Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000799-TA|BGIBMGA000799-PA|undefined
(468 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27302| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.092
SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7) 35 0.16
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 33 0.37
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 33 0.49
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.86
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.1
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 31 1.5
SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56) 31 2.0
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.6
SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35) 30 3.5
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 30 3.5
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 30 3.5
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.6
SB_52683| Best HMM Match : BCNT (HMM E-Value=3) 29 8.0
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 29 8.0
SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
>SB_27302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 35.5 bits (78), Expect = 0.092
Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 10 RSMSNDSTVKDDVDITVRSERKVRNKLLN-GNTDGSCINVIKCKKRSNYVRYPTDDEQHS 68
RS+SN++ ++ I R+ N + N NT+ + IN +N + + +S
Sbjct: 21 RSISNNNNNNNN-SINNRNNNNNNNSINNRNNTNNNSINNRNNNNNNNSINNRNNTNNNS 79
Query: 69 ADNDLDGIETKQSRSTRKNTLKDRNTISVNNENTESFDAKKHVXXXXXXKKASESSIENV 128
+N + + N++ +RN S+NN + + + + + SS N
Sbjct: 80 INNRNNNNNNNSINNCNNNSINNRNNNSINNRSNTN---NNSINNRSNTNRINSSS-NNN 135
Query: 129 PVTENMYKREEH 140
++N K +EH
Sbjct: 136 DNSDNKSKHQEH 147
>SB_36607| Best HMM Match : Vicilin_N (HMM E-Value=3.7)
Length = 567
Score = 34.7 bits (76), Expect = 0.16
Identities = 53/237 (22%), Positives = 92/237 (38%), Gaps = 18/237 (7%)
Query: 219 SRSTARKRSYTQSDAEDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKP- 277
+R +RK ++ +D +A R R + + +P K+ +AS K S+ Q PS+
Sbjct: 109 ARQASRKTKTSKPQDQDKQAARPR--QASRKPQDKQ--AASRKTSKPQDKQAARQPSRKT 164
Query: 278 ---KPNSQFNRTKLPNFAALHQKQFDKMESLDECQERKAKRAKQLLTPTGSVGVSEKISP 334
KP Q + + P A+ +K S + Q+++A A+Q T + P
Sbjct: 165 KTSKPQDQDKQAERPRQASRKKKTSKNKPSKMQDQDKQA--ARQASRKTSKPQDKQAARP 222
Query: 335 KASTTXXXXXXXXXXXXXXXNPYDFQV-NPESKPGYTRFGF---KLNMDINPFCVPTKNI 390
+ ++ P D Q P T+ K + + +
Sbjct: 223 RQASRKTKTSKPQAARQASRKPQDKQAARPRQASRKTKTNKPQEKDKQEQDKQAARKRQA 282
Query: 391 NHTKAS---KLSKPNGLIRQATLPSLTGTTSTRKETAKQLVMREKSFTDKRTGKIQE 444
++AS K SKP G +QA PS + K+ A++ R + K T K Q+
Sbjct: 283 RSSQASRKAKPSKPQGQAKQAARPSQDKSQDQDKQAARKRQARTSQASPK-TNKQQD 338
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 33.5 bits (73), Expect = 0.37
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 8/104 (7%)
Query: 52 KKRSNYVRYPTDDEQHSADNDLDGIETKQSRSTRKNTLKDRNTISVNNENTE--SFDAKK 109
KK+ + V+ ++++ DN +D S ST K LKD S N++N S A K
Sbjct: 89 KKQKDKVKPDNSEKENKQDNIIDS-----SGSTSKTHLKDTENTSQNSQNNPHPSTHAAK 143
Query: 110 HVXXXXXXKK-ASESSIENVPVTENMYKREEHXXXXXXXXXXHS 152
K + +SI+NVP T K H+
Sbjct: 144 ATGGIKENKSNKTTASIKNVPTTNGPSKTSRSTDGEESAGSTHT 187
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 33.1 bits (72), Expect = 0.49
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 11 SMSNDSTVKDDVDITVRSERKVRNKL-LNGNTDGSCINVIKCKKRSNYVRYPTDDEQHSA 69
S +N ST D + E K+ + L + +G + VI V PT DE+
Sbjct: 572 STTNVSTSSDKSVTSQLLEDKIGSALPTESDKNGKSVIVIASDANDKTVHSPTPDEKIKE 631
Query: 70 DNDLDGIETKQSR---STRKNTLKDRNTISVNNENTESFDAKK 109
LDG KQ+ ST+ +T D N NEN D K+
Sbjct: 632 LESLDGGSQKQTGSDVSTKMDTTSDLNVKIELNENLGIPDNKE 674
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 32.3 bits (70), Expect = 0.86
Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 2/116 (1%)
Query: 12 MSNDSTVKDDVDITVRSERKVRNKLLNGNTDGSCINVIKCKKRSNYVRYPTDDEQHSADN 71
++N+S ++ I RS N N + + N I + +N + + +S +N
Sbjct: 1721 INNNSINNNNSSINNRSNNHNNNNNSINNCNNN--NSINNRNNNNSINNRNNTNNNSINN 1778
Query: 72 DLDGIETKQSRSTRKNTLKDRNTISVNNENTESFDAKKHVXXXXXXKKASESSIEN 127
+ I S N+ N S+NN N+ + + + SSI N
Sbjct: 1779 NNSSINNNNSSINNNNSSIINNNSSINNNNSSINNNNSSIINNNSSNNNNNSSINN 1834
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 57 YVRYPTDDEQHSADNDLDGI--ETKQSRSTRKNTLKDRNT------ISVNNENTESFDAK 108
+V T +E +A L+G K +S+R TL R+ I++N +T+ FD K
Sbjct: 320 FVTMATQEEAQNAIQTLNGFMYTNKPLQSSRIRTLNRRSRLFKLHYINLNRRDTKPFDKK 379
Query: 109 KHVXXXXXXKKASESSIENVPVTENMYKREE 139
H KKAS+ + V K E
Sbjct: 380 SHSGYEVKAKKASKRDEQVTSVKSEESKATE 410
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 31.5 bits (68), Expect = 1.5
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 224 RKRSYTQSDAEDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKPK-PNSQ 282
R R T + E + R+R + E + R A+ Q TP + K N Q
Sbjct: 195 RARIETPEEGEKKKNSRRRQEQKTPEEGKNRKHQKKARTKNTRRGQEQKTPEEGKNKNHQ 254
Query: 283 FNRTKLPNFA--ALHQKQFDKMESLDECQERKAKRAKQLLTPTGSVGVSEKISPKAST 338
K P HQK+ ++E+ +E +++K R ++L T G + K KA T
Sbjct: 255 KQEQKTPEEGKNKNHQKR-ARIETPEEGKKKKNTR-RRLEQKTPEEGKNRKPQKKART 310
>SB_51557| Best HMM Match : Collagen (HMM E-Value=0.56)
Length = 697
Score = 31.1 bits (67), Expect = 2.0
Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 34 NKLLNGNTDGSCINVIKCKKRSNYVRYPTDDEQHSADNDLDGIETKQSRSTRKNTLKDRN 93
N + + NT + K + S + +D++ S+ D +G T ++ K T ++ +
Sbjct: 57 NGVYHTNTINDITLLGKKSRVSKHKAIECEDKEDSSSGDDEGENTPENMLL-KATQQEPS 115
Query: 94 TISVNNENTESFDAKKHVXXXXXXKKASESSIENVPVTENMYKREEH 140
S NNENT++ + K V +K +++ + N+ K H
Sbjct: 116 NGSRNNENTKTTERKSDVSDSLGDEKLKIKDLQS-SIHRNLVKLFHH 161
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 30.7 bits (66), Expect = 2.6
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 47 NVIKCKKRSNYVRYPTDDEQHSADNDLDGIETKQSRSTRKNTLKDRN--TISVNNE-NTE 103
+V K R + ++ + E D ++ ++ S K+ KD N +++++N+ N+E
Sbjct: 95 SVFMAKDRVSAIQSLCEYEDSIEDGEVKDDVNEKDDSNNKDETKDSNEGSLTISNDLNSE 154
Query: 104 SFDAKKHVXXXXXXKKASESSIENVPVTENMYKREE 139
D KKH KK + ++ +K+E+
Sbjct: 155 KKDKKKHKKHSKDKKKKKHKKEKKREKDKHKHKQEK 190
>SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)
Length = 1208
Score = 30.3 bits (65), Expect = 3.5
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 8 RIRSMSNDSTVKDDVDITVRSERKVRNKLLNGNTDGSCINVIKCKKRSNYVRYPTDDEQH 67
R+ S+S+DS + D+DI R RN + T+ I+ KRSN D +
Sbjct: 23 RLESLSSDSEGELDLDINSRISVTKRNLVKTPKTESQ----IRRSKRSNLKSSSESDNED 78
Query: 68 SADNDLDGIETKQSRSTRKNT 88
+ N+ + ++ TRK++
Sbjct: 79 NYSNNSSPKPSPKTPRTRKSS 99
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 30.3 bits (65), Expect = 3.5
Identities = 18/96 (18%), Positives = 42/96 (43%)
Query: 224 RKRSYTQSDAEDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKPKPNSQF 283
RK + S+A+++ ++R E + + + S AK+ + T + K ++
Sbjct: 1515 RKMAKAASEAKESLSQRSSELEMRLSVLQSQYESRLAKIEKELTEAKAEKEMTEKSKAEL 1574
Query: 284 NRTKLPNFAALHQKQFDKMESLDECQERKAKRAKQL 319
+ A L QF +++ Q++ ++ KQ+
Sbjct: 1575 EELQQKEKAGLGSNQFVAYREMEQLQQKLQQQQKQI 1610
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 30.3 bits (65), Expect = 3.5
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 219 SRSTARKRSYTQSDAEDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQ-RVVTPSKP 277
SR T+ KRS S + RK + + + KR+ S+K S +P+ + T SK
Sbjct: 117 SRKTSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPKRSPKTSSKSSPKTSPKTSLKTSSKT 176
Query: 278 KPNSQFNRTK 287
P + N ++
Sbjct: 177 SPKTSLNTSR 186
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 29.9 bits (64), Expect = 4.6
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 237 RAKRKRVTETAVEPARKRTFSASAKLSELFTP------QRVVTPSKPKPNSQFNRTKLPN 290
+A++ TE++ P + + AS ++ E + P VV K K + + ++ K+
Sbjct: 11 KARQSGETESSTFPEKPKEDGASTEIGEKYGPIDGDTNSFVVAQKKDKLSKRVDQGKV-- 68
Query: 291 FAALHQKQFDKMESLDECQERKAKRA 316
L ++Q ++E + E +++KAKR+
Sbjct: 69 IKKLSKRQRKRLEKIVEKKQKKAKRS 94
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.9 bits (64), Expect = 4.6
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 13 SNDSTVKDDVDITVRSERKVRNKLLNGNTDGSCINVIKCKKRSNYVRYPTDDEQHSADND 72
+ND +D D + NK + +T+ IN K ++ + DD + ++D
Sbjct: 66 TNDDNTNEDNDKNNNDDNN--NKTNDNDTNDENINDDNEKNTND--KNNNDDSNENTNDD 121
Query: 73 LDGIETKQSRSTRKNTLKDRNTISVNNENTESFDAKKH 110
D + + +KN KD+NT ++NT KKH
Sbjct: 122 ND--KNTNDDNDKKNDDKDKNTNDDFDDNTTDDIDKKH 157
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 38 NGNTDGSCINVIKCKKRSNYVRYPTDDEQHSADNDLDGIETKQSRSTRKNTLKDRNTISV 97
NGN D + N C NY + + DND + + + N D N +
Sbjct: 25 NGNNDSND-NGDNCDNNDNYDNNDNNGNNDNNDNDDNYDNNDNNDNNDNNDNNDNNDNND 83
Query: 98 NNENTESFD 106
NN+N ++ D
Sbjct: 84 NNDNNDNND 92
>SB_52683| Best HMM Match : BCNT (HMM E-Value=3)
Length = 225
Score = 29.1 bits (62), Expect = 8.0
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 16 STVKDDVDITVRSERKVRNKLLNGNTDGSCI------NVIKCKKRSNYV-RYPTDDEQHS 68
STV V T++ ++K + L I ++ K + Y+ RY D+
Sbjct: 29 STVPQSVPTTLKRQQKASAETLTRLNPKEPIKYKLDDDLEKKGSKDKYIDRY--DNHNDK 86
Query: 69 ADNDLDGIETKQSRSTRKNTLKDRNTISVNNENTESFD 106
D D D + + R+ R+++ D+N +NE ++D
Sbjct: 87 RDYDKDTYDQRDGRADRRDSYDDKNRRDYDNERDRNYD 124
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 29.1 bits (62), Expect = 8.0
Identities = 22/103 (21%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 219 SRSTARKRSYTQSDAEDARAKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKPK 278
SRS +RK+S ++S+++ + R R + +RK++ S ++ + R ++ S+ K
Sbjct: 312 SRSKSRKKSGSRSNSQSKQKSRSRSRSNS--QSRKKSSSKKSR-----SRSRSISQSRKK 364
Query: 279 PNSQFNRTKLPNFAALHQKQFDKMESLDECQERKAKRAKQLLT 321
S+ +R++ + + +K K + K +R++ +T
Sbjct: 365 VKSKKSRSRSHSNSPSRKKARSKKSRSRSLSKSKKRRSRSPIT 407
>SB_25160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.1 bits (62), Expect = 8.0
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 55 SNYVRYPTDDEQHSADNDLDGIETKQSRSTRKNTLKDRNTISVNNENTESFDAK 108
SN + + D+ +S +N + S+ + N D N+I+ NN N +S D K
Sbjct: 20 SNNINHNNSDKNNSNNNK------RNSKDSSNNKASDNNSINGNNNNNKSNDNK 67
>SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1569
Score = 29.1 bits (62), Expect = 8.0
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Query: 220 RSTARKRSYTQSDAEDAR-AKRKRVTETAVEPARKRTFSASAKLSELFTPQRVVTPSKPK 278
R+ A K+ ++ EDA+ A + V+P R T ASAK + +R T P
Sbjct: 1346 RNAANKKPIAATEVEDAQTAIEEEAPVEEVQPKRA-TGKASAKPTRSTRGKRSQTDEAPA 1404
Query: 279 PNSQFNRTKLPNFAALHQKQFDKMESLDECQERKAKRA 316
+ T+ AA + +E +E KA R+
Sbjct: 1405 EGEKPTSTRRGRKAAKKDISIEVIEEAVTAEEPKATRS 1442
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.124 0.336
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,051,345
Number of Sequences: 59808
Number of extensions: 498747
Number of successful extensions: 1602
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1579
Number of HSP's gapped (non-prelim): 38
length of query: 468
length of database: 16,821,457
effective HSP length: 85
effective length of query: 383
effective length of database: 11,737,777
effective search space: 4495568591
effective search space used: 4495568591
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
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