Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000800-TA|BGIBMGA000800-PA|IPR011012|Longin-like,
IPR000804|Clathrin adaptor complex, small chain
(142 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0662 + 5601147-5601176,5601419-5601517,5601601-5601651,560... 190 3e-49
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 159 8e-40
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 120 6e-28
03_02_0244 + 6750973-6751041,6751216-6751258,6751349-6751410,675... 79 1e-15
01_03_0243 + 14154122-14154190,14154373-14154415,14154491-141545... 74 4e-14
08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895 64 3e-11
03_06_0413 + 33756151-33756475,33756837-33756945,33757004-337570... 52 2e-07
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 39 0.001
01_06_1282 + 35972234-35972244,35972451-35972522,35972714-359727... 36 0.012
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 34 0.038
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 34 0.050
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 33 0.088
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 33 0.12
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 32 0.20
05_05_0116 - 22496535-22496576,22496974-22497058,22497468-224975... 30 0.62
11_08_0094 - 28314681-28314747,28315264-28315353,28315589-283157... 27 4.4
08_02_0433 - 17114880-17114972,17115053-17115149,17115244-171153... 27 7.6
07_01_0525 + 3904388-3904390,3904485-3904645,3905347-3905394,390... 27 7.6
>12_01_0662 +
5601147-5601176,5601419-5601517,5601601-5601651,
5602822-5602995,5603869-5603928,5604759-5604800
Length = 151
Score = 190 bits (464), Expect = 3e-49
Identities = 85/141 (60%), Positives = 110/141 (78%)
Query: 2 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRR 61
IRFIL+QNR GKTRLAK+Y+ +D EK K+ EVH +V RD K TNFVEFR K++YRR
Sbjct: 11 IRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYRR 70
Query: 62 YAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAG 121
YAGL+F +CVD+ DN L YLE IH FVE+L+ +F NVCELDLVFNF+KVY ++DE LAG
Sbjct: 71 YAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAG 130
Query: 122 EIRETSQTKVLKQLLMLNSLE 142
E++ETS+ +++++ L LE
Sbjct: 131 ELQETSKRAIIERMGELEKLE 151
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 159 bits (386), Expect = 8e-40
Identities = 67/132 (50%), Positives = 96/132 (72%)
Query: 2 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRR 61
I F+L+ +R GK RL KWY + E+ K+I E+ ++ R K NFVE++ +K+VYRR
Sbjct: 113 INFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGLILTRGPKLCNFVEWKGYKVVYRR 172
Query: 62 YAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAG 121
YA LYFC+C+D DN L LE IH+FVEVL+ YF +VCELDL+FNF+K Y ++DE+ +AG
Sbjct: 173 YASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAG 232
Query: 122 EIRETSQTKVLK 133
E++E+S+ V +
Sbjct: 233 ELQESSKKNVAR 244
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 120 bits (288), Expect = 6e-28
Identities = 56/137 (40%), Positives = 91/137 (66%)
Query: 2 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRR 61
IRF+++ N+ G+TR+A++Y + DE++ L E+ R +FVE RN+K+VYRR
Sbjct: 3 IRFVVMVNKQGQTRVAQYYEHLSVDERRALEGEIVRKCLARTDHQCSFVEHRNYKVVYRR 62
Query: 62 YAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAG 121
YA L+F + VD ++N L LE IH VE ++ +F NVCELD++F+ KV+ +++EM + G
Sbjct: 63 YASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFMLEEMVMNG 122
Query: 122 EIRETSQTKVLKQLLML 138
I ETS+ +L + ++
Sbjct: 123 CIVETSKQNILAPIHLM 139
>03_02_0244 +
6750973-6751041,6751216-6751258,6751349-6751410,
6751779-6751875,6752380-6752450,6752503-6752586,
6753040-6753294
Length = 226
Score = 79.4 bits (187), Expect = 1e-15
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF----- 55
MI+ +++ + GK RL K+Y ++ Q L+ V +++ R +NFV+
Sbjct: 1 MIQAVMVMSTQGKPRLLKFYSYQPPEKHQDLVRGVFQLLSARPDSVSNFVKVDAIFGPGA 60
Query: 56 KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
K+VY+ A LYF D ++N L L+ + FVE L+ F NVCELD+VFNF K
Sbjct: 61 KLVYKHLATLYFVFVFDSSENELAVLDLVQVFVETLDRCFKNVCELDIVFNFNK 114
>01_03_0243 +
14154122-14154190,14154373-14154415,14154491-14154552,
14155214-14155310,14157663-14157733,14158338-14158694
Length = 232
Score = 74.1 bits (174), Expect = 4e-14
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF----- 55
MI+ +++ + GK RL K+Y ++ Q+L+ V +++ R +NFV+
Sbjct: 1 MIQAVMVMSTQGKPRLLKFYSYHAPEKHQELVRAVFQLLSARPDSVSNFVKVDAIFGPGA 60
Query: 56 KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYK 109
K++Y+ A LY D ++N L L+ + FVE L+ F NVCEL +VFNF K
Sbjct: 61 KLIYKHLATLYLGFVFDGSENELAVLDLVQVFVETLDRCFKNVCELHIVFNFNK 114
>08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895
Length = 227
Score = 64.5 bits (150), Expect = 3e-11
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 48 NFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNV 98
+FVE RN+K+VYRRYA L+F + VD ++N L LE IH FVE ++ +F NV
Sbjct: 100 SFVEHRNYKVVYRRYASLFFLVGVDNDENELAILEFIHLFVETMDRHFGNV 150
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 79 CYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLML 138
C I++ + Y CELD++F+ KV+ +++EM + G I ETS+ +L + ++
Sbjct: 164 CKYAHIYHMGQADGNYPFGQCELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPIQLM 223
Score = 35.5 bits (78), Expect = 0.016
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 2 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEV 35
IRF+L N+ G+TRLA++Y + DE++ L E+
Sbjct: 3 IRFVLFVNKQGQTRLAQYYEHLSIDERRALEGEI 36
>03_06_0413 +
33756151-33756475,33756837-33756945,33757004-33757058,
33757059-33757094,33757196-33757282,33757737-33757808
Length = 227
Score = 52.0 bits (119), Expect = 2e-07
Identities = 20/44 (45%), Positives = 35/44 (79%)
Query: 98 VCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLNSL 141
VCELDL+FNF+K Y ++DE+ +AGE++E+++ VL+ + ++L
Sbjct: 164 VCELDLIFNFHKAYFILDEVLIAGELQESNKKAVLRLITTQDNL 207
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 58 VYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEM 117
++ + AGL+F + VN + LE + V +Y + E L NF VY ++DE+
Sbjct: 59 IHVKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNEDSLRKNFILVYELLDEV 118
Query: 118 FLAGEIRETSQTKVLKQLL 136
G +T+ T+VLK +
Sbjct: 119 IDFG-YPQTTSTEVLKSYI 136
>01_06_1282 +
35972234-35972244,35972451-35972522,35972714-35972747,
35973247-35973360,35974833-35975036,35975290-35975449,
35976093-35976240,35976345-35976422,35976854-35976938,
35977142-35977213
Length = 325
Score = 35.9 bits (79), Expect = 0.012
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 2 IRFILIQNRAGKTRLAKWYMNFDD----DEKQKLIEEVHAVVTVRDAK-HTNFVEFRNFK 56
++ IL+ + GK K+Y DD KQ + V A A+ V F ++
Sbjct: 151 VKNILVLDSEGKRVAVKYYS--DDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYF 208
Query: 57 IVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHN-VCELDLVFNFYKVYTVVD 115
+VY+ L+F + +N L + F E ++ N V + N ++ +D
Sbjct: 209 VVYKFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLD 268
Query: 116 EMFLAGEIRETSQTKVLKQL 135
E+ G + ET +L+++
Sbjct: 269 EVVDGGIVLETDAKAILEKV 288
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 34.3 bits (75), Expect = 0.038
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 74 NDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLK 133
N N L +H V+V YF + E L NF VY ++DEM G + T + K+L
Sbjct: 78 NCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQYT-EAKILS 136
Query: 134 QLL 136
+ +
Sbjct: 137 EFI 139
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 33.9 bits (74), Expect = 0.050
Identities = 28/136 (20%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 7 IQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLY 66
I +++GK +++ +++ + L+ +V K +VE N + VY+ GLY
Sbjct: 293 IISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGT--GKQHTYVETENVRYVYQPIEGLY 350
Query: 67 FCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRET 126
+ + N L L+ + +++ EY ++ E + +++ DE G +E
Sbjct: 351 LLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAFDEAISLGN-KEN 409
Query: 127 SQTKVLKQLLMLNSLE 142
+ +KQ + S E
Sbjct: 410 VTVQQVKQYCEMESHE 425
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 33.1 bits (72), Expect = 0.088
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 58 VYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLV-FNFYKVYTVVDE 116
+Y R + +Y I V N N C + + V + YF + D + NF +Y ++DE
Sbjct: 59 LYMRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDE 118
Query: 117 M 117
+
Sbjct: 119 I 119
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 32.7 bits (71), Expect = 0.12
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 76 NNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQL 135
N +C + + +VL +Y ++ E + NF VY ++DEM G T++ +LK++
Sbjct: 93 NMICDFQFLSRVADVLTDYLGDLNEDIIKDNFVLVYQILDEMMDNG-FPLTTEPNILKEM 151
Query: 136 L 136
+
Sbjct: 152 I 152
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 31.9 bits (69), Expect = 0.20
Identities = 17/44 (38%), Positives = 22/44 (50%)
Query: 74 NDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEM 117
N N L +H V+V YF + E L NF VY ++DEM
Sbjct: 79 NCNAASILLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 122
>05_05_0116 -
22496535-22496576,22496974-22497058,22497468-22497545,
22497656-22497803,22498612-22498771,22499056-22499058
Length = 171
Score = 30.3 bits (65), Expect = 0.62
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 2 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAK---HTNFVEFRNFKIV 58
++ IL+ + GK K+Y + KL E V + A V F +V
Sbjct: 7 VKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFDGHIVV 66
Query: 59 YRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYF-HNVCELDLVFNFYKVYTVVDEM 117
Y+ L+F + +N L + F + ++ +NV + + N + +DE+
Sbjct: 67 YKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILLCLDEI 126
Query: 118 FLAGEIRETSQTKVLKQL 135
G + ET + + +++
Sbjct: 127 VDGGIVLETEGSVIAEKV 144
>11_08_0094 -
28314681-28314747,28315264-28315353,28315589-28315725,
28317020-28317589
Length = 287
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 22 NFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIV 58
NF DE QK +E +H V++ K+ +F + +F IV
Sbjct: 218 NFPSDEGQKRLEHLHRVMS--HVKNLHFGDAHHFHIV 252
>08_02_0433 -
17114880-17114972,17115053-17115149,17115244-17115306,
17115765-17115918,17115992-17116178,17116567-17116871,
17117638-17117803,17118261-17118652,17119032-17119208,
17119565-17119604,17119762-17119809,17122393-17122428,
17122832-17123104
Length = 676
Score = 26.6 bits (56), Expect = 7.6
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 7 IQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLY 66
I +++GK +++ Y++ + L+ +V + K ++E N + VY+ GLY
Sbjct: 126 IISKSGKALVSRQYVDMTRIRIEGLLAAFPKLVG--NGKQHTYIETENVRYVYQPIEGLY 183
Query: 67 FCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVC-ELDLVFNFYK-VYTVVDEMFLA 120
+ V N NL H+ + +C ELDL NFY+ Y V LA
Sbjct: 184 --LVVITNKQNL------HSPLTTKGV----ICRELDLSVNFYECCYAFVVSYLLA 227
>07_01_0525 +
3904388-3904390,3904485-3904645,3905347-3905394,
3905714-3905902,3906872-3906977
Length = 168
Score = 26.6 bits (56), Expect = 7.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 43 DAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNN----LCYLEAIHNFVEVLNE 93
D K + K V RR++ + C D++ N +CY A+HN+VE E
Sbjct: 21 DGKQKIMFALTSIKGVGRRFSNIA-CKKADIDMNKRSGVVCYYLAVHNYVEWAGE 74
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.328 0.142 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,676,848
Number of Sequences: 37544
Number of extensions: 140537
Number of successful extensions: 445
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 427
Number of HSP's gapped (non-prelim): 21
length of query: 142
length of database: 14,793,348
effective HSP length: 75
effective length of query: 67
effective length of database: 11,977,548
effective search space: 802495716
effective search space used: 802495716
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 56 (26.6 bits)
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