GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000802-TA|BGIBMGA000802-PA|IPR003191|Guanylate-binding
protein
         (528 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    27   0.32 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    26   0.56 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    26   0.56 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    26   0.74 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    25   0.98 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    25   1.3  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    25   1.7  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    25   1.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    25   1.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   2.3  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   4.0  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   4.0  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   4.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   6.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   9.2  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 27.1 bits (57), Expect = 0.32
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 82  EWIGVEDEPLEGFKWRGGSERETTGLLLWS 111
           +WIG +DE     K +   +    GL++W+
Sbjct: 324 QWIGYDDEESVALKVQFAKDHNMAGLMIWT 353


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 26.2 bits (55), Expect = 0.56
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 426 YRMIGTPVVFATVAVLAYMLVVL 448
           Y++ GTP++F  + ++ Y L V+
Sbjct: 162 YQVTGTPIIFHNLTLITYSLCVI 184


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 26.2 bits (55), Expect = 0.56
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 426 YRMIGTPVVFATVAVLAYMLVVL 448
           Y++ GTP++F  + ++ Y L V+
Sbjct: 162 YQVTGTPIIFHNLTLITYSLCVI 184


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 25.8 bits (54), Expect = 0.74
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 80  GGEWIGVEDEPLEGFKWRGGSERETTGLLLWS---QPFKATLANGEKVVIFLM 129
           G +W+G +DE     K     E    G+++WS     F+ +  +G+  +I  M
Sbjct: 827 GNQWVGFDDERSLKTKMAWLKEEGFGGIMIWSVDMDDFRGSCGSGKYPLINAM 879



 Score = 25.0 bits (52), Expect = 1.3
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 79  SGGEWIGVEDEPLEGFKWRGGSERETTGLLLWS---QPFKATLANGE 122
           +G +WIG +DE     K +   +    G ++W+     F  T+  G+
Sbjct: 396 NGDQWIGFDDEKSIRNKMKWIKDNGFAGAMVWTIDMDDFSGTVCGGQ 442


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 25.4 bits (53), Expect = 0.98
 Identities = 9/32 (28%), Positives = 17/32 (53%)

Query: 80  GGEWIGVEDEPLEGFKWRGGSERETTGLLLWS 111
           G +W+G +D      K    +E+   G+++WS
Sbjct: 326 GNQWLGFDDPKSIQVKVEFANEKNLGGVMVWS 357


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 80  GGEWIGVEDEPLEGFKWRGGSERETTGLLLWS 111
           G  W+  +DE   G K +   +    G+ +WS
Sbjct: 310 GTNWVSYDDEQSIGLKAKYAKDNGLAGVAVWS 341


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 83  WIGVEDEPLEGFKWRGGSERETTGLLLWS 111
           WIG ++E     K     E+   G+ +WS
Sbjct: 323 WIGYDNEQSVTIKTEYAKEKNLAGVFIWS 351


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 80  GGEWIGVEDEPLEGFKWRGGSERETTGLLLWS---QPFKATLANG 121
           G +W+G +D      K    + +   G+++WS     F+    NG
Sbjct: 327 GNQWLGFDDPKSIQLKVEFANSKNLGGVMVWSLDTDDFRGICGNG 371


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 80  GGEWIGVEDEPLEGFKWRGGSERETTGLLLWS---QPFKATLANG 121
           G +W+G +D      K    + +   G+++WS     F+    NG
Sbjct: 327 GNQWLGFDDPKSIQLKVEFANSKNLGGVMVWSLDTDDFRGICGNG 371


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 79  SGGEWIGVEDEPLEGFK 95
           +GG W+G ED    G+K
Sbjct: 382 NGGFWVGYEDTDTAGYK 398


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 515 TAAAVGYGADKK 526
           TAAA+ YG DKK
Sbjct: 5   TAAAIAYGLDKK 16


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 515 TAAAVGYGADKK 526
           TAAA+ YG DKK
Sbjct: 5   TAAAIAYGLDKK 16


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 515 TAAAVGYGADKK 526
           TAAA+ YG DKK
Sbjct: 5   TAAAIAYGLDKK 16


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 7/32 (21%), Positives = 15/32 (46%)

Query: 80  GGEWIGVEDEPLEGFKWRGGSERETTGLLLWS 111
           G +W+G ++      K +        G+++WS
Sbjct: 331 GNQWVGYDNPKSIAIKVQYAKSLNLAGVMIWS 362


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 80  GGEWIGVEDEPLEGFK 95
           GG W+G ED    G K
Sbjct: 375 GGAWVGYEDPDTAGNK 390


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,989
Number of Sequences: 317
Number of extensions: 4101
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 16
length of query: 528
length of database: 114,650
effective HSP length: 60
effective length of query: 468
effective length of database: 95,630
effective search space: 44754840
effective search space used: 44754840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)