GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000800-TA|BGIBMGA000800-PA|IPR011012|Longin-like,
IPR000804|Clathrin adaptor complex, small chain
         (142 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B prot...    23   3.9  
AY825824-1|AAV70387.1|  161|Anopheles gambiae heat shock protein...    23   5.1  
AY825823-1|AAV70386.1|  161|Anopheles gambiae heat shock protein...    23   5.1  

>AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B
          protein.
          Length = 107

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 10 RAGKTRLAKWYMNFDDDE 27
          RA   RLA+WY   DD E
Sbjct: 45 RATVDRLARWYDTVDDVE 62


>AY825824-1|AAV70387.1|  161|Anopheles gambiae heat shock protein
           DnaJ protein.
          Length = 161

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 68  CICVDVNDNNLCYLEAIHNFVEVLN 92
           C+ + +ND+N  Y +++ N   V N
Sbjct: 134 CVIMVLNDHNYVYKDSVFNPQHVCN 158


>AY825823-1|AAV70386.1|  161|Anopheles gambiae heat shock protein
           DnaJ protein.
          Length = 161

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 68  CICVDVNDNNLCYLEAIHNFVEVLN 92
           C+ + +ND+N  Y +++ N   V N
Sbjct: 134 CVIMVLNDHNYVYKDSVFNPQHVCN 158


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.142    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,914
Number of Sequences: 2123
Number of extensions: 6004
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56
Number of HSP's gapped (non-prelim): 3
length of query: 142
length of database: 516,269
effective HSP length: 58
effective length of query: 84
effective length of database: 393,135
effective search space: 33023340
effective search space used: 33023340
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 44 (21.8 bits)