Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000799-TA|BGIBMGA000799-PA|undefined
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749... 37 0.039
06_03_0497 + 21424732-21424899,21424992-21425057,21425176-214256... 34 0.21
05_01_0360 + 2814139-2814627,2815203-2815334,2815480-2815583,281... 33 0.37
05_02_0003 + 5520331-5520476,5520572-5520644,5520762-5520928,552... 32 0.85
03_05_0411 - 23972738-23973606,23977701-23977794,23978487-239785... 32 1.1
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 31 1.5
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 31 1.5
09_02_0107 + 4354470-4354589,4355058-4355156,4355292-4355596,435... 29 6.0
08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036 29 6.0
07_03_0469 - 18487372-18487698 29 7.9
01_06_0845 - 32389889-32389909,32390074-32390241,32390334-323904... 29 7.9
>07_01_0893 +
7484598-7484744,7484837-7484902,7494387-7494530,
7494860-7495235,7495904-7496017,7496282-7496454,
7496562-7496669,7497311-7497377,7497791-7497904,
7498121-7498257,7498727-7498813,7498962-7498986,
7499044-7499266,7499770-7499947,7500039-7500152,
7500249-7500380,7500488-7500588,7500720-7500933
Length = 839
Score = 36.7 bits (81), Expect = 0.039
Identities = 22/96 (22%), Positives = 45/96 (46%)
Query: 221 STARKRSYTQSDAEDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKPKPN 280
++AR + +S + ++ + T + + + + S L+ P+R+V PSK K +
Sbjct: 502 TSARTPATKKSSQSSPNIEERQYSMTRIIDSLNASGNCSGTRHNLYRPKRIVHPSKYKSS 561
Query: 281 SQFNRTKLPNFAALHQKQFDKMESLDECQERKAKRA 316
N T+ +A ++ + S+ E Q+ K K A
Sbjct: 562 PYDNYTRHQTISAAELNHYNNILSIGETQQYKNKFA 597
>06_03_0497 +
21424732-21424899,21424992-21425057,21425176-21425634,
21425945-21426088,21426172-21426306,21426418-21426808,
21427256-21427428,21427508-21427615,21427715-21427810,
21427896-21428003,21428644-21428792,21428924-21428925,
21429071-21429207,21429538-21429842,21430922-21431099,
21431192-21431305,21431373-21431504,21431610-21431843
Length = 1032
Score = 34.3 bits (75), Expect = 0.21
Identities = 19/83 (22%), Positives = 40/83 (48%)
Query: 234 EDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKPKPNSQFNRTKLPNFAA 293
+ + + ++ + T + + + + S L+ P+R+V PSK K + N T+ +A
Sbjct: 735 QHVQTEERQYSMTRIIDSLNASGNCSGTRHNLYRPKRIVHPSKYKSSPYDNYTRHQTISA 794
Query: 294 LHQKQFDKMESLDECQERKAKRA 316
++ + S+ E Q+ K K A
Sbjct: 795 AELNHYNNILSIGETQQYKYKFA 817
>05_01_0360 +
2814139-2814627,2815203-2815334,2815480-2815583,
2816180-2816292,2818409-2818506,2818636-2818815,
2818893-2819114,2819270-2819404,2819489-2819771,
2819858-2819931,2820164-2820384,2820463-2820550,
2820651-2820744,2820827-2821015,2821369-2821400,
2821542-2821621,2821718-2821807,2821911-2821980,
2822240-2822285,2822370-2822428,2822588-2822753,
2822929-2823107,2823186-2823392,2823529-2823633,
2823701-2823703
Length = 1152
Score = 33.5 bits (73), Expect = 0.37
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 222 TARKRSYTQSDAEDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQ-RVVTPSKPKPN 280
TA + E+ +K VT+ +EP +R + S+ F R P+KP+
Sbjct: 808 TAELYDFDDDKDENKLDFKKLVTDNWIEPTSRRERKRNYSESDYFKQALRQGAPAKPR-- 865
Query: 281 SQFNRTKLPNFAALHQKQFDKMESLDECQERKAKRAKQLLTPTGSVG 327
++P LH QF + L+E E++ K Q +VG
Sbjct: 866 ----EPRIPRMPHLHDFQFFNTQRLNELYEKEVKYLVQANQKKDTVG 908
>05_02_0003 +
5520331-5520476,5520572-5520644,5520762-5520928,
5520929-5521223,5521531-5521674,5521756-5521890,
5522004-5522093,5523702-5523809,5523905-5523986,
5525362-5525417,5525888-5525986,5526090-5526394,
5526898-5527075,5527167-5527280,5527376-5527507,
5527614-5527718
Length = 742
Score = 32.3 bits (70), Expect = 0.85
Identities = 19/83 (22%), Positives = 40/83 (48%)
Query: 234 EDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKPKPNSQFNRTKLPNFAA 293
+ A+ + ++ + T + + + + L+ P+R+V SK K + N T+ F+A
Sbjct: 488 QHAQTEERQYSMTRIIDSLNASGNCCGTRHNLYRPKRIVHLSKYKSSPYDNYTRHQTFSA 547
Query: 294 LHQKQFDKMESLDECQERKAKRA 316
++ + S+ E Q+ K K A
Sbjct: 548 AELNHYNNILSIGETQQYKYKFA 570
>03_05_0411 -
23972738-23973606,23977701-23977794,23978487-23978549,
23979558-23979630,23980325-23980375,23980491-23980906,
23981066-23981396,23983165-23983223,23983799-23983975
Length = 710
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 391 NHTKASKLSKPNGLIRQATLPSLTGTTSTRKETAKQLVMREKSFTDKRTGKIQETRTVIK 450
N TK+S+ S + +++ L G+TS K +++ + + K DK+ + + K
Sbjct: 231 NRTKSSRSSSQSPFVKREQLSDSPGSTSVNKTKSREYMQKSKIEDDKKDVPLLKR----K 286
Query: 451 GVRTNRRFDL 460
RT RR +L
Sbjct: 287 NQRTGRRREL 296
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 31.5 bits (68), Expect = 1.5
Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 5/119 (4%)
Query: 27 RSERKVRNKLLNGNTDGSCINVIKC-KKRSNYVRYPTDDEQH----SADNDLDGIETKQS 81
+ +R+V + + D S N + +K+S +YP D +QH S ++ + S
Sbjct: 1131 KPQRQVSGETKSVAGDSSTHNTVDSERKKSAAAKYPGDSQQHSLSFSRQDNKSYVPPFLS 1190
Query: 82 RSTRKNTLKDRNTISVNNENTESFDAKKHVXXXXXXKKASESSIENVPVTENMYKREEH 140
ST ++ + + I N S K A+ S ++P + ++++H
Sbjct: 1191 GSTNDSSSRTLSLIGSEPSNAFSLGGKSANTSAPAATSAAAPSPSSIPQQQQQQQQQQH 1249
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 31.5 bits (68), Expect = 1.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 220 RSTARKRSYTQSDAEDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPS 275
R R RSY++S + R R + P +R S LS +P+R ++P+
Sbjct: 160 RGRGRSRSYSRSRSRSRSYSRSRSRSLSGSPRARRELERSRSLSYSRSPRRSISPA 215
>09_02_0107 +
4354470-4354589,4355058-4355156,4355292-4355596,
4356101-4356278,4356368-4356481,4356543-4356674,
4356784-4356888
Length = 350
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/83 (21%), Positives = 39/83 (46%)
Query: 234 EDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKPKPNSQFNRTKLPNFAA 293
+ A+ + ++ + + + + + S L+ +R+V PSK K + N T+ +A
Sbjct: 96 QHAQIEERQYSMIRIIDSLNASSNCSGTRHNLYRLKRIVHPSKYKSSPYDNYTRHQTISA 155
Query: 294 LHQKQFDKMESLDECQERKAKRA 316
++ + S+ E Q+ K K A
Sbjct: 156 AELNHYNNILSIGETQQYKYKFA 178
>08_01_0521 + 4540627-4540794,4541822-4541836,4541957-4543036
Length = 420
Score = 29.5 bits (63), Expect = 6.0
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 418 STRKETAKQLVMREKSFTDKRTGKIQETRTVIKGVRTNRRFDLQMRLRNL 467
STR K +M+EK+F + K++E + +RT ++ DL+ +++ L
Sbjct: 50 STRILLQKNGLMKEKAFNKEMKRKLEELKATTSSLRT-QKTDLKTKIKGL 98
>07_03_0469 - 18487372-18487698
Length = 108
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 220 RSTARKRSYTQSDAEDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKP 277
R AR+ + T++ A A + RV TA PA T SA A+ + P + P+ P
Sbjct: 3 RHAARRLATTRAAAAAAAGRSSRVLSTAEVPAEAATDSAFAEAWKKVAP-NIEAPATP 59
>01_06_0845 -
32389889-32389909,32390074-32390241,32390334-32390453,
32390982-32391068,32391149-32391217,32391448-32391510,
32391648-32391989,32392245-32392337,32392457-32392660,
32392910-32393154,32393249-32393414
Length = 525
Score = 29.1 bits (62), Expect = 7.9
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 14 NDSTVKDDVDITVRSERKVRNKLLNGNTDGSCINVIKCKKRSNYVRYPT-DDEQHSADND 72
NDS+ D + VR E KL+ T G I ++ K SN PT Q + D
Sbjct: 305 NDSS--SDEETHVRGEVGELKKLVK--TLGQRIEELENKGTSNGNSEPTMATSQRTFD-- 358
Query: 73 LDGIETKQSRSTRKNTLKDRNTISVNNENTESFDAKKH 110
DGIE R+ RKN + +++++N KKH
Sbjct: 359 -DGIEEGVVRTNRKNKRRCEEQQNMHHDNILDLCGKKH 395
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.124 0.336
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,309,582
Number of Sequences: 37544
Number of extensions: 369135
Number of successful extensions: 827
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 11
length of query: 468
length of database: 14,793,348
effective HSP length: 85
effective length of query: 383
effective length of database: 11,602,108
effective search space: 4443607364
effective search space used: 4443607364
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
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