GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000804-TA|BGIBMGA000804-PA|IPR008387|ATPase, F0 complex,
subunit F6, mitochondrial
         (69 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MIP9 Cluster: Mitochondrial ATP synthase coupling fac...    61   5e-09
UniRef50_Q09JF4 Cluster: Mitochondrial F1F0 ATP-synthase subunit...    46   1e-04
UniRef50_Q4QQ07 Cluster: IP06415p; n=2; Drosophila melanogaster|...    42   0.003
UniRef50_Q29E93 Cluster: GA11349-PA; n=1; Drosophila pseudoobscu...    42   0.003
UniRef50_Q24407 Cluster: ATP synthase-coupling factor 6, mitocho...    41   0.006
UniRef50_Q1WCC6 Cluster: Putative uncharacterized protein; n=2; ...    36   0.21 
UniRef50_UPI0000584DD8 Cluster: PREDICTED: similar to MGC68738 p...    32   2.6  

>UniRef50_Q5MIP9 Cluster: Mitochondrial ATP synthase coupling factor
           6; n=3; Endopterygota|Rep: Mitochondrial ATP synthase
           coupling factor 6 - Aedes albopictus (Forest day
           mosquito)
          Length = 106

 Score = 60.9 bits (141), Expect = 5e-09
 Identities = 26/58 (44%), Positives = 35/58 (60%)

Query: 9   KNRGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPIDEQAA 66
           K+ GGK+ D +P +             QYGG  G+DMTAFP+ KFEEPK+ PI+  +A
Sbjct: 49  KSSGGKLVDPTPEIERELKQELEKLAKQYGGASGVDMTAFPTFKFEEPKMGPINSSSA 106


>UniRef50_Q09JF4 Cluster: Mitochondrial F1F0 ATP-synthase subunit
           Cf6; n=1; Argas monolakensis|Rep: Mitochondrial F1F0
           ATP-synthase subunit Cf6 - Argas monolakensis
          Length = 109

 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 21/53 (39%), Positives = 26/53 (49%)

Query: 9   KNRGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPI 61
           K  G    D +P +             QYGGG GIDMT FP  KF +P+LD +
Sbjct: 52  KMSGDLFVDPNPVIMKEYEDDIKRAEVQYGGGKGIDMTKFPEFKFADPQLDSV 104


>UniRef50_Q4QQ07 Cluster: IP06415p; n=2; Drosophila
           melanogaster|Rep: IP06415p - Drosophila melanogaster
           (Fruit fly)
          Length = 159

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 20/60 (33%), Positives = 25/60 (41%)

Query: 9   KNRGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPIDEQAAPK 68
           K+  GK  D  P               QYGGG G+DM  FP  K  +  +DPI     P+
Sbjct: 54  KSPKGKPVDPGPEFEAELKEVTERLALQYGGGEGVDMLEFPKFKLPDIDIDPISVDDLPE 113


>UniRef50_Q29E93 Cluster: GA11349-PA; n=1; Drosophila
          pseudoobscura|Rep: GA11349-PA - Drosophila
          pseudoobscura (Fruit fly)
          Length = 180

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 21/58 (36%), Positives = 26/58 (44%)

Query: 4  KNVCQKNRGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPI 61
          K   +K+  GK  DA P               +YGGG G+DM  FP  K  E  LDP+
Sbjct: 38 KEYREKSPTGKPLDAGPEFEKELNETLEKLALKYGGGEGVDMLEFPKFKEPEVTLDPL 95


>UniRef50_Q24407 Cluster: ATP synthase-coupling factor 6,
           mitochondrial precursor; n=4; Endopterygota|Rep: ATP
           synthase-coupling factor 6, mitochondrial precursor -
           Drosophila melanogaster (Fruit fly)
          Length = 106

 Score = 40.7 bits (91), Expect = 0.006
 Identities = 18/56 (32%), Positives = 28/56 (50%)

Query: 8   QKNRGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPIDE 63
           QK+ GGK+ D++P +             Q+G     DM  FP  +F + K+DPI +
Sbjct: 48  QKSAGGKLVDSNPDIERELKTELDRVAKQFGSDGKTDMLKFPEFQFPDVKVDPITQ 103


>UniRef50_Q1WCC6 Cluster: Putative uncharacterized protein; n=2;
          Otophysi|Rep: Putative uncharacterized protein -
          Ictalurus punctatus (Channel catfish)
          Length = 66

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 5  NVCQKNRGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLKFEEPKLDPI 61
          +V  K+ GG V DA P+               YGGG   D+T FP   F EPKL+ +
Sbjct: 12 SVKSKSSGGVV-DAGPSYQKNMTEEISKLQRLYGGG---DLTKFPEFTFTEPKLEEV 64


>UniRef50_UPI0000584DD8 Cluster: PREDICTED: similar to MGC68738
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to MGC68738 protein -
           Strongylocentrotus purpuratus
          Length = 112

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 8   QKNRGGKVPDASPAVXXXXXXXXXXXXXQYGGGPGIDMTAFPSLKFEE 55
           +K+ GGK+ D+ P                +GGG   DMT FP+ +F++
Sbjct: 59  KKSAGGKLVDSDPQTEKEMATEIGKLNKMFGGG---DMTQFPTFEFKD 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.310    0.134    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,594,667
Number of Sequences: 1657284
Number of extensions: 2128979
Number of successful extensions: 1408
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1403
Number of HSP's gapped (non-prelim): 7
length of query: 69
length of database: 575,637,011
effective HSP length: 48
effective length of query: 21
effective length of database: 496,087,379
effective search space: 10417834959
effective search space used: 10417834959
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 65 (30.3 bits)