Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000800-TA|BGIBMGA000800-PA|IPR011012|Longin-like,
IPR000804|Clathrin adaptor complex, small chain
(142 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g47830.1 68414.m05324 clathrin coat assembly protein, putativ... 194 3e-50
At4g35410.2 68417.m05030 clathrin adaptor complex small chain fa... 159 7e-40
At2g17380.1 68415.m02007 clathrin assembly protein AP19 identica... 158 1e-39
At4g35410.1 68417.m05029 clathrin adaptor complex small chain fa... 138 1e-33
At2g19790.1 68415.m02312 clathrin adaptor complex small chain fa... 120 3e-28
At3g50860.1 68416.m05569 clathrin adaptor complex small chain fa... 112 1e-25
At4g24550.2 68417.m03519 clathrin adaptor complexes medium subun... 39 0.001
At4g24550.1 68417.m03518 clathrin adaptor complexes medium subun... 39 0.001
At1g10730.1 68414.m01223 clathrin adaptor complexes medium subun... 38 0.003
At1g60780.1 68414.m06842 clathrin adaptor complexes medium subun... 37 0.005
At1g56590.1 68414.m06508 clathrin adaptor complexes medium subun... 35 0.024
At5g46630.2 68418.m05740 clathrin adaptor complexes medium subun... 34 0.042
At5g46630.1 68418.m05741 clathrin adaptor complexes medium subun... 34 0.042
At4g08520.1 68417.m01403 clathrin adaptor complex small chain fa... 33 0.074
At3g09800.1 68416.m01165 clathrin adaptor complex small chain fa... 32 0.17
At3g14570.1 68416.m01845 glycosyl transferase family 48 protein ... 29 1.2
At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to... 28 2.1
At5g05010.1 68418.m00532 clathrin adaptor complexes medium subun... 27 4.9
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain... 27 4.9
At3g09800.2 68416.m01166 clathrin adaptor complex small chain fa... 27 4.9
At2g15680.1 68415.m01795 calmodulin-related protein, putative si... 27 4.9
At2g44110.2 68415.m05486 seven transmembrane MLO family protein ... 27 6.4
At2g44110.1 68415.m05485 seven transmembrane MLO family protein ... 27 6.4
At5g15680.1 68418.m01834 expressed protein 26 8.5
At1g10240.1 68414.m01154 far-red impaired responsive protein, pu... 26 8.5
At1g06490.1 68414.m00688 glycosyl transferase family 48 protein ... 26 8.5
>At1g47830.1 68414.m05324 clathrin coat assembly protein, putative
similar to clathrin coat assembly protein AP17
GB:CAA65533 GI:2959358 from [Zea mays]; contains Pfam
profile: PF01217 clathrin adaptor complex small chain
Length = 142
Score = 194 bits (472), Expect = 3e-50
Identities = 85/142 (59%), Positives = 113/142 (79%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYR 60
MIRFIL+QNR GKTRLAK+Y+ ++ EK K+ EVH +V RDAK TNFVEFR K++YR
Sbjct: 1 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYR 60
Query: 61 RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
RYAGL+F +CVD+ DN L YLE+IH FVE+L+ +F NVCELDLVFNF+KVY ++DE LA
Sbjct: 61 RYAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA 120
Query: 121 GEIRETSQTKVLKQLLMLNSLE 142
GE++ETS+ +++++ L L+
Sbjct: 121 GELQETSKRAIIERMSELEKLQ 142
>At4g35410.2 68417.m05030 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 162
Score = 159 bits (386), Expect = 7e-40
Identities = 67/133 (50%), Positives = 97/133 (72%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYR 60
MI F+L+ +R GK RL KWY + E+ K+I E+ V+ R K NFVE+R +K+VY+
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60
Query: 61 RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
RYA LYFC+C+D DN L LE IH++VE+L+ YF +VCELDL+FNF+K Y ++DE+ +A
Sbjct: 61 RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
Query: 121 GEIRETSQTKVLK 133
GE++E+S+ V +
Sbjct: 121 GELQESSKKTVAR 133
>At2g17380.1 68415.m02007 clathrin assembly protein AP19 identical
to clathrin assembly protein AP19 GI:2231698 from
[Arabidopsis thaliana]
Length = 161
Score = 158 bits (384), Expect = 1e-39
Identities = 66/133 (49%), Positives = 97/133 (72%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYR 60
MI F+L+ +R GK RL KWY + E+ K+I E+ V+ R K NF+E+R +K+VY+
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYK 60
Query: 61 RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
RYA LYFC+C+D DN L LE IH++VE+L+ YF +VCELDL+FNF+K Y ++DE+ +A
Sbjct: 61 RYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
Query: 121 GEIRETSQTKVLK 133
GE++E+S+ V +
Sbjct: 121 GELQESSKKTVAR 133
>At4g35410.1 68417.m05029 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 124
Score = 138 bits (334), Expect = 1e-33
Identities = 59/110 (53%), Positives = 80/110 (72%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYR 60
MI F+L+ +R GK RL KWY + E+ K+I E+ V+ R K NFVE+R +K+VY+
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60
Query: 61 RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKV 110
RYA LYFC+C+D DN L LE IH++VE+L+ YF +VCELDL+FNF+KV
Sbjct: 61 RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKV 110
>At2g19790.1 68415.m02312 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 143
Score = 120 bits (290), Expect = 3e-28
Identities = 58/138 (42%), Positives = 93/138 (67%)
Query: 2 IRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRR 61
IRFIL+ N+ G+TRLA++Y +E++ L E+ R+ + +FVE RN+KIVYRR
Sbjct: 3 IRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRR 62
Query: 62 YAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAG 121
YA L+F + VD ++N L LE IH VE ++++F NVCELD++F+ K + +++EM + G
Sbjct: 63 YASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNG 122
Query: 122 EIRETSQTKVLKQLLMLN 139
I ETS+ +L + +++
Sbjct: 123 CIVETSKANILSPIQLMD 140
>At3g50860.1 68416.m05569 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 166
Score = 112 bits (269), Expect = 1e-25
Identities = 56/147 (38%), Positives = 92/147 (62%), Gaps = 5/147 (3%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNF----- 55
MI+ +++ N GK RLAK+Y +++Q+LI V +V+ R +NF+E +
Sbjct: 1 MIKAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDS 60
Query: 56 KIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVD 115
++VY+ YA LYF + D ++N L L+ I VE L++ F NVCELD+VFN+ K++ V+D
Sbjct: 61 RLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLD 120
Query: 116 EMFLAGEIRETSQTKVLKQLLMLNSLE 142
E+ G++ ETS +V+K + ++ LE
Sbjct: 121 EIVFGGQVLETSSAEVMKAVEEISKLE 147
>At4g24550.2 68417.m03519 clathrin adaptor complexes medium subunit
family protein contains Pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 451
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 61 RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
+ GLYF VN + LE + V+ +Y + E NF VY ++DE+
Sbjct: 63 KVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVIDF 122
Query: 121 GEIRETSQTKVLKQLL 136
G ++ TS T+VLK +
Sbjct: 123 GYVQTTS-TEVLKSYI 137
>At4g24550.1 68417.m03518 clathrin adaptor complexes medium subunit
family protein contains Pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 380
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 61 RYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLA 120
+ GLYF VN + LE + V+ +Y + E NF VY ++DE+
Sbjct: 63 KVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVIDF 122
Query: 121 GEIRETSQTKVLKQLL 136
G ++ TS T+VLK +
Sbjct: 123 GYVQTTS-TEVLKSYI 137
>At1g10730.1 68414.m01223 clathrin adaptor complexes medium subunit
family protein contains Pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 428
Score = 37.9 bits (84), Expect = 0.003
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 38 VVTVRDAKHTNFVEFRN-FKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFH 96
+ T D++ + V + N ++ +++ +Y I N N L +H V+V YF
Sbjct: 40 IETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFE 99
Query: 97 NVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLL 136
+ E L NF VY ++DEM G + ++ ++L + +
Sbjct: 100 ELEEESLRDNFVVVYELLDEMMDFG-YPQFTEARILSEFI 138
>At1g60780.1 68414.m06842 clathrin adaptor complexes medium subunit
family protein contains Pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 428
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 58 VYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEM 117
++ +++ +Y I N N L +H V+V YF + E L NF VY ++DEM
Sbjct: 61 MFVQHSNVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120
Query: 118 FLAGEIRETSQTKVLKQLL 136
G + T + ++L + +
Sbjct: 121 MDFGYPQYT-EARILSEFI 138
>At1g56590.1 68414.m06508 clathrin adaptor complexes medium subunit
family protein contains Pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 415
Score = 34.7 bits (76), Expect = 0.024
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 64 GLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEI 123
G+ F C V L +E + +VL+EY + E + NF VY ++DEM G
Sbjct: 64 GITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDNG-F 122
Query: 124 RETSQTKVLKQLL 136
T++ +LK+++
Sbjct: 123 PLTTEPSILKEMI 135
>At5g46630.2 68418.m05740 clathrin adaptor complexes medium subunit
family protein contains Pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 441
Score = 33.9 bits (74), Expect = 0.042
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 58 VYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLV-FNFYKVYTVVDE 116
VY R + +Y I V N N C + + V + YF + D + NF +Y ++DE
Sbjct: 59 VYMRISNVYIVIVVSSNANVACGFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDE 118
Query: 117 M 117
+
Sbjct: 119 I 119
>At5g46630.1 68418.m05741 clathrin adaptor complexes medium subunit
family protein contains Pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 438
Score = 33.9 bits (74), Expect = 0.042
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 58 VYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLV-FNFYKVYTVVDE 116
VY R + +Y I V N N C + + V + YF + D + NF +Y ++DE
Sbjct: 59 VYMRISNVYIVIVVSSNANVACGFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDE 118
Query: 117 M 117
+
Sbjct: 119 I 119
>At4g08520.1 68417.m01403 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 181
Score = 33.1 bits (72), Expect = 0.074
Identities = 30/141 (21%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE--VHAVVTVRDAKHTNFVEFRNFKIV 58
+++ IL+ + GK K+Y + KL E V + + +A+ + IV
Sbjct: 10 LVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLESNIV 69
Query: 59 YRRYA-GLYFCICVDVNDNNLCYLEAIHNFVEVLNEYF-HNVCELDLVFNFYKVYTVVDE 116
++A L+F + N+N L + F + + +NV +++ + N ++ +DE
Sbjct: 70 VYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFLCLDE 129
Query: 117 MFLAGEIRETSQTKVLKQLLM 137
M G + ET + ++ M
Sbjct: 130 MVDQGMVLETDANVIAGKVAM 150
>At3g09800.1 68416.m01165 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 179
Score = 31.9 bits (69), Expect = 0.17
Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE--VHAVVTVRDAKHTNFVEFRNFKI- 57
+++ IL+ + GK K+Y + KL E V + + +A+ + + I
Sbjct: 8 LVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNII 67
Query: 58 VYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFH-NVCELDLVFNFYKVYTVVDE 116
VY+ L+F + N+N L + F + + NV +++ + N ++ +DE
Sbjct: 68 VYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLDE 127
Query: 117 MFLAGEIRETSQTKVLKQLLM 137
M G + ET + ++ M
Sbjct: 128 MVDQGVVLETDPNVIAGKVAM 148
>At3g14570.1 68416.m01845 glycosyl transferase family 48 protein
contains similarity to glucan synthases
Length = 1973
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Query: 24 DDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCYLEA 83
+DDE+ ++ E T R TNFVE R+F ++R + ++ + + +
Sbjct: 476 EDDEELGVLSEEQPKPTSRWLGKTNFVETRSFWQIFRSFDRMWSFFVLSLQALIIMACHD 535
Query: 84 IHNFVEVLN-EYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLM 137
+ + ++V N F +V + + K+ + ++ + R T K+ L+
Sbjct: 536 VGSPLQVFNANIFEDVMSIFITSAILKLIKGILDIIFKWKARNTMPINEKKKRLV 590
>At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to
nitrate transporter (NTL1) GI:3377517 [Arabidopsis
thaliana]
Length = 585
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 49 FVEFRNFKIVYRRYAGLY---FCICVDVNDNNLCYLEAIHNFVEVLNEYFH 96
+ ++RN V R+ G+ F + V++ +N L YL N V L EY H
Sbjct: 13 YADWRNRAAVKGRHGGMLAASFVLVVEILEN-LAYLANASNLVLYLREYMH 62
>At5g05010.1 68418.m00532 clathrin adaptor complexes medium
subunit-related contains pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 527
Score = 27.1 bits (57), Expect = 4.9
Identities = 25/133 (18%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Query: 10 RAGKTRLAKWYMNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCI 69
++GK +++ Y++ + L+ +V + K ++E N + VY+ L+ +
Sbjct: 11 KSGKVIVSRHYVDMSRIRIEGLLAAFPKLVGM--GKQHTYIETENVRYVYQPIEALFLLL 68
Query: 70 CVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQT 129
N L L + +++ EY ++ E + +++ DE+ G +E+
Sbjct: 69 VTTKQSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELIFAFDEVISLGH-KESVTV 127
Query: 130 KVLKQLLMLNSLE 142
+KQ + S E
Sbjct: 128 AQVKQYCEMESHE 140
>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
protein contains Pfam profile PF00169: PH domain
Length = 1322
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 52 FRNFKIVYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELD 102
F +F I+ Y G +C+ ++ + YL + F++ + EYF + D
Sbjct: 1177 FTSFSIIDEDYEGFDYCLSGQFSEVRIVYL---NRFIQEVAEYFMGLVPSD 1224
>At3g09800.2 68416.m01166 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 138
Score = 27.1 bits (57), Expect = 4.9
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEKQKLIEE--VHAVVTVRDAKHTNFVEFRNFKI- 57
+++ IL+ + GK K+Y + KL E V + + +A+ + + I
Sbjct: 8 LVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNII 67
Query: 58 VYRRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFH-NVCELDLVFNFYKVYTVVDE 116
VY+ L+F + N+N L + F + + NV +++ + N ++ +DE
Sbjct: 68 VYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLDE 127
Query: 117 M 117
M
Sbjct: 128 M 128
>At2g15680.1 68415.m01795 calmodulin-related protein, putative
similar to calmodulin-related protein 2, touch-induced
SP:P25070 from [Arabidopsis thaliana]
Length = 187
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 28 KQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGL 65
+++ IE+V + D F++FR F Y+R G+
Sbjct: 80 QERAIEDVPKIFKAVDLDGDGFIDFREFIDAYKRSGGI 117
>At2g44110.2 68415.m05486 seven transmembrane MLO family protein /
MLO-like protein 15 (MLO15) identical to MLO-like
protein 15 (AtMlo15) SP:O80580 from [Arabidopsis
thaliana]; similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 497
Score = 26.6 bits (56), Expect = 6.4
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEK-QKLIEEVHAVVTVRDAKHTNFVEFRNFKIVY 59
++ FI + G++++AK ++ + EK + A +++D+ H F +
Sbjct: 62 LVGFISLLLSVGQSKIAKICISKELSEKFLPCTKPAGAEKSLKDSSHFQFSFTGRHLLAG 121
Query: 60 RRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKV 110
AG Y + V +L L +H F+ VL C L +VF K+
Sbjct: 122 DAPAGDYCSLKGKVPIMSLSALHELHIFIFVLAVAHIIFCLLTIVFGTMKI 172
>At2g44110.1 68415.m05485 seven transmembrane MLO family protein /
MLO-like protein 15 (MLO15) identical to MLO-like
protein 15 (AtMlo15) SP:O80580 from [Arabidopsis
thaliana]; similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 496
Score = 26.6 bits (56), Expect = 6.4
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 1 MIRFILIQNRAGKTRLAKWYMNFDDDEK-QKLIEEVHAVVTVRDAKHTNFVEFRNFKIVY 59
++ FI + G++++AK ++ + EK + A +++D+ H F +
Sbjct: 62 LVGFISLLLSVGQSKIAKICISKELSEKFLPCTKPAGAEKSLKDSSHFQFSFTGRHLLAG 121
Query: 60 RRYAGLYFCICVDVNDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKV 110
AG Y + V +L L +H F+ VL C L +VF K+
Sbjct: 122 DAPAGDYCSLKGKVPIMSLSALHELHIFIFVLAVAHIIFCLLTIVFGTMKI 172
>At5g15680.1 68418.m01834 expressed protein
Length = 2151
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 110 VYTVVDEMFLAGEIRETSQTKVLK 133
V ++VD +F G++RET T+ LK
Sbjct: 1667 VQSMVDAIFFQGDLRETWGTEALK 1690
>At1g10240.1 68414.m01154 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family
Length = 680
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 74 NDNNLCYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVY 111
+DNNL LEA+HN + L + F D + FY +
Sbjct: 34 DDNNLS-LEAVHNAIPYLGQIF---LTHDTAYEFYSTF 67
>At1g06490.1 68414.m00688 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1933
Score = 26.2 bits (55), Expect = 8.5
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 18 KWYMNFD------DDEKQKLIEEVHAVVTVRDAK-HTNFVEFRNFKIVYRRYAGLYFCIC 70
KW MNF DE ++ + H V+ K TNFVE R F +YR + ++ +
Sbjct: 448 KWPMNFKADFFIHTDEISQVPNQRHDQVSHGKRKPKTNFVEARTFWNLYRSFDRMWMFLV 507
Query: 71 VDVNDNNLCYLEAIHNFVEVLNE-YFHNVCELDLVFNFYKVYTVVDEMFLA 120
+ + + + + + E F NV + + F + ++ L+
Sbjct: 508 LSLQTMIIVAWHPSGSILAIFTEDVFRNVLTIFITSAFLNLLQATLDLVLS 558
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.328 0.142 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,239,123
Number of Sequences: 28952
Number of extensions: 129522
Number of successful extensions: 453
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 435
Number of HSP's gapped (non-prelim): 26
length of query: 142
length of database: 12,070,560
effective HSP length: 74
effective length of query: 68
effective length of database: 9,928,112
effective search space: 675111616
effective search space used: 675111616
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 55 (26.2 bits)
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