Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000803-TA|BGIBMGA000803-PA|IPR012336|Thioredoxin-like
fold, IPR001200|Phosducin
(213 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122105-1|AAM52617.1| 240|Drosophila melanogaster GH10422p pro... 234 8e-62
AE014296-2075|AAF49974.2| 240|Drosophila melanogaster CG18593-P... 234 8e-62
AF110513-1|AAG21889.1| 240|Drosophila melanogaster IAP-associat... 232 3e-61
BT009952-1|AAQ22421.1| 276|Drosophila melanogaster RH54247p pro... 57 2e-08
AE014296-2548|AAF49608.2| 276|Drosophila melanogaster CG7650-PA... 57 2e-08
AY071254-1|AAL48876.1| 216|Drosophila melanogaster RE29349p pro... 45 7e-05
AY060862-1|AAL28410.1| 216|Drosophila melanogaster GM03430p pro... 45 7e-05
AE014297-1213|AAF54565.1| 216|Drosophila melanogaster CG4511-PA... 45 7e-05
BT016140-1|AAV37025.1| 180|Drosophila melanogaster AT28962p pro... 31 0.90
AE013599-2741|AAO41348.1| 180|Drosophila melanogaster CG33136-P... 31 0.90
>AY122105-1|AAM52617.1| 240|Drosophila melanogaster GH10422p
protein.
Length = 240
Score = 234 bits (572), Expect = 8e-62
Identities = 104/208 (50%), Positives = 150/208 (72%), Gaps = 6/208 (2%)
Query: 7 KEAEFSEADIVNMIEDTIQQK------EAEKQKQXXXXXXXXXXXXXXXXXXAVIEEYRR 60
KEAE +E I +++D IQ++ E ++ K+ AV+E+YR+
Sbjct: 25 KEAEITEDQIQKLMDDAIQRRTDLPLNEGQRDKKIDDMSLDELDELEDSEDEAVLEQYRQ 84
Query: 61 KRLAEIKKLSEKPRFGEVREVSGQDYVQEVNKAGQDIWVVIHLYKQGIQQCALINQHLRE 120
+R+AE++ +EK RFG VRE+SGQDYV EV KAG+ IWVV+HLY G+ CALI+ H+++
Sbjct: 85 RRIAEMRATAEKARFGSVREISGQDYVNEVTKAGEGIWVVLHLYANGVPLCALIHHHMQQ 144
Query: 121 LAVKFPYTKFLKAIAQTCIPNFPERNLPSLFVYFEGEMKQQFVGSHELRGTSLTCDELEY 180
LAV+FP TKF++++A TCIPNFPE+NLP++F+Y EG +++Q++G ELRG LT +ELE+
Sbjct: 145 LAVRFPQTKFVRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLELRGDKLTAEELEF 204
Query: 181 ILGKVGAVETSITEDPRPKIKDKLFTDL 208
+LG+ GAV T ITEDPRP+I+DK+ DL
Sbjct: 205 MLGQAGAVPTEITEDPRPQIRDKMLADL 232
>AE014296-2075|AAF49974.2| 240|Drosophila melanogaster CG18593-PA
protein.
Length = 240
Score = 234 bits (572), Expect = 8e-62
Identities = 104/208 (50%), Positives = 150/208 (72%), Gaps = 6/208 (2%)
Query: 7 KEAEFSEADIVNMIEDTIQQK------EAEKQKQXXXXXXXXXXXXXXXXXXAVIEEYRR 60
KEAE +E I +++D IQ++ E ++ K+ AV+E+YR+
Sbjct: 25 KEAEITEDQIQKLMDDAIQRRTDLPLNEGQRDKKIDDMSLDELDELEDSEDEAVLEQYRQ 84
Query: 61 KRLAEIKKLSEKPRFGEVREVSGQDYVQEVNKAGQDIWVVIHLYKQGIQQCALINQHLRE 120
+R+AE++ +EK RFG VRE+SGQDYV EV KAG+ IWVV+HLY G+ CALI+ H+++
Sbjct: 85 RRIAEMRATAEKARFGSVREISGQDYVNEVTKAGEGIWVVLHLYANGVPLCALIHHHMQQ 144
Query: 121 LAVKFPYTKFLKAIAQTCIPNFPERNLPSLFVYFEGEMKQQFVGSHELRGTSLTCDELEY 180
LAV+FP TKF++++A TCIPNFPE+NLP++F+Y EG +++Q++G ELRG LT +ELE+
Sbjct: 145 LAVRFPQTKFVRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLELRGDKLTAEELEF 204
Query: 181 ILGKVGAVETSITEDPRPKIKDKLFTDL 208
+LG+ GAV T ITEDPRP+I+DK+ DL
Sbjct: 205 MLGQAGAVPTEITEDPRPQIRDKMLADL 232
>AF110513-1|AAG21889.1| 240|Drosophila melanogaster IAP-associated
factor VIAF1 protein.
Length = 240
Score = 232 bits (567), Expect = 3e-61
Identities = 104/208 (50%), Positives = 149/208 (71%), Gaps = 6/208 (2%)
Query: 7 KEAEFSEADIVNMIEDTIQQK------EAEKQKQXXXXXXXXXXXXXXXXXXAVIEEYRR 60
KEAE +E I +++D IQ++ E ++ K+ AV+E+YR+
Sbjct: 25 KEAEITEDQIQKLMDDAIQRRTDLPLNEGQRDKKIDDMSLDELDELEDSEDEAVLEQYRQ 84
Query: 61 KRLAEIKKLSEKPRFGEVREVSGQDYVQEVNKAGQDIWVVIHLYKQGIQQCALINQHLRE 120
+R+AE++ +EK RFG VRE+SGQDYV EV KAG+ IWVV+HLY G+ CALI+ H+++
Sbjct: 85 RRIAEMRATAEKARFGSVREISGQDYVNEVTKAGEGIWVVLHLYANGVPLCALIHHHMQQ 144
Query: 121 LAVKFPYTKFLKAIAQTCIPNFPERNLPSLFVYFEGEMKQQFVGSHELRGTSLTCDELEY 180
LAV+FP TKF+ ++A TCIPNFPE+NLP++F+Y EG +++Q++G ELRG LT +ELE+
Sbjct: 145 LAVRFPQTKFVCSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLELRGDKLTAEELEF 204
Query: 181 ILGKVGAVETSITEDPRPKIKDKLFTDL 208
+LG+ GAV T ITEDPRP+I+DK+ DL
Sbjct: 205 MLGQAGAVPTEITEDPRPQIRDKMLADL 232
>BT009952-1|AAQ22421.1| 276|Drosophila melanogaster RH54247p
protein.
Length = 276
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/103 (27%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 55 IEEYRRKRLAE-IKKLSEKPRFGEVREV-SGQDYVQEVNKAGQDIWVVIHLYKQGIQQCA 112
+++Y+++R+AE +++ +FG+V+++ S ++++ V + + ++IH+Y++ + CA
Sbjct: 132 LQQYQKQRMAEMLRQTGHHQQFGQVQQLTSHEEFLACVEQENKHTTIIIHIYERQLAACA 191
Query: 113 LINQHLRELAVKFPYTKFLKAIAQTC--IPNFPERNLPSLFVY 153
+N+ L LA +P KF K + +F + LP+L VY
Sbjct: 192 TLNKCLDSLASDYPSIKFAKICSSVAGMSRDFRTKGLPALLVY 234
>AE014296-2548|AAF49608.2| 276|Drosophila melanogaster CG7650-PA
protein.
Length = 276
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/103 (27%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 55 IEEYRRKRLAE-IKKLSEKPRFGEVREV-SGQDYVQEVNKAGQDIWVVIHLYKQGIQQCA 112
+++Y+++R+AE +++ +FG+V+++ S ++++ V + + ++IH+Y++ + CA
Sbjct: 132 LQQYQKQRMAEMLRQTGHHQQFGQVQQLTSHEEFLACVEQENKHTTIIIHIYERQLAACA 191
Query: 113 LINQHLRELAVKFPYTKFLKAIAQTC--IPNFPERNLPSLFVY 153
+N+ L LA +P KF K + +F + LP+L VY
Sbjct: 192 TLNKCLDSLASDYPSIKFAKICSSVAGMSRDFRTKGLPALLVY 234
>AY071254-1|AAL48876.1| 216|Drosophila melanogaster RE29349p
protein.
Length = 216
Score = 45.2 bits (102), Expect = 7e-05
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 59 RRKRLAEIKKLSEKPR------FGEVREVSGQDYVQEVNKAGQDIWVVIHLYKQGIQQCA 112
R +RL E+K L+ K + G E++ + E++K +I V H Y+ ++C
Sbjct: 39 REQRLREMKDLNNKKQEWLRNGHGTYTELADEKEFFEMSKKSPNI--VCHFYRDSTERCK 96
Query: 113 LINQHLRELAVKFPYTKFLKAIAQTCIPNFPER----NLPSLFVYFEGEMKQQFVGSHEL 168
+++ HL+ LA K KF K A+ P +R +P++ + + + K VG +L
Sbjct: 97 IVDMHLKILAAKHVEAKFCKVNAEK-TPFLTQRLRIKVIPTIALVKDSKTKDFIVGFTDL 155
Query: 169 RG-TSLTCDELEYILGKVGAVETSITEDPRPKIKDKLF 205
+ LE+ + GA++ P +K K F
Sbjct: 156 GNCDDFATEMLEWRIAHSGAIDYKGDLMQPPDVKRKPF 193
>AY060862-1|AAL28410.1| 216|Drosophila melanogaster GM03430p
protein.
Length = 216
Score = 45.2 bits (102), Expect = 7e-05
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 59 RRKRLAEIKKLSEKPR------FGEVREVSGQDYVQEVNKAGQDIWVVIHLYKQGIQQCA 112
R +RL E+K L+ K + G E++ + E++K +I V H Y+ ++C
Sbjct: 39 REQRLREMKDLNNKKQEWLRNGHGTYTELADEKEFFEMSKKSPNI--VCHFYRDSTERCK 96
Query: 113 LINQHLRELAVKFPYTKFLKAIAQTCIPNFPER----NLPSLFVYFEGEMKQQFVGSHEL 168
+++ HL+ LA K KF K A+ P +R +P++ + + + K VG +L
Sbjct: 97 IVDMHLKILAAKHVEAKFCKVNAEK-TPFLTQRLRIKVIPTIALVKDSKTKDFIVGFTDL 155
Query: 169 RG-TSLTCDELEYILGKVGAVETSITEDPRPKIKDKLF 205
+ LE+ + GA++ P +K K F
Sbjct: 156 GNCDDFATEMLEWRIAHSGAIDYKGDLMQPPDVKRKPF 193
>AE014297-1213|AAF54565.1| 216|Drosophila melanogaster CG4511-PA
protein.
Length = 216
Score = 45.2 bits (102), Expect = 7e-05
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 59 RRKRLAEIKKLSEKPR------FGEVREVSGQDYVQEVNKAGQDIWVVIHLYKQGIQQCA 112
R +RL E+K L+ K + G E++ + E++K +I V H Y+ ++C
Sbjct: 39 REQRLREMKDLNNKKQEWLRNGHGTYTELADEKEFFEMSKKSPNI--VCHFYRDSTERCK 96
Query: 113 LINQHLRELAVKFPYTKFLKAIAQTCIPNFPER----NLPSLFVYFEGEMKQQFVGSHEL 168
+++ HL+ LA K KF K A+ P +R +P++ + + + K VG +L
Sbjct: 97 IVDMHLKILAAKHVEAKFCKVNAEK-TPFLTQRLRIKVIPTIALVKDSKTKDFIVGFTDL 155
Query: 169 RG-TSLTCDELEYILGKVGAVETSITEDPRPKIKDKLF 205
+ LE+ + GA++ P +K K F
Sbjct: 156 GNCDDFATEMLEWRIAHSGAIDYKGDLMQPPDVKRKPF 193
>BT016140-1|AAV37025.1| 180|Drosophila melanogaster AT28962p
protein.
Length = 180
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 63 LAEIKKLSEKPRFGEVREVSGQDYVQEVNKAGQDIWVVIHLYKQGIQQCALI 114
L E +KL E PR E+ DY+ + Q++W+++ L CALI
Sbjct: 121 LNEYRKLYETPRKTEL------DYIASIKAIEQNLWLILRLVIMACSVCALI 166
>AE013599-2741|AAO41348.1| 180|Drosophila melanogaster CG33136-PA
protein.
Length = 180
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 63 LAEIKKLSEKPRFGEVREVSGQDYVQEVNKAGQDIWVVIHLYKQGIQQCALI 114
L E +KL E PR E+ DY+ + Q++W+++ L CALI
Sbjct: 121 LNEYRKLYETPRKTEL------DYIASIKAIEQNLWLILRLVIMACSVCALI 166
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.317 0.135 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,330,193
Number of Sequences: 52641
Number of extensions: 370404
Number of successful extensions: 871
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 861
Number of HSP's gapped (non-prelim): 10
length of query: 213
length of database: 24,830,863
effective HSP length: 82
effective length of query: 131
effective length of database: 20,514,301
effective search space: 2687373431
effective search space used: 2687373431
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -