Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000801-TA|BGIBMGA000801-PA|IPR001440|Tetratricopeptide
TPR_1, IPR013026|Tetratricopeptide region
(289 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 57 3e-09
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 47 3e-06
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 34 0.027
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 34 0.027
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 30 0.34
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 30 0.34
SPBC32H8.06 |mug93||TPR repeat protein, meiotically spliced|Schi... 30 0.34
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 1.0
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 27 2.4
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 2.4
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 2.4
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 27 3.1
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 27 3.1
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 26 5.5
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 26 5.5
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 25 9.5
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 25 9.5
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 56.8 bits (131), Expect = 3e-09
Identities = 28/94 (29%), Positives = 53/94 (56%)
Query: 183 KAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMY 242
KA+ + LY+N + L+ +Y A++ ++AI+ DPE KA +RR+ A+ +
Sbjct: 30 KAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQP 89
Query: 243 VEAWADIQRVLQITPAEKAAVQQSRHLKPIIDRI 276
EA D ++ L + P++ AA ++ R + ++ RI
Sbjct: 90 KEAVGDFRKALALAPSDPAARKKLRECEQLVKRI 123
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 197 NLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQIT 256
N A+ L+ A+DL +AI+ D N RSLA+ E Y A D + ++
Sbjct: 10 NEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAIECD 69
Query: 257 P 257
P
Sbjct: 70 P 70
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 47.2 bits (107), Expect = 3e-06
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 189 DLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWAD 248
D+++ Y+N A C L + Y L+ C + ++ D + KA YR + A L+ Y EA
Sbjct: 99 DIEIACYSNRAACNLLFENYRQVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAKEC 158
Query: 249 IQRVLQITPAEKAAVQQSRHLK 270
I+ + P + A + S+ L+
Sbjct: 159 IRLCSLVHPNDPAILALSKELQ 180
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 33.9 bits (74), Expect = 0.027
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 191 KVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQ 250
K+KL N A + +Y+ ALDL +AI+ DP + R+ AY L + A D
Sbjct: 85 KLKLEGNNA---IAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDAL 141
Query: 251 RVLQITP 257
L + P
Sbjct: 142 TCLSLDP 148
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 33.9 bits (74), Expect = 0.027
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 195 YNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWAD 248
++N A C ++E + + A+ D VKAL RRS AY L EA D
Sbjct: 187 FSNRAACYAAIGDFEQVIKDTSEALSLDSSYVKALNRRSAAYEQLGKLDEALMD 240
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 30.3 bits (65), Expect = 0.34
Identities = 18/92 (19%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVL 253
+Y + L+ ++ ++ + ++ P N AL+ ++ Y+ +A ++R+L
Sbjct: 462 MYYQANNPSLRERYHQKSVQSYQKCLEKQPTNTNALFHLAMQYSERRAITDAMQIVRRLL 521
Query: 254 QITPAEKAAVQQSRHLKPIIDRINEDYSSVVK 285
++ P K ++ S HL + +E Y++ +K
Sbjct: 522 EVNP--KYSI-VSWHLLVLCVSCSEQYAAGIK 550
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 30.3 bits (65), Expect = 0.34
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 9/112 (8%)
Query: 135 MEASIHHKEKGVELV-KEKRILDAFRRFSKALKMVVAXXXXXXXXXXXXKAVAITDLKVK 193
M A +++ EL K+K I +AF + K + + A A+
Sbjct: 9 MNAGTESQQEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAI-------- 60
Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEA 245
Y+N A +Q E+E AL ++ + P+ K R AY GL + EA
Sbjct: 61 YYSNRAATYMQIGEFELALCDAKQSDRIKPDVPKTQSRIRQAYEGLSILNEA 112
>SPBC32H8.06 |mug93||TPR repeat protein, meiotically
spliced|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 30.3 bits (65), Expect = 0.34
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVL 253
+Y + + L+ Y + C A+ +P + K ++RR LAY L A D + L
Sbjct: 43 VYADSSLTHLRKKSYTKVVHDCTYALVINPYDKKVIWRRGLAYLRLGHPHLANRDWEHSL 102
Query: 254 QITPAEKAAVQQSRH 268
++ P +Q+S H
Sbjct: 103 ELDP-NNTYIQKSLH 116
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.7 bits (61), Expect = 1.0
Identities = 22/97 (22%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVL 253
L LA +++ + L +CN ++ V L +L T ++ ++A D+ +
Sbjct: 749 LQEQLASKKIEVQNVSSQLSICNSQLEQSNHIVDNLKSENLLLTSVKDKLKA--DLSNL- 805
Query: 254 QITPAEKAAVQQSR-HLKPIIDRINEDYSSVVKKMFS 289
++ +++QQ H+K I+ N++Y++ V M S
Sbjct: 806 ---ESKLSSLQQDNFHMKAQIESSNQEYTATVDSMNS 839
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 106 ELVKEISCDVELKEVTEEQLISDWSWERLMEASIHHKEK------GVELVKEKR 153
E +K++S +EL+++ EQ + E+L A EK VE++KE++
Sbjct: 221 ESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEK 274
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 204 QYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYV-EAWADIQRVLQITP 257
Q N+Y+ ALD +RAI+ +P + Y Y + +A QR ++ P
Sbjct: 630 QINQYQDALDAYSRAIRLNPYISEVWYDLGTLYESCHNQISDALDAYQRAAELDP 684
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 193 KLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRV 252
K+ L EYE + D +A++ +P N + A T E EA + R
Sbjct: 439 KVQAGLGIIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRA 498
Query: 253 LQITP 257
+ + P
Sbjct: 499 VSLQP 503
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 220 KYDPENVKALYRRSLAYTG-LEMYVEAWADIQRVLQITPAEKAAVQQSRHLKPIIDRINE 278
K DP ++ L + +++ L+ Y E + + +LQ+ P + H+ I+ RIN
Sbjct: 464 KLDP--IRGLRSKLISFERFLQKYPE-YRENTILLQVAPESLQDSEHLPHISDIVTRINS 520
Query: 279 DYSSVVKK 286
YS++ +
Sbjct: 521 AYSNIASR 528
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 198 LAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQI 255
LA+C E+ AL NRAI+ DP A + ++ E Y ++ ++ +++
Sbjct: 437 LANCFSLQREHSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRV 494
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 215 CNRAIKYDPENVKALYRRSLAYTGLEMY 242
CN+AI+ DP KA R++ A L+ Y
Sbjct: 456 CNKAIELDPNFAKAYVRKAQALFMLKDY 483
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 5.5
Identities = 19/85 (22%), Positives = 35/85 (41%)
Query: 198 LAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQITP 257
+ H ++ AA++ A+ + ++ +A Y Y L+M+ A QR + P
Sbjct: 378 MGHEYVELKNTHAAIESYRLAVDVNRKDYRAWYGLGQTYEVLDMHFYALYYFQRATALRP 437
Query: 258 AEKAAVQQSRHLKPIIDRINEDYSS 282
++ Q + IDR E S
Sbjct: 438 YDQRMWQALGNCYEKIDRPQEAIKS 462
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 185 VAITDLKVKLYNNLAHCQLQYNEYEAALDLCN 216
+A LK LY N+ QL + Y++ +DL N
Sbjct: 479 LAAETLKKSLYKNVDQPQLLFQFYQSIMDLNN 510
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 192 VKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYR 231
+ L+ N+ C L+ EYE A + D N AL +
Sbjct: 466 IGLWYNMGVCYLELKEYEHAQQCMEAILIVDNSNTNALIK 505
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,241,527
Number of Sequences: 5004
Number of extensions: 49061
Number of successful extensions: 159
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 139
Number of HSP's gapped (non-prelim): 21
length of query: 289
length of database: 2,362,478
effective HSP length: 72
effective length of query: 217
effective length of database: 2,002,190
effective search space: 434475230
effective search space used: 434475230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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