA|BGIBMGA000805-PA|undefined
(75 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 27 0.30
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 27 0.40
SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr 1... 24 2.1
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 24 2.1
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 24 2.8
SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 23 6.5
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 23 6.5
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 22 8.5
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 22 8.5
SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|c... 22 8.5
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 27.1 bits (57), Expect = 0.30
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 31 LLNKRVAETHETDSCLRPTRYL 52
+LNK++AET TD C+ R L
Sbjct: 289 VLNKKIAETSLTDECINSYRKL 310
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 26.6 bits (56), Expect = 0.40
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 7 GSTKNFPFSFDVDVEDEEPGRTTPLLNKRVAETHETDSCLRPTRYLQLISGVRRNNEYPT 66
G +K + ED E RT P R ET E D L T ++++ + NE
Sbjct: 228 GISKQTEMIVAIRAEDLERARTRPSRTDRFNETFEID--LEKTNEVEIVV-YEKKNEKLL 284
Query: 67 IPEGVI 72
+P G++
Sbjct: 285 LPVGLL 290
>SPAC1399.01c |||purine permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 24.2 bits (50), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 13 PFSFDVDVEDEEPG-RTTPLLNKRVAETHETD 43
P+ FD D+ ++ PG TT +N + E D
Sbjct: 543 PYEFDPDLTNDSPGLSTTNGVNNGIVEVRGID 574
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 24.2 bits (50), Expect = 2.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 22 DEEPGRTTPLLNKRVAETHETDSCLRPTRYLQLIS 56
DE+ ++ P+ + + T+S L PT Y +L+S
Sbjct: 328 DEKGSKSDPINAPNSSSSISTNSPLAPTAYYKLLS 362
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 23.8 bits (49), Expect = 2.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 6 VGSTKNFPFSFDVDVEDEEPGRTTPLLNKRVAETHETD 43
+ TK + ++ DE PG T +NK+ + ET+
Sbjct: 180 LSKTKTLAYEETINQLDETPGGTNYPMNKKKTLSSETN 217
>SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 426
Score = 22.6 bits (46), Expect = 6.5
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 25 PGRTTPLLNKRVAETHETDSCLRPTRYLQL 54
P R ++ +AE + SC++ YL L
Sbjct: 236 PKRVITSMHNNIAELYNPISCIKSLPYLSL 265
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 22.6 bits (46), Expect = 6.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 56 SGVRRNNEYPTIPEGVITS 74
+G R+N Y +P+G +TS
Sbjct: 128 AGFSRSNPYYIVPQGRVTS 146
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 22.2 bits (45), Expect = 8.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 8 STKNFPFSFDVDVEDEEPGRTTPLLNKRVAETHETDSC 45
S+ + F++ D + +P T P N +V E + SC
Sbjct: 118 SSNDKDFAYFEDKSENQPLVTLPNENNQVIEPLSSQSC 155
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 22.2 bits (45), Expect = 8.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 1 MAAGFVGSTKNFPFSFDVDVEDEEPGRT 28
++A + +F S D++ EDE+P RT
Sbjct: 156 VSAVVASADASFDDSRDIESEDEQPLRT 183
>SPAC30.03c |tsn1|tsn, mug90|translin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 22.2 bits (45), Expect = 8.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 39 THETDSCLRPTRYLQLISGVRRNNEYPTIPE 69
T D LRPT L +S V + + P PE
Sbjct: 117 TGRLDKSLRPTYSLLSLSEVGQILQVPVFPE 147
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.134 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,043
Number of Sequences: 5004
Number of extensions: 13790
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 10
length of query: 75
length of database: 2,362,478
effective HSP length: 55
effective length of query: 20
effective length of database: 2,087,258
effective search space: 41745160
effective search space used: 41745160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 45 (22.2 bits)
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