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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000801-TA|BGIBMGA000801-PA|IPR001440|Tetratricopeptide
TPR_1, IPR013026|Tetratricopeptide region
         (289 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch...    57   3e-09
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc...    47   3e-06
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc...    34   0.027
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi...    34   0.027
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ...    30   0.34 
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch...    30   0.34 
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi...    30   0.34 
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch...    29   1.0  
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz...    27   2.4  
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha...    27   2.4  
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos...    27   2.4  
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo...    27   3.1  
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ...    27   3.1  
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces...    26   5.5  
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ...    26   5.5  
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po...    25   9.5  
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ...    25   9.5  

>SPBC3F6.01c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 473

 Score = 56.8 bits (131), Expect = 3e-09
 Identities = 28/94 (29%), Positives = 53/94 (56%)

Query: 183 KAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMY 242
           KA+ +      LY+N +   L+  +Y  A++  ++AI+ DPE  KA +RR+ A+  +   
Sbjct: 30  KAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQP 89

Query: 243 VEAWADIQRVLQITPAEKAAVQQSRHLKPIIDRI 276
            EA  D ++ L + P++ AA ++ R  + ++ RI
Sbjct: 90  KEAVGDFRKALALAPSDPAARKKLRECEQLVKRI 123



 Score = 28.3 bits (60), Expect = 1.4
 Identities = 19/61 (31%), Positives = 28/61 (45%)

Query: 197 NLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQIT 256
           N A+  L+      A+DL  +AI+ D  N      RSLA+   E Y  A  D  + ++  
Sbjct: 10  NEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECD 69

Query: 257 P 257
           P
Sbjct: 70  P 70


>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 358

 Score = 47.2 bits (107), Expect = 3e-06
 Identities = 24/82 (29%), Positives = 42/82 (51%)

Query: 189 DLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWAD 248
           D+++  Y+N A C L +  Y   L+ C + ++ D  + KA YR + A   L+ Y EA   
Sbjct: 99  DIEIACYSNRAACNLLFENYRQVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAKEC 158

Query: 249 IQRVLQITPAEKAAVQQSRHLK 270
           I+    + P + A +  S+ L+
Sbjct: 159 IRLCSLVHPNDPAILALSKELQ 180


>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 317

 Score = 33.9 bits (74), Expect = 0.027
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 191 KVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQ 250
           K+KL  N A   +   +Y+ ALDL  +AI+ DP +      R+ AY  L  +  A  D  
Sbjct: 85  KLKLEGNNA---IAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDAL 141

Query: 251 RVLQITP 257
             L + P
Sbjct: 142 TCLSLDP 148


>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
           Tom70|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 625

 Score = 33.9 bits (74), Expect = 0.027
 Identities = 19/54 (35%), Positives = 26/54 (48%)

Query: 195 YNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWAD 248
           ++N A C     ++E  +   + A+  D   VKAL RRS AY  L    EA  D
Sbjct: 187 FSNRAACYAAIGDFEQVIKDTSEALSLDSSYVKALNRRSAAYEQLGKLDEALMD 240


>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 862

 Score = 30.3 bits (65), Expect = 0.34
 Identities = 18/92 (19%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVL 253
           +Y    +  L+   ++ ++    + ++  P N  AL+  ++ Y+      +A   ++R+L
Sbjct: 462 MYYQANNPSLRERYHQKSVQSYQKCLEKQPTNTNALFHLAMQYSERRAITDAMQIVRRLL 521

Query: 254 QITPAEKAAVQQSRHLKPIIDRINEDYSSVVK 285
           ++ P  K ++  S HL  +    +E Y++ +K
Sbjct: 522 EVNP--KYSI-VSWHLLVLCVSCSEQYAAGIK 550


>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 476

 Score = 30.3 bits (65), Expect = 0.34
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 135 MEASIHHKEKGVELV-KEKRILDAFRRFSKALKMVVAXXXXXXXXXXXXKAVAITDLKVK 193
           M A    +++  EL  K+K I +AF +  K  + + A             A+        
Sbjct: 9   MNAGTESQQEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAI-------- 60

Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEA 245
            Y+N A   +Q  E+E AL    ++ +  P+  K   R   AY GL +  EA
Sbjct: 61  YYSNRAATYMQIGEFELALCDAKQSDRIKPDVPKTQSRIRQAYEGLSILNEA 112


>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
           spliced|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 383

 Score = 30.3 bits (65), Expect = 0.34
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVL 253
           +Y + +   L+   Y   +  C  A+  +P + K ++RR LAY  L     A  D +  L
Sbjct: 43  VYADSSLTHLRKKSYTKVVHDCTYALVINPYDKKVIWRRGLAYLRLGHPHLANRDWEHSL 102

Query: 254 QITPAEKAAVQQSRH 268
           ++ P     +Q+S H
Sbjct: 103 ELDP-NNTYIQKSLH 116


>SPCC162.08c |nup211||nuclear pore complex associated
           protein|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1837

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVL 253
           L   LA  +++     + L +CN  ++     V  L   +L  T ++  ++A  D+  + 
Sbjct: 749 LQEQLASKKIEVQNVSSQLSICNSQLEQSNHIVDNLKSENLLLTSVKDKLKA--DLSNL- 805

Query: 254 QITPAEKAAVQQSR-HLKPIIDRINEDYSSVVKKMFS 289
               ++ +++QQ   H+K  I+  N++Y++ V  M S
Sbjct: 806 ---ESKLSSLQQDNFHMKAQIESSNQEYTATVDSMNS 839


>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
           Mad1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 689

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 6/54 (11%)

Query: 106 ELVKEISCDVELKEVTEEQLISDWSWERLMEASIHHKEK------GVELVKEKR 153
           E +K++S  +EL+++  EQ +     E+L  A     EK       VE++KE++
Sbjct: 221 ESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEK 274


>SPBC23E6.09 |ssn6||transcriptional corepressor
           Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1102

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 204 QYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYV-EAWADIQRVLQITP 257
           Q N+Y+ ALD  +RAI+ +P   +  Y     Y      + +A    QR  ++ P
Sbjct: 630 QINQYQDALDAYSRAIRLNPYISEVWYDLGTLYESCHNQISDALDAYQRAAELDP 684


>SPBC725.07 |pex5||peroxisomal targeting signal receptor
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 598

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 16/65 (24%), Positives = 26/65 (40%)

Query: 193 KLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRV 252
           K+   L        EYE + D   +A++ +P N     +   A T  E   EA +   R 
Sbjct: 439 KVQAGLGIIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRA 498

Query: 253 LQITP 257
           + + P
Sbjct: 499 VSLQP 503


>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 944

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 220 KYDPENVKALYRRSLAYTG-LEMYVEAWADIQRVLQITPAEKAAVQQSRHLKPIIDRINE 278
           K DP  ++ L  + +++   L+ Y E + +   +LQ+ P      +   H+  I+ RIN 
Sbjct: 464 KLDP--IRGLRSKLISFERFLQKYPE-YRENTILLQVAPESLQDSEHLPHISDIVTRINS 520

Query: 279 DYSSVVKK 286
            YS++  +
Sbjct: 521 AYSNIASR 528


>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
           subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 665

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 15/58 (25%), Positives = 28/58 (48%)

Query: 198 LAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQI 255
           LA+C     E+  AL   NRAI+ DP    A   +   ++  E Y ++    ++ +++
Sbjct: 437 LANCFSLQREHSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRV 494


>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 591

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 215 CNRAIKYDPENVKALYRRSLAYTGLEMY 242
           CN+AI+ DP   KA  R++ A   L+ Y
Sbjct: 456 CNKAIELDPNFAKAYVRKAQALFMLKDY 483


>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 565

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 19/85 (22%), Positives = 35/85 (41%)

Query: 198 LAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQITP 257
           + H  ++     AA++    A+  + ++ +A Y     Y  L+M+  A    QR   + P
Sbjct: 378 MGHEYVELKNTHAAIESYRLAVDVNRKDYRAWYGLGQTYEVLDMHFYALYYFQRATALRP 437

Query: 258 AEKAAVQQSRHLKPIIDRINEDYSS 282
            ++   Q   +    IDR  E   S
Sbjct: 438 YDQRMWQALGNCYEKIDRPQEAIKS 462


>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1014

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 185 VAITDLKVKLYNNLAHCQLQYNEYEAALDLCN 216
           +A   LK  LY N+   QL +  Y++ +DL N
Sbjct: 479 LAAETLKKSLYKNVDQPQLLFQFYQSIMDLNN 510


>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
           Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1006

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 192 VKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYR 231
           + L+ N+  C L+  EYE A       +  D  N  AL +
Sbjct: 466 IGLWYNMGVCYLELKEYEHAQQCMEAILIVDNSNTNALIK 505


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.319    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,241,527
Number of Sequences: 5004
Number of extensions: 49061
Number of successful extensions: 159
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 139
Number of HSP's gapped (non-prelim): 21
length of query: 289
length of database: 2,362,478
effective HSP length: 72
effective length of query: 217
effective length of database: 2,002,190
effective search space: 434475230
effective search space used: 434475230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)

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