GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000803-TA|BGIBMGA000803-PA|IPR012336|Thioredoxin-like
fold, IPR001200|Phosducin
         (213 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    23   5.2  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   9.1  

>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 115 NQHLRELAVKFPYTKFLKAIAQTCIPNFPERNLPSLFVYFEG-EMKQQ 161
           N+ L EL  +F + K+L    +  I N    N   + ++F+   MKQ+
Sbjct: 62  NKQLTELEKEFHFNKYLTRARRIEIANALHLNETQVKIWFQNRRMKQK 109


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 110 QCALINQHLRELAVKFPYTKFLKAIAQTCIPNFPERNLPSLFVYFEGEMK 159
           Q  LIN  LR       Y +  K + ++  P     N  + F+Y+ G +K
Sbjct: 210 QAVLINCLLRNYLHYSLYDQADKLVNKSVFPETASNNECARFLYYLGRIK 259


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.135    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,992
Number of Sequences: 2123
Number of extensions: 7575
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 2
length of query: 213
length of database: 516,269
effective HSP length: 61
effective length of query: 152
effective length of database: 386,766
effective search space: 58788432
effective search space used: 58788432
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)