Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000802-TA|BGIBMGA000802-PA|IPR003191|Guanylate-binding
protein
(528 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 459 e-129
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 459 e-129
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 457 e-128
Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical pr... 296 2e-80
AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical ... 31 2.6
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 459 bits (1131), Expect = e-129
Identities = 226/484 (46%), Positives = 301/484 (62%), Gaps = 8/484 (1%)
Query: 17 VVPGPEHTFXXXXXXXXXXXXXXXIKDRAVVIISVAGAFRKGKSFLLDFFLRYLQHKY-- 74
VV +H+F + D+ V +I VAGA+RKGKSFLL+FFLRYL +
Sbjct: 38 VVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFLRYLTWRSKA 97
Query: 75 --VLGE---SGGEWIGVEDEPLEGFKWRGGSERETTGLLLWSQPFKATLANGEKVVIFLM 129
V+GE +W+ + PL GF WRGGSER+T G+L+WS+PF NGE++ + LM
Sbjct: 98 DKVMGEVELDNSQWMS-PNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLM 156
Query: 130 DTQGTFDSQSTVRDNATVFALSTLISSVQIYNLSQNIEEDDLQHLQLFTDYGQLAQESSS 189
DTQG FDSQSTV+D AT+FALST+ISSVQIYNLSQNI+EDDLQHLQLFT+YG+LA E S+
Sbjct: 157 DTQGAFDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSA 216
Query: 190 GRPFQRLQFLVRDWSFPYDHPYGAXXXXXXXXXXXXIHEGQHPELQNLREYVTRIFDEIA 249
+PFQ L FLVRDWSFPY+ +G + E QH ELQ LR+++ F++I
Sbjct: 217 SKPFQSLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQHIRSCFEDIR 276
Query: 250 CFLMPHPGLKVATNPDFNGKLADISPEFKDSLKQLLPMLLAPENLVPKLIEGQKVKAKDL 309
CFLMPHPGLKVATNP+F+GKL DI EF+ L ++P LL LV K I GQK+ ++L
Sbjct: 277 CFLMPHPGLKVATNPNFDGKLVDIENEFQQQLGVMIPRLLDSHALVHKEINGQKMTCREL 336
Query: 310 LLYFKTYMKVFNGTELPEPRTILAATSEANNLSAVAEAREVYETLMEEICGGTRPYVQPR 369
L YFK YM +F G +LPEP+++L AT+EANNL+AVA AR VY+ MEE+CGG PY+
Sbjct: 337 LEYFKAYMHIFRGQDLPEPKSMLMATAEANNLAAVASARAVYQREMEEVCGGDTPYMSTN 396
Query: 370 QLEEEHHRVMNKAIHAFDSKKKMGGKELADGYKAXXXXXXXXXXXXXRSHNEAKNIYRMI 429
+L E H RV N AI F + +KMGG + + + N KN+++ +
Sbjct: 397 ELLEHHDRVKNIAIREFRNARKMGGVDFSMQFLERLESDLQESYENYLKVNNGKNLFKSM 456
Query: 430 GTPVVFATVAVLAYMLVVLGNMFXXXXXXXXXXXXXXXXLVMIAVWIYSRTTGQMRDVGA 489
TP V T+ ++ Y+ + + + VW YSR +G +R+ G
Sbjct: 457 RTPTVLVTLMIIDYIFQEFFQLIGLDFIAGLCSSVLCLVIGALGVWAYSRYSGHLREAGG 516
Query: 490 QLDE 493
+D+
Sbjct: 517 YVDD 520
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 459 bits (1131), Expect = e-129
Identities = 226/484 (46%), Positives = 301/484 (62%), Gaps = 8/484 (1%)
Query: 17 VVPGPEHTFXXXXXXXXXXXXXXXIKDRAVVIISVAGAFRKGKSFLLDFFLRYLQHKY-- 74
VV +H+F + D+ V +I VAGA+RKGKSFLL+FFLRYL +
Sbjct: 38 VVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFLRYLTWRSKA 97
Query: 75 --VLGE---SGGEWIGVEDEPLEGFKWRGGSERETTGLLLWSQPFKATLANGEKVVIFLM 129
V+GE +W+ + PL GF WRGGSER+T G+L+WS+PF NGE++ + LM
Sbjct: 98 DKVMGEVELDNSQWMS-PNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLM 156
Query: 130 DTQGTFDSQSTVRDNATVFALSTLISSVQIYNLSQNIEEDDLQHLQLFTDYGQLAQESSS 189
DTQG FDSQSTV+D AT+FALST+ISSVQIYNLSQNI+EDDLQHLQLFT+YG+LA E S+
Sbjct: 157 DTQGAFDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSA 216
Query: 190 GRPFQRLQFLVRDWSFPYDHPYGAXXXXXXXXXXXXIHEGQHPELQNLREYVTRIFDEIA 249
+PFQ L FLVRDWSFPY+ +G + E QH ELQ LR+++ F++I
Sbjct: 217 SKPFQSLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQHIRSCFEDIR 276
Query: 250 CFLMPHPGLKVATNPDFNGKLADISPEFKDSLKQLLPMLLAPENLVPKLIEGQKVKAKDL 309
CFLMPHPGLKVATNP+F+GKL DI EF+ L ++P LL LV K I GQK+ ++L
Sbjct: 277 CFLMPHPGLKVATNPNFDGKLVDIENEFQQQLGVMIPRLLDSHALVHKEINGQKMTCREL 336
Query: 310 LLYFKTYMKVFNGTELPEPRTILAATSEANNLSAVAEAREVYETLMEEICGGTRPYVQPR 369
L YFK YM +F G +LPEP+++L AT+EANNL+AVA AR VY+ MEE+CGG PY+
Sbjct: 337 LEYFKAYMHIFRGQDLPEPKSMLMATAEANNLAAVASARAVYQREMEEVCGGDTPYMSTN 396
Query: 370 QLEEEHHRVMNKAIHAFDSKKKMGGKELADGYKAXXXXXXXXXXXXXRSHNEAKNIYRMI 429
+L E H RV N AI F + +KMGG + + + N KN+++ +
Sbjct: 397 ELLEHHDRVKNIAIREFRNARKMGGVDFSMQFLERLESDLQESYENYLKVNNGKNLFKSM 456
Query: 430 GTPVVFATVAVLAYMLVVLGNMFXXXXXXXXXXXXXXXXLVMIAVWIYSRTTGQMRDVGA 489
TP V T+ ++ Y+ + + + VW YSR +G +R+ G
Sbjct: 457 RTPTVLVTLMIIDYIFQEFFQLIGLDFIAGLCSSVLCLVIGALGVWAYSRYSGHLREAGG 516
Query: 490 QLDE 493
+D+
Sbjct: 517 YVDD 520
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 457 bits (1126), Expect = e-128
Identities = 226/486 (46%), Positives = 301/486 (61%), Gaps = 8/486 (1%)
Query: 17 VVPGPEHTFXXXXXXXXXXXXXXXIKDRAVVIISVAGAFRKGKSFLLDFFLRYLQHKY-- 74
VV +H+F + D+ V +I VAGA+RKGKSFLL+FFLRYL +
Sbjct: 38 VVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFLRYLTWRSKA 97
Query: 75 --VLGE---SGGEWIGVEDEPLEGFKWRGGSERETTGLLLWSQPFKATLANGEKVVIFLM 129
V+GE +W+ + PL GF WRGGSER+T G+L+WS+PF NGE++ + LM
Sbjct: 98 DKVMGEVELDNSQWMS-PNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKNGEEIAVLLM 156
Query: 130 DTQGTFDSQSTVRDNATVFALSTLISSVQIYNLSQNIEEDDLQHLQLFTDYGQLAQESSS 189
DTQG FDSQSTV+D AT+FALST+ISSVQIYNLSQNI+EDDLQHLQLFT+YG+LA E S+
Sbjct: 157 DTQGAFDSQSTVKDCATIFALSTMISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSA 216
Query: 190 GRPFQRLQFLVRDWSFPYDHPYGAXXXXXXXXXXXXIHEGQHPELQNLREYVTRIFDEIA 249
+PFQ L FLVRDWSFPY+ +G + E QH ELQ LR+++ F++I
Sbjct: 217 SKPFQSLLFLVRDWSFPYEAEFGFQGGQRVLDRRLEVSEKQHAELQQLRQHIRSCFEDIR 276
Query: 250 CFLMPHPGLKVATNPDFNGKLADISPEFKDSLKQLLPMLLAPENLVPKLIEGQKVKAKDL 309
CFLMPHPGLKVATNP+F+GKL DI EF+ L ++P LL LV K I GQK+ ++L
Sbjct: 277 CFLMPHPGLKVATNPNFDGKLVDIENEFQQQLGVMIPRLLDSHALVHKEINGQKMTCREL 336
Query: 310 LLYFKTYMKVFNGTELPEPRTILAATSEANNLSAVAEAREVYETLMEEICGGTRPYVQPR 369
L YFK YM +F G +LPEP+++L AT+EANNL+AVA AR VY+ MEE+CGG PY+
Sbjct: 337 LEYFKAYMHIFRGQDLPEPKSMLMATAEANNLAAVASARAVYQREMEEVCGGDTPYMSTN 396
Query: 370 QLEEEHHRVMNKAIHAFDSKKKMGGKELADGYKAXXXXXXXXXXXXXRSHNEAKNIYRMI 429
+L E H RV N AI F + +KMGG + + + N KN+++ +
Sbjct: 397 ELLEHHDRVKNIAIREFRNARKMGGVDFSMQFLERLESDLQESYENYLKVNNGKNLFKSM 456
Query: 430 GTPVVFATVAVLAYMLVVLGNMFXXXXXXXXXXXXXXXXLVMIAVWIYSRTTGQMRDVGA 489
TP V T+ ++ Y+ + + + VW YSR +G +R+ G
Sbjct: 457 RTPTVLVTLMIIDYIFQEFFQLIGLDFIAGLCSSVLCLVIGALGVWAYSRYSGHLREAGG 516
Query: 490 QLDEIA 495
+ I+
Sbjct: 517 YIFRIS 522
>Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical
protein Y41E3.3 protein.
Length = 520
Score = 296 bits (727), Expect = 2e-80
Identities = 155/387 (40%), Positives = 226/387 (58%), Gaps = 6/387 (1%)
Query: 43 DRAVVIISVAGAFRKGKSFLLDFFLRYLQ--HKYVLGESGGEWIGVEDEPLEGFKWRGGS 100
++ +VIISVAGAFRKGKSFLL+FFL YL HK +S EW+ +D L GF WR G
Sbjct: 61 NKKIVIISVAGAFRKGKSFLLNFFLEYLYSLHKSQQSDSSLEWL-TDDCQLHGFHWRAGV 119
Query: 101 ERETTGLLLWSQPFKATLANGEKVVIFLMDTQGTFDSQSTVRDNATVFALSTLISSVQIY 160
+R+T G+ LW +P GE + LMDTQGTFD+ ST + TVFALST++SSVQIY
Sbjct: 120 KRDTVGIWLWGEPIMIESVTGEMFAVVLMDTQGTFDNNSTYQQCMTVFALSTIVSSVQIY 179
Query: 161 NLSQNIEEDDLQHLQLFTDYGQLAQES--SSGRPFQRLQFLVRDWSFPYDHPYGAXXXXX 218
N+ NI+ED LQHL LF +YG++A E + G+PFQ+L F VRD+ ++ +G
Sbjct: 180 NVVDNIQEDALQHLSLFVEYGRIAMEQPHNFGKPFQQLVFCVRDFKNQEEYEFGENGGTD 239
Query: 219 XXXXXXXIHEGQHPELQNLREYVTRIFDEIACFLMPHPGLKVATNPDFNGKLADISPEFK 278
+ Q E++ +RE + F++I C+L+PHPG KVA F G + D+ P F+
Sbjct: 240 FLDNVLQTNPEQPEEIKQVRELLREYFEDIQCYLLPHPGYKVAERQSFRGHVKDLRPLFR 299
Query: 279 DSLKQLLPMLLAPENLVPKLIEGQKVKAKDLLLYFKTYMKVFNGTELPEPRTILAATSEA 338
+ LK+++P LL P L PK++ G+ V + ++ YFK Y F+G LP+P++IL A ++
Sbjct: 300 EELKKMVPNLLGPHILKPKIVNGKTVTCRKMIQYFKEYAASFDGETLPQPQSILNANAKL 359
Query: 339 NNLSAVAEAREVYETLMEEICGGTRPYVQPRQLEEEHHRVMNKAIHAFDSKKKMGGKELA 398
+ A EA+ Y M+ GTR + ++L E H + A++ FD ++G KE+
Sbjct: 360 ICIEAAHEAKVNYSRGMDRSTYGTR-MMSEKKLLEAHIKHGITALNIFDKCPRIGAKEVR 418
Query: 399 DGYKAXXXXXXXXXXXXXRSHNEAKNI 425
+ + NEAK +
Sbjct: 419 NLLLEKLQEDINAELEKYKRLNEAKRV 445
>AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical
protein R155.4 protein.
Length = 873
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 338 ANNLSAVAEAREVYETLMEEIC--GGTRPYVQPRQLEEEHH 376
ANN S AE+ + + IC G+ P V P L+E HH
Sbjct: 10 ANNHSNFAESLSILTIIWLNICHCAGSTPLVNPSGLQEPHH 50
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,382,336
Number of Sequences: 27539
Number of extensions: 439805
Number of successful extensions: 917
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 902
Number of HSP's gapped (non-prelim): 5
length of query: 528
length of database: 12,573,161
effective HSP length: 85
effective length of query: 443
effective length of database: 10,232,346
effective search space: 4532929278
effective search space used: 4532929278
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
- SilkBase 1999-2023 -