Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000801-TA|BGIBMGA000801-PA|IPR001440|Tetratricopeptide
TPR_1, IPR013026|Tetratricopeptide region
(289 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 56 3e-08
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 50 3e-06
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 49 5e-06
SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019) 47 2e-05
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 38 0.007
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 38 0.010
SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20) 38 0.013
SB_55575| Best HMM Match : TPR_1 (HMM E-Value=2.4e-07) 38 0.013
SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10) 37 0.017
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 36 0.029
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 36 0.039
SB_23911| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.089
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_53145| Best HMM Match : TPR_1 (HMM E-Value=3.4e-08) 32 0.63
SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06) 32 0.63
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36) 32 0.63
SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05) 31 1.1
SB_23059| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_39440| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 31 1.5
SB_47299| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 29 4.4
SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013) 29 4.4
SB_21545| Best HMM Match : FerB (HMM E-Value=3.1e-30) 29 5.9
SB_13968| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26) 28 7.8
SB_26590| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-17) 28 7.8
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 59.7 bits (138), Expect = 3e-09
Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 142 KEKGVELVKEKRILDAFRRFSKALKMVVAXXXXXXXXXXXXKAVAITDLKVKLYNNLAHC 201
K+KG + K+ + A R+++ ++++ + A+ +K + N+A C
Sbjct: 975 KDKGTKFFKDGKYKIACRQYAVVIRVLEGYFDEE-------EEKAVDPIKCAGHLNIAAC 1027
Query: 202 QLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQITPAEKA 261
L+ + CN+A+ D EN+KAL+RR A L+ Y ++ D +VL++ P +
Sbjct: 1028 HLKLGNNFKCIKACNKALDIDKENIKALFRRGKALLNLKDYEKSKEDFTQVLELDPKNRE 1087
Query: 262 AVQQSRHLKPIIDRINEDYSSVVKKMFS 289
A +Q + I++ + +D+ KK++S
Sbjct: 1088 AREQLK----IVNGMLKDHHQKEKKLYS 1111
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 109 KEISCDVELKEVTEEQLISDWSWE----RLMEASIHHKEKGVELVKEKRILDAFRRFSKA 164
K++ ++EL V + +W+ + A +KE+G EL + + DA ++++A
Sbjct: 188 KDLIFEIELISVNKPGEYKKETWQMDPKEKLAAIPKYKEEGNELYVDGKYKDAAEKYAEA 247
Query: 165 LKMVVAXXXXXXXXXXXXKAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPE 224
L + + V + +K+ N + C+L EY + + ++ D +
Sbjct: 248 LGCL--EQLSIREKPGDEEWVKLDQMKIPFLLNFSQCKLLLGEYYEVIKHTSTVLEKDKD 305
Query: 225 NVKALYRRSLAYTGLEMYVEAWADIQRVLQITPA-EKAAVQQSRHLKPIIDRINEDYSSV 283
NVKAL+RR+ A+ EA +D +R ++ P+ K ++ L +I N +
Sbjct: 306 NVKALFRRAKAHKACWDPEEARSDFKRAAELDPSLTKVVRKEVSELDQMIKDHNAEDREK 365
Query: 284 VKKMFS 289
+KK+F+
Sbjct: 366 MKKLFA 371
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 49.6 bits (113), Expect = 3e-06
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 102 DGSGELVKEISCDVELKEVTEEQLISDWSWERLMEASIHHKEKGVELVKEK-----RILD 156
DG+G++ D ++ + ++ +L+ + + + + + K++ E+ K+K R LD
Sbjct: 273 DGTGDVYPNWPKDADI-DFSKVELVVEVAEKLKVIGNEQFKQQKYEVAKKKYKKALRYLD 331
Query: 157 AFRRFSKALKMVVAXXXXXXXXXXXXKAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCN 216
F+ + A + + + Y N A C+L+ EY +A++ CN
Sbjct: 332 EFQNSDSSDSDDEKEEEDETNKKVEDNAKKMAAIALPCYLNSAACKLKLAEYPSAIEDCN 391
Query: 217 RAIKYDPENVKALYRRSLAYTGLEMYVEA 245
A+K D + KAL+RR A ++ Y EA
Sbjct: 392 EALKLDANSAKALFRRGQANEHMKDYEEA 420
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 48.8 bits (111), Expect = 5e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 191 KVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQ 250
K +Y N A CQL+ +YEAA+ +A+ P + KAL+RRS A+ EA+ D +
Sbjct: 52 KAVIYKNRAACQLKLEKYEAAIKDATKALDIVPNDPKALFRRSQAFEATGRLEEAFKDAR 111
Query: 251 RVLQITP 257
+ + P
Sbjct: 112 TLSHLEP 118
>SB_50152| Best HMM Match : TPR_1 (HMM E-Value=0.0019)
Length = 94
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 195 YNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEA 245
Y N A C+L+ EY +A++ CN A+K D + KAL+RR A ++ Y EA
Sbjct: 43 YLNSAACKLKLAEYPSAIEDCNEALKLDANSAKALFRRGQANEHMKDYEEA 93
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 195 YNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQ 254
Y N + C L+ Y AL N+AI+ D + +K YRR+ A L + + D + V++
Sbjct: 224 YGNRSFCYLKTEYYGLALADANKAIQLDRKYIKGYYRRATANMALGKFKLSLKDYEMVVK 283
Query: 255 ITPAEKAAVQQSRHLKPIIDR 275
P++K A + K I+ R
Sbjct: 284 FHPSDKDAKAKYTECKKIVQR 304
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/63 (38%), Positives = 31/63 (49%)
Query: 193 KLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRV 252
K L HC L+ + A+ CN A+ D +V AL R+ AY EMY EA D Q+
Sbjct: 121 KARRQLCHCHLKLGFSQEAIKECNAALSIDENDVDALCDRAEAYILEEMYNEAVNDFQKA 180
Query: 253 LQI 255
I
Sbjct: 181 KSI 183
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 183 KAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMY 242
KA++I LY ++ Q + EAAL N+A+ DP+N + R+ ++ Y
Sbjct: 1460 KALSINPSSSVLYCHVGVVQHAMRKSEAALATINKAMLIDPKNPLCKFHRASILFSIDKY 1519
Query: 243 VEAWADIQRVLQITPAE 259
EA +++ + +I P E
Sbjct: 1520 QEALHELEDLKKIVPRE 1536
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/76 (25%), Positives = 31/76 (40%)
Query: 183 KAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMY 242
+AV + Y L H + E + A+ AI+ DP + A Y + Y E +
Sbjct: 1392 RAVQVDQACTYAYTLLGHEYVLTEELDRAMSCYRMAIRSDPRHYNAWYGVGMIYYKQEKF 1451
Query: 243 VEAWADIQRVLQITPA 258
A ++ L I P+
Sbjct: 1452 NLAEVHFRKALSINPS 1467
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 191 KVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQ 250
+++ N+ ++ + +E + A N A+ P+NVKALYRR+LA L Y A D+
Sbjct: 749 RLRRKNSSSYGSIPPSENDLAEKDANTALGLQPDNVKALYRRALARKALGKYDTAAKDLL 808
Query: 251 RVLQI 255
+++I
Sbjct: 809 SLVKI 813
>SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20)
Length = 1195
Score = 37.5 bits (83), Expect = 0.013
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVL 253
+Y + CQ + + ALD N AIK +P+ +A Y+R L L + + D R L
Sbjct: 1080 VYFLIGMCQSEVHNDSGALDAYNEAIKVNPDYAEAFYQRGLTKMKLS-HTKGVHDFNRAL 1138
Query: 254 QITP 257
I P
Sbjct: 1139 AINP 1142
>SB_55575| Best HMM Match : TPR_1 (HMM E-Value=2.4e-07)
Length = 112
Score = 37.5 bits (83), Expect = 0.013
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 217 RAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQITPAEKAAVQQSRHLKPIIDRI 276
+ + + PEN KALYRR AY L+ A DI + + P + + L + +
Sbjct: 36 QVLAHQPENAKALYRRGTAYINLKDLDRAQEDISKATNLQPNDAKIKRSQVLLVKELKKS 95
Query: 277 NEDYSSVVKKMFS 289
E + MFS
Sbjct: 96 TEKEKRTYEAMFS 108
>SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10)
Length = 452
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 193 KLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRV 252
+ Y + + ++ EY A+DL N++I P N + +R+ A+ L Y E+ D +
Sbjct: 285 RYYRSEGNKKMISKEYRTAIDLYNKSILASPINYFSWCQRATAFISLNKYEESLLDFEEC 344
Query: 253 LQITP 257
+++ P
Sbjct: 345 IKLNP 349
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 36.3 bits (80), Expect = 0.029
Identities = 22/92 (23%), Positives = 40/92 (43%)
Query: 183 KAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMY 242
KA+ Y N + + + Y+ AL+ +I+ D VK YR + + +
Sbjct: 59 KAIEFAPHVATFYGNRSAAYMMISNYDKALEDALLSIEIDNNFVKGHYRAAKCHLAMGSA 118
Query: 243 VEAWADIQRVLQITPAEKAAVQQSRHLKPIID 274
A +I++VL++ P K A + K + D
Sbjct: 119 SNALREIRKVLELDPKNKDARADMKSAKMVQD 150
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 183 KAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMY 242
+A+ + + + N ++C + ++E AL + AI P+ K +RR A GL+++
Sbjct: 294 QAIKLDARDFRFFGNRSYCFDRLGQFEKALQDADVAISLAPDWPKGFFRRGRALAGLKLF 353
Query: 243 VEAWADIQRVLQI 255
+A VL++
Sbjct: 354 SDAEGAFAHVLKL 366
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 208 YEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQITP 257
Y+AA++L +AIK D + + RS + L + +A D + + P
Sbjct: 285 YQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDADVAISLAP 334
>SB_23911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 34.7 bits (76), Expect = 0.089
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 203 LQYNEYEAALDL-CNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQITPA 258
LQ EY A + ++ + N+KALYRR+ AY L+ ++ DI++ LQ+ A
Sbjct: 129 LQLAEYHKAKGTEFFKVLQSEDTNIKALYRRAQAYLELDEIDKSREDIEKALQVDSA 185
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 68 VLIGDSDFFIDKDFELILQQMCSGETCEVNMVYRDGSGELVKEISCDVELKEVTEEQLIS 127
+ IG+ + + + L+ M +GETC V + L K+ + +EL + +
Sbjct: 67 ITIGEGNCDWSEMIDSCLESMHTGETCTVEERH-----PLEKDETLHLELLSFERAKDVW 121
Query: 128 DWSWERLMEASIHHKEKGVELVK 150
S L++ + +HK KG E K
Sbjct: 122 RLSASELLQLAEYHKAKGTEFFK 144
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 183 KAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLA 235
K + +T +L++N A C L+ N+ + AL C +K + KAL R++ A
Sbjct: 889 KGIELTKTDHRLFSNRALCHLKLNKPKEALADCESCLKLEEHFGKALQRKAWA 941
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 195 YNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRV 252
Y N A Q N++E ++ +A++ + + KAL RR+ A LE E D+ V
Sbjct: 183 YQNRAAAYEQMNQFENVVEEATKALELNSKYTKALMRRARALEKLERKQECLQDLTAV 240
>SB_53145| Best HMM Match : TPR_1 (HMM E-Value=3.4e-08)
Length = 200
Score = 31.9 bits (69), Expect = 0.63
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 185 VAITDLKVKLYNNLAH-CQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYV 243
+ +T K + + +AH C L N A+ +A D NV+AL ++ L+ Y
Sbjct: 120 IQVTQNKAEPWVAMAHFCNLT-NRKPRAVYFAQKAHTIDSHNVQALILKASLLQALDKYQ 178
Query: 244 EAWADIQRVLQITPAEKAAVQ 264
EA + ++++P+ AV+
Sbjct: 179 EALLHFREAVKLSPSNFEAVK 199
>SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06)
Length = 118
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 142 KEKGVELVKEKRILDAFRRFSKALKMVVAXXXXXXXXXXXXK-------AVAITDLKVKL 194
KE+G K+K +A +++ +A+ V + A I +L++
Sbjct: 36 KEEGNGCFKQKNYREAMKKYHRAMLYVRGLTDQPMPFSLSDRPLVSEELAAKILELELSC 95
Query: 195 YNNLAHCQLQYNEYEAALDLCNR 217
YNNLA C + + +D C +
Sbjct: 96 YNNLAACHFETGRWPKVVDYCKK 118
>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
Length = 1021
Score = 31.9 bits (69), Expect = 0.63
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 189 DLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVK 227
D V+ + A + + Y AL+LC +K DPENV+
Sbjct: 965 DATVRAFTRAATLECEAKRYYEALNLCVYGLKVDPENVE 1003
>SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05)
Length = 187
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 217 RAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQITPAEKAAVQQSRHLKPIIDRI 276
+ ++ DP+NVKAL+R+ EA I++ Q+ P K + R L+
Sbjct: 2 QVLQIDPDNVKALFRKGKVLASKGELSEALPLIKKANQLDPNNKTIRAELRSLRKRKSIQ 61
Query: 277 NEDYSSVVKKM 287
+E S+ ++M
Sbjct: 62 DEKERSMYQRM 72
>SB_23059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 208 YEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQITPAE 259
YE A C RA++ DP++V+A+ + +A +R +Q++P E
Sbjct: 76 YELAEKFCERALEIDPDHVEAIEMAGSVFLETGQPEKAVNCFRRAIQLSPDE 127
>SB_39440| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 244
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 191 KVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQ 250
+VK A ++ EY+ AL C A+K + N AL + T L +A A +
Sbjct: 5 EVKTLLKKARDSIRNKEYKDALKHCKAALKLEKNNYNALVFVGVCATELGQLEQAQAAYK 64
Query: 251 RVLQITPAEKAAVQQSRHLKPIIDRINED 279
+ P++ A Q + L+ +I + +ED
Sbjct: 65 KASDEDPSQVLAWQGADILEELI-KSSED 92
>SB_47299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/81 (24%), Positives = 36/81 (44%)
Query: 186 AITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMYVEA 245
AI + + + L Q + + AA+ NR + P N++AL +++ T M +A
Sbjct: 86 AILLFEAEAWQYLGTSQAENEQDIAAISALNRCVDLQPGNLEALMALAVSLTNESMQSQA 145
Query: 246 WADIQRVLQITPAEKAAVQQS 266
++ L+ P K V S
Sbjct: 146 CKTLKDWLRANPRYKDIVPPS 166
>SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 517
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAI 219
LY+N A C + ++++A D C RAI
Sbjct: 486 LYSNRAQCYINNRDWQSAADDCTRAI 511
>SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
Length = 158
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 194 LYNNLAHCQLQYNEYEAALDLCNRAI 219
LY+N A C + ++++A D C RAI
Sbjct: 127 LYSNRAQCYINNRDWQSAADDCTRAI 152
>SB_21545| Best HMM Match : FerB (HMM E-Value=3.1e-30)
Length = 1142
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 104 SGELVKEISCDVELKEVTEEQLISD-WSWERLMEASIHHKEKGVELVKEKR 153
S +L+ E+ D + +V EQL + W + + H KE+ ++LV+ +R
Sbjct: 247 SRKLIAELEIDED--DVYAEQLAKEGWEYAPMFTMKFHAKERKMDLVRRRR 295
>SB_13968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 28.7 bits (61), Expect = 5.9
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 191 KVKLYNNLAHCQLQYNEYEAALDLCNR 217
K KLY + H ++ N+Y +D C +
Sbjct: 679 KAKLYQQILHYHMEQNDYTNVIDTCKK 705
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/63 (23%), Positives = 31/63 (49%)
Query: 183 KAVAITDLKVKLYNNLAHCQLQYNEYEAALDLCNRAIKYDPENVKALYRRSLAYTGLEMY 242
+A+ + Y+N + + ++Y AL+ + ++ P+ K R AY+ L+MY
Sbjct: 34 EAILLDPANHVFYSNRSAAFAKLSKYNEALEDARKCVEIKPDWGKGYSRLGTAYSFLKMY 93
Query: 243 VEA 245
+A
Sbjct: 94 QKA 96
>SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26)
Length = 598
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 216 NRAIKYDPENVKALYRRSLAYTGLEMYVEAWADIQRVLQITP 257
+ A++ +P++ L RS YT L M+ EA D R++ P
Sbjct: 6 SEALEIEPDDEDVLGCRSAVYTKLGMFNEARKDADRLIANVP 47
>SB_26590| Best HMM Match : 7tm_1 (HMM E-Value=6.4e-17)
Length = 391
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 61 STNFDGNVLIGDSDFFIDKDF 81
STNF+ N +G+ DFF DF
Sbjct: 2 STNFEENCFLGEKDFFRSFDF 22
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,050,414
Number of Sequences: 59808
Number of extensions: 361649
Number of successful extensions: 888
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 847
Number of HSP's gapped (non-prelim): 40
length of query: 289
length of database: 16,821,457
effective HSP length: 81
effective length of query: 208
effective length of database: 11,977,009
effective search space: 2491217872
effective search space used: 2491217872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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